Contig 001838:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003K23Sequence190001838 (28)emb|CDP19007.1|1e-10unnamed protein product [Coffea canephora]688001838 (28)ref|XP_009626274.1|2e-135PREDICTED: chlorophyll a-b binding protein 36, chloroplastic [Nicotiana tomento
JMFF015P20Sequence529001838 (28)emb|CDP19007.1|8e-79unnamed protein product [Coffea canephora]228001838 (28)
JMFF035D15Sequence560001838 (28)emb|CDX98158.1|2e-54BnaC07g09400D [Brassica napus]708001838 (28)gb|AEW70716.1|360light harvesting chlorophyll a-b binding protein 2-1 [Phyllostachys edulis]
JMFF036A14Sequence528001838 (28)emb|CDP19007.1|1e-97unnamed protein product [Coffea canephora]774001838 (28)ref|XP_011100602.1|8e-156PREDICTED: chlorophyll a-b binding protein 5, chloroplastic [Sesamum indicum]
JMFF036G18Sequence560001838 (28)emb|CDP19007.1|3e-106unnamed protein product [Coffea canephora]341001838 (28)gb|ABW07803.1|4e-50chlorophyll A-B binding protein [Solenostemon scutellarioides]
JMFF042O15Sequence650001838 (28)emb|CDP19007.1|2e-128unnamed protein product [Coffea canephora]595001838 (28)ref|XP_011100602.1|2e-107PREDICTED: chlorophyll a-b binding protein 5, chloroplastic [Sesamum indicum]
JMFF046E04Sequence555001838 (28)emb|CDP19007.1|7e-106unnamed protein product [Coffea canephora]509001838 (28)ref|XP_011100602.1|8e-85PREDICTED: chlorophyll a-b binding protein 5, chloroplastic [Sesamum indicum]
JMFF046K23Sequence575001838 (28)emb|CDP19007.1|7e-111unnamed protein product [Coffea canephora]495001838 (28)ref|XP_011100602.1|7e-85PREDICTED: chlorophyll a-b binding protein 5, chloroplastic [Sesamum indicum]
JMFF051D13Sequence581001838 (28)emb|CDP19007.1|4e-107unnamed protein product [Coffea canephora]583001838 (28)ref|XP_011100602.1|8e-90PREDICTED: chlorophyll a-b binding protein 5, chloroplastic [Sesamum indicum]
JMFN002A01Sequence564001838 (28)emb|CDP19007.1|9e-111unnamed protein product [Coffea canephora]
JMFN006M01Sequence627001838 (28)emb|CDP19007.1|3e-128unnamed protein product [Coffea canephora]
JMFN011A04Sequence472001838 (28)gb|AHI85722.1|8e-77stress-induced protein 17, partial [Capsicum annuum]
JMFN011G23Sequence511001838 (28)emb|CDP19007.1|2e-95unnamed protein product [Coffea canephora]
JMFN030D13Sequence508001838 (28)emb|CDP19007.1|8e-79unnamed protein product [Coffea canephora]
JMFN034B24Sequence566001838 (28)emb|CDP19007.1|1e-113unnamed protein product [Coffea canephora]
JMFN042A10Sequence634001838 (28)ref|XP_009626274.1|6e-145PREDICTED: chlorophyll a-b binding protein 36, chloroplastic [Nicotiana tomento
JMFN046F23Sequence581001838 (28)emb|CDP19007.1|3e-117unnamed protein product [Coffea canephora]
JMFS109B10Sequence627001838 (28)ref|NP_001050586.1|3e-134Os03g0592500 [Oryza sativa Japonica Group] sp|Q10HD0.1|CB23_ORYSJ RecName: Full=
JMFS110A09Sequence627001838 (28)emb|CDP19007.1|3e-128unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF015P20- CTTTTTATTTCNCNATAATTTTGTATTTAATATT
                      ____________________________________________________________
consensus CTTTTTATTTCNCNATAATTTTGTATTTAATATT
 
. : . : . : . : . : . :
rJMFF015P20- TATATTCAAGTGTTGATAATATTTGATATGGAATATATCCCAAATAATAATAATAAGGAG
                      ____________________________________________________________
consensus TATATTCAAGTGTTGATAATATTTGATATGGAATATATCCCAAATAATAATAATAAGGAG
 
. : . : . : . : . : . :
rJMFF015P20- GAGGTTTGCATGGGCAAAAAGGGAAATGAAAAGGAGGAAACCATATTAACCCATAGAAGA
rJMFF046E04- CCATAGAAGA
rJMFF046K23- A
JMFN011A04+ CCATAGAAGA
rJMFF051D13- CCATAGAAGA
rJMFF042O15- CCATAGAAGA
                      ____________________________________________________________
consensus GAGGTTTGCATGGGCAAAAAGGGAAATGAAAAGGAGGAAACCATATTAACCCATAGAAGA
 
. : . : . : . : . : . :
rJMFF015P20- TAGTGGGATTTTGCATTACTTTAACNGGAACAGAAAGGTAAATTC
rJMFF046E04- TAGTGGGATTTTGCATTACTTTAACAGGAACAGAAAGGTAAATTCACATGCAGAAGAGGT
rJMFF046K23- TAGTGGGATTTTGCATTACTTTAACAGGAACAGAAAGGTAAATTCACATGCAGAAGAGGT
JMFN011A04+ TAGTGGGATTTTGCATTACTTTAACAGGAACAGAAAGGTAAATTCACATGCAGAAGAGGT
rJMFF051D13- TAGTGGGATTTTGCATTACTTTAACAGGAACAGAAAGGTAAATTCACATGCAGAAGAGGT
rJMFF042O15- TAGTGGGATTTTGCATTACTTTAACAGGAACAGAAAGGTAAATTCACATGCAGAAGAGGT
JMFS109B10+ AGGT
rJMFF003K23- GTGGGATTTTGCATTACTTTAACAGGAACAGAAAGGTAAATTCACATGCAGAAGAGGT
rJMFF035D15- AGTGGGATTTTGCATTACTTTAACAGGAACAGAAAGGTAAATTCACATGCAGAAGAGGT
rJMFF036A14- TGGGATTTTGCATTACTTTAACAGGAACAGAAAGGTAAATTCACATGCAGAAGAGGT
                      ____________________________________________________________
consensus TAGTGGGATTTTGCATTACTTTAACAGGAACAGAAAGGTAAATTCACATGCAGAAGAGGT
 
. : . : . : . : . : . :
rJMFF046E04- AATTAAGTAATGACATCACTCATGATCATCAGTGATTTCACTTTCCGGGTACAAAGTTTG
rJMFF046K23- AATTAAGTAATGACATCACTCATGATCATCAGTGATTTCACTTTCCGGGTACAAAGTTTG
JMFN011A04+ AATTAAGTAATGACATCACTCATGATCATCAGTGATTTCACTTTCCGGGTACAAAGTTTG
rJMFF051D13- AATTAAGTAATGACATCACTCATGATCATCAGTGATTTCACTTTCCGGGTACAAAGTTTG
rJMFF042O15- AATTAAGTAATGACATCACTCATGATCATCAGTGATTTCACTTTCCGGGTACAAAGTTTG
JMFS109B10+ AATTAAGTAATGACATCACTCATGATCATCAGTGATTTCACTTTCCGGGTACAAAGTTTG
rJMFF003K23- AATTAAGTAATGACATCACTCATGATCATCAGTGATTTCACTTTCCGGGTACAAAGTTTG
rJMFF035D15- AATTAAGTAATGACATCACTCATGATCATCAGTGATTTCACTTTCCGGGTACAAAGTTTG
JMFN042A10+ ATTTCACTTTCCGGGTACAAAGTTGN
rJMFF036A14- AATTAAGTAATGACATCACTCATGATCATCAGTGATTTCACTTTCCGGGTACAAAGTTTG
                      ____________________________________________________________
consensus AATTAAGTAATGACATCACTCATGATCATCAGTGATTTCACTTTCCGGGTACAAAGTTTG
 
. : . : . : . : . : . :
rJMFF046E04- TAGCATAAGCCCAAGCATTGTTAGCTACCGGGTCAGCAACGTGGTCGAAGAGGTTCTCAA
rJMFF046K23- TAGCATAAGCCCAAGCATTGTTAGCTACCGGGTCAGCAACGTGGTCGAAGAGGTTCTCAA
JMFN011A04+ TAGCATAAGCCCAAGCATTGTTAGCTACCGGGTCAGCAACGTGGTCGAAGAGGTTCTCAA
rJMFF051D13- TAGCATAAGCCCAAGCATTGTTAGCTACCGGGTCAGCAACGTGGTCGAAGAGGTTCTCAA
rJMFF042O15- TAGCATAAGCCCAAGCATTGTTAGCTACCGGGTCAGCAACGTGGTCGAAGAGGTTCTCAA
JMFS109B10+ TAGCATAAGCCCAAGCATTGTTAGCTACCGGGTCAGCAACGTGGTCGAAGAGGTTCTCAA
rJMFF003K23- TAGCATAAGCCCAAGCATTGTTAGCTACCGGGTCAGCAACGTGGTCGAAGAGGTTCTCAA
rJMFF035D15- TAGCATAAGCCCAAGCATTGTTAGCTACCGGGTCAGCAACGTGGTCGAAGAGGTTCTCAA
JMFN042A10+ TAGCATAAGCCCAAGCATTGTTAGCTACCGGGTCAGCAACGTGGTCGAAGAGGTTCTCAA
rJMFF036A14- TAGCATAAGCCCAAGCATTGTTAGCTACCGGGTCAGCAACGTGGTCGAAGAGGTTCTCAA
                      ____________________________________________________________
consensus TAGCATAAGCCCAAGCATTGTTAGCTACCGGGTCAGCAACGTGGTCGAAGAGGTTCTCAA
 
. : . : . : . : . : . :
rJMFF046E04- TCGGGCCCTTTCCGGTAACAATGGCCTGCACGAGAAACCCGAACATGGAGAACATAGCCA
rJMFF046K23- TCGGGCCCTTTCCGGTAACAATGGCCTGCACGAAGAACCCGAACATGGAGAACATAGCCA
JMFN011A04+ TCGGGCCCTTTCCGGTAACAATGGCCTGCACGAAGAACCCGAACATGGAGAACATAGCCA
rJMFF051D13- TCGGGCCCTTTCCGGTAACAATGGCCTGCACGAAGAACCCGAACATGGAGAACATAGCCA
rJMFF042O15- TCGGGCCCTTTCCGGTAACAATGGCCTGCACGAAGAACCCGAACATGGAGAACATAGCCA
rJMFF036G18- CA
JMFS109B10+ TCGGGCCCTTTCCGGTAACAATGGCCTGCACGAAGAACCCGAACATGGAGAACATAGCCA
rJMFF003K23- TCGGGCCCTTTCCGGTAACAATGGCCTGCACGAAGAACCCGAACATGGAGAACATAGCCA
rJMFF035D15- TCGGGCCCTTTCCGGTAACAATGGCCTGCACGAAGAACCCGAACATGGAGAACATAGCCA
JMFN042A10+ TCGGGCCCTTTCCGGTAACAATGGCCTGCACGAAGAACCCGAACATGGAGAACATAGCCA
rJMFF036A14- TCGGGCCCTTTCCGGTAACAATGGCCTGCACGAAGAACCCGAACATGGAGAACATAGCCA
                      ____________________________________________________________
consensus TCGGGCCCTTTCCGGTAACAATGGCCTGCACGAAGAACCCGAACATGGAGAACATAGCCA
 
. : . : . : . : . : . :
rJMFF046E04- AACGCCCGTTCTTCAGTTCCTTCACTTTCAGCTCCGCGAACGCCTCCGGGTCATCGGCCA
rJMFF046K23- AACGCCCGTTCTTCAGTTCCTTCACTTTCAGCTCCGCGAACGCCTCCGGGTCATCGGCCA
JMFN011A04+ AACGCCCGTTCTTCAGTTCCTTCACTTTCAGCTCCGCGAACGCCTCCGGGTCATCGGCCA
rJMFF051D13- AACGCCCGTTCTTCAGTTCCTTCACTTTCAGCTCCGCGAACGCCTCCGGGTCATCGGCCA
rJMFF042O15- AACGCCCGTTCTTCAGTTCCTTCACTTTCAGCTCCGCGAACGCCTCCGGGTCATCGGCCA
rJMFF036G18- AACGCCCGTTCTTCAGTTCCTTCACTTTCNGCTCCNCGAACGCCTCCGGGTCATCGGNCA
JMFS109B10+ AACGCCCGTTCTTCAGTTCCTTCACTTTCAGCTCCGCGAACGCCTCCGGGTCATCGGCCA
rJMFF003K23- AACGCCCGTTCTTCAGTTCCTTCACTTTCAGCTCCGCGAACGCCTCCGGGTCATCGGCCA
rJMFF035D15- AACGCCCGTTCTTCAGTTCCTTCACTTTCAGCTCCGCGAACGCCTCCGGGTCGAAGGCCA
JMFN042A10+ AACGCCCGTTCTTCAGTTCCTTCACTTTCAGCTCCGCGAACGCCTCCGGGTCATCGGCCA
rJMFF036A14- AACGCCCGTTCTTCAGTTCCTTCACTTTCAGCTCCGCGAACGCCTCCGGGTCATCGGCCA
                      ____________________________________________________________
consensus AACGCCCGTTCTTCAGTTCCTTCACTTTCAGCTCCGCGAACGCCTCCGGGTCATCGGCCA
 
. : . : . : . : . : . :
rJMFF046E04- ACCCCAGTGGGTCGAAGGCGCCGCCGGGGTACACCTTGTCCAGCCCCTCTCCGAGCGGGC
rJMFF046K23- ACCCCAGTGGGTCGAAGGCGCCGCCGGGGTACACCTTGTCCAGCCCCTCTCCGAGCGGGC
JMFN011A04+ ACCCCAGTGGGTCGAAGGCGCCGCCGGGGTACACCTTGTCCAGCCCCTCTCCGAGCGGGC
rJMFF051D13- ACCCCAGTGGGTCGAAGGCGCCGCCGGGGTACACCTTGTCCAGCCCCTCTCCGAGCGGGC
rJMFF042O15- ACCCCAGTGGGTCGAAGGCGCCGCCGGGGTACACCTTGTCCAGCCCCTCTCCGAGCGGGC
rJMFF036G18- ACCCCNGNGGGNCGAAGGCGCCGCCGGGGTACACCTTGTCCAGCCCCTCTNCGAGCGGGC
JMFS109B10+ ACCCCAGTGGGTCGAAGGCGCCGCCGGGGTACACCTTGTCCAGCCCCTCTCCGAGCGGGC
rJMFF003K23- ACCCCAGTGGGTCGAAGGCGCCGCCGGGGTACACCTTGTCCAGCCCCTCTCCGAGCGGGC
rJMFF035D15- ACCCCAGTGGGTCGAAGGCGCCGCCGGGGTACACCTTGTCCAGCCCCTCTCCGAGCGGGC
JMFN042A10+ ACCCCAGTGGGTCGAAGGCGCCGCCGGGGTACACCTTGTCCAGCCCCTCTCCGAGCGGGC
rJMFF036A14- ACCCCAGTGGGTCGAAGGCGCCGCCGGGGTACACCTTGTCCAGCCCCTCTCCGAGCGGGC
JMFS110A09+ CGAAGGCGCCGCCGGGGTACACCTTGTCCAGCCCCTCTCCGAGCGGGC
JMFN046F23+ GGGC
JMFN006M01+ CGAAGGCGCCGCCGGGGTACACCTTGTCCAGCCCCTCTCCGAGCGGGC
JMFF042O15+ TCGAAGGCGCCGCCGGGGTACACCTTGTCCAGCCCCTCTCCGAGCGGGC
                      ____________________________________________________________
consensus ACCCCAGTGGGTCGAAGGCGCCGCCGGGGTACACCTTGTCCAGCCCCTCTCCGAGCGGGC
 
. : . : . : . : . : . :
rJMFF046E04- CGCCGCCGACTCTGTATCCCTCCACGAACCCCATCAGCACCACCTGGGAAGCCCAGATGG
rJMFF046K23- CGCCGCCGACTCTGTATCCCTCCACGAACCCCATCAGCACCACCTGGGAAGCCCAGATGG
JMFN011A04+ CGCCGCCGACTCTGTATCCCTCCACGAACCCCATCAGCACCACCTGGGAAGCCCAGATGG
rJMFF051D13- CGCCGCCGACTCTGTATCCCTCCACGAACCCCATCAGCACCACCTGGGAAGCCCAGATGG
rJMFF042O15- CGCCGCCGACTCTGTATCCCTCCACGAACCCCATCAGCACCACCTGGGAAGCCCAGATGG
rJMFF036G18- CGCCGNCGACTCTGTATCCCTCCACGAACCCCATCAGCACCANCTGGGAAGCCNAGATGG
JMFS109B10+ CGCCGCCGACTCTGTATCCCTCCACGAACCCCATCAGCACCACCTGGGAAGCCCAGATGG
rJMFF003K23- CGCCGCCGACTCTGTATCCCTCCACGAACCCCATCAGCACCACCTGGGAAGCCCAGATGG
rJMFF035D15- CGCCGCCGACTCTGTATCCCTCCACGAACCCCATCAGCACCACCTGGGAAGCCCAGATGG
JMFN042A10+ CGCCGCCGACTCTGTATCCCTCCACGAACCCAATCAGCACCACCTGGGAAGCCCAGATGG
rJMFF036A14- CGCCGCCGACTCTGTATCCCTCCACGAACCCCATCAGCACCACCTGGGAAGCCCAGATGG
JMFS110A09+ CGCCGCCGACTCTGTATCCCTCCACGAACCCCATCAGCACCACCTGGGAAGCCCAGATGG
JMFN046F23+ CGCCGCCGACTCTGTATCCCTCCACGAACCCCATCAGCACCACCTGGGAAGCCCAGATGG
JMFN006M01+ CGCCGCCGACTCTGTATCCCTCCACGAACCCCATCAGCACCACCTGGGAAGCCCAGATGG
JMFF046K23+ CGAACCCCATCAGCACCACCTGGGAAGCCCAGATGG
JMFN034B24+ GTATCCCTCCACGAACCCCATCAGCACCACCTGGGAAGCCCAGATGG
JMFN002A01+ CGAACCCCATCAGCACCACCTGGGAAGCCCAGATGG
JMFF042O15+ CGCCGCCGACTCTGTATCCCTCCACGAACCCCATCAGCACCACCTGGGAAGCCCAGATGG
JMFF036G18+ GGAAGCCCAGATGG
JMFF046E04+ GGAAGCCCAGATGG
JMFF035D15+ GGGAAGCCCAGATGG
JMFF051D13+ CTGGGAAGCCCAGATGG
                      ____________________________________________________________
consensus CGCCGCCGACTCTGTATCCCTCCACGAACCCCATCAGCACCACCTGGGAAGCCCAGATGG
 
. : . : . : . : . : . :
rJMFF046E04- CCAGGATGCTCTGGGCGTGGATCAGGTTTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
rJMFF046K23- CCAGGATGCTCTGGGCGTGGATCAGGTTTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
JMFN011A04+ CCAGGATGCTCTGGGCGTGGATCAGGTTTGGGTTGCCCAA
rJMFF051D13- CCAGGATGCTCTGGGCGTGGATCAGGTTTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
rJMFF042O15- CCAGGATGCTCTGGGCGTGGATCAGGTTTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
rJMFF036G18- CNANGATGCTCTGGGNGNGGATNANGNTTGGGTTGCCCAAGTANNCCAATCCGCCCTCCN
JMFS109B10+ CCAGGATGCTCTGGGCGTGGATCAGGTTTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
rJMFF003K23- CCAGGATGCTCTGGGCGTGGATCAGGTTTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
rJMFF035D15- CCAGGATGCTCTGGGCGTGGATCAGGTTTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
JMFN042A10+ CCAGGATGCTCTGGGCGTGGATCAGGTTTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
rJMFF036A14- CCAGGATGCTCTGGGCGTGGATCAGGTTTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
JMFS110A09+ CCAGGATGCTCTGGGCGTGGATCAGGTTTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
JMFN046F23+ CCAGGATGCTCTGGGCGTGGATCAGGTTTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
JMFN006M01+ CCAGGATGCTCTGGGCGTGGATCAGGTTTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
JMFF046K23+ CCAGGATGCTCTGGGCGTGGATCAGGTTTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
JMFN034B24+ CCAGGATGCTCTGGGCGTGGATCAGGTTTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
JMFN002A01+ CCAGGATGCTCTGGGCGTGGATCAGGTTTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
JMFF042O15+ CCAGGATGCTCTGGGCGTGGATCAGGTTTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
JMFF036G18+ CCAGGATGCTCTGGGCGTGGATCAGGTTTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
JMFF046E04+ CCAGGATGCTCTGGGCGTGGATCAGGTTTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
JMFF035D15+ CCAGGATGCTCTGGGCGTGGATCAGGTTTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
JMFF051D13+ CCAGGATGCTCTGGGCGTGGATCAGGTTTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
JMFF015P20+ GGATCAGGTTTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
JMFN011G23+ TTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
JMFF036A14+ GGATCAGGTTTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
                      ____________________________________________________________
consensus CCAGGATGCTCTGGGCGTGGATCAGGTTTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
 
. : . : . : . : . : . :
rJMFF046E04- AGAAGATCTGGGCTCCC
rJMFF046K23- AGAAGATCTGGGCT
rJMFF051D13- AGAAGATCTGGGCTCCCGCCTTGAACCACACCGCC-T
rJMFF042O15- AGAAGATCTGGGCTCCCGCCTTGAACCACACCGCC-TCGCCGAACTTCACGCCGTTCTTC
rJMFF036G18- AGAANATCTGGGCTCCCGCCTTGAACCACACCGCC-TCGACGAACTTCACGCCGTTCTTC
JMFS109B10+ AGAAGATCTGGGCTCCCGCCTTGAACCACACCGCC-TCGCCGAACTTCACGCCGTTCTTC
rJMFF003K23- AGAAGATCTGGGCTCCCGCCTTGAACCACACCGCC-TCGCCGAACTTCACGCCGTTCTTC
rJMFF035D15- AGAAGATCTGGGCTCCCGCCTTGAACCACACCGCC-TCGCCGAACTTCACGCCGTTCTTC
JMFN042A10+ AGAAGATCTGGGCTCCCGCCTTGAACCACACCGCC-TCGCCGAACTTCACGCCGTTCTTC
rJMFF036A14- AGAAGATCTGGGCTCCCGCCTTGAACCACACCGCC-TCGCCGAACTTCACGCCGTTCTTC
JMFS110A09+ AGAAGATCTGGGCTCCCGCCTTGAACCACACCGCC-TCGCCGAACTTCACGCCGTTCTTC
JMFN046F23+ AGAAGATCTGGGCTCCCGCCTTGAACCACACCGCC-TCGCCGAACTTCACGCCGTTCTTC
JMFN006M01+ AGAAGATCTGGGCTCCCGCCTTGAACCACACCGCC-TCGCCGAACTTCACGCCGTTCTTC
JMFF046K23+ AGAAGATCTGGGCTCCCGCCTTGAACCACACCGCC-TCGCCGAACTTCACGCCGTTCTTC
JMFN034B24+ AGAAGATCTGGGCTCCCGCCTTGAACCACACCGCC-TCGCCGAACTTCACGCCGTTCTTC
JMFN002A01+ AGAAGATCTGGGCTCCCGCCTTGAACCACACCGCC-TCGCCGAACTTCACGCCGTTCTTC
JMFF042O15+ AGAAGATCTGGGCTCCCGCCTTGAACCACACCGCC-TCGCCGAACTTCACGCCGTTCTTC
JMFF036G18+ AGAAGATCTGGGCTCCCGCCTTGAACCACACCGCC-TCGCCGAACTTCACGCCGTTCTTC
JMFF046E04+ AGAAGATCTGGGCTCCCGCCTTGAACCACACCGCC-TCGCCGAACTTCACGCCGTTCTTC
JMFF035D15+ AGAAGATCTGGGCTCCCGCCTTGAACCACACCGCC-TCGCCGAACTTCACGCCGTTCTTC
JMFF051D13+ AGAAGATCTGGGCTCCCGCCTTGAACCACACCGCC-TCGCCGAACTTCACGCCGTTCTTC
JMFF015P20+ AGAAGATCTGGGCTCCCGCCTTGAACCACACCGCCTTCGCCGAACTTCACGCCGTTCTTC
JMFN011G23+ AGAAGATCTGGGCTCCCGCCTTGAACCACACCGCC-TCGCCGAACTTCACGCCGTTCTTC
JMFF036A14+ AGAAGATCTGGGCTCCCGCCTTGAACCACACCGCC-TCGCCGAACTTCACGCCGTTCTTC
JMFN030D13+ CGCC-TCGCCGAACTTCACGCCGTTCTTC
                      ____________________________________________________________
consensus AGAAGATCTGGGCTCCCGCCTTGAACCACACCGCC-TCGCCGAACTTCACGCCGTTCTTC
 
. : . : . : . : . : . :
rJMFF042O15- GACAGGATTTCCGGGAACACGCAGCCCAGAGCGCCCAGCATGGC
rJMFF036G18- NANAGGATTTCCNGGAACACGCAG
JMFS109B10+ GACAGGATTTCCGGGAACACGCAGCCCAGAGCGCCCAGCATGGCCCACCGGGAGTGGATC
rJMFF003K23- GACAGGATTTCCGGGAACACGCAGCCCAGAGCGCCCAGCATGGCCCACCGGGAGTGGATC
rJMFF035D15- GACAGGATTTCCGGGAACACGCAGCCCAGAGCGCCCAGCATGGCCCACCGGGAGTGGATC
JMFN042A10+ GACAGGATTTCCGGGAACACGCAGCCCAGAGCGCCCAGCATGGCCCACCGGGAGTGGATC
rJMFF036A14- GACAGGATTTCCGGGAACACGCAGCCCAGAGCGCCCAGCATGGCCCACCGGGAGTGGATC
JMFS110A09+ GACAGGATTTCCGGGAACACGCAGCCCAGAGCGCCCAGCATGGCCCACCGGGAGTGGATC
JMFN046F23+ GACAGGATTTCCGGGAACACGCAGCCCAGAGCGCCCAGCATGGCCCACCGGGAGTGGATC
JMFN006M01+ GACAGGATTTCCGGGAACACGCAGCCCAGAGCGCCCAGCATGGCCCACCGGGAGTGGATC
JMFF046K23+ GACAGGATTTCCGGGAACACGCAGCCCAGAGCGCCCAGCATGGCCCACCGGGAGTGGATC
JMFN034B24+ GACAGGATTTCCGGGAACACGCAGCCCAGAGCGCCCAGCATGGCCCACCGGGAGTGGATC
JMFN002A01+ GACAGGATTTCCGGGAACACGCAGCCCAGAGCGCCCAGCATGGCCCACCGGGAGTGGATC
JMFF042O15+ GACAGGATTTCCGGGAACACGCAGCCCAGAGCGCCCAGCATGGCCCACCGGGAGTGGATC
JMFF036G18+ GACAGGATTTCCGGGAACACGCAGCCCAGAGCGCCCAGCATGGCCCACCGGGAGTGGATC
JMFF046E04+ GACAGGATTTCCGGGAACACGCAGCCCAGAGCGCCCAGCATGGCCCACCGGGAGTGGATC
JMFF035D15+ GACAGGATTTCCGGGAACACGCAGCCCAGAGCGCCCAGCATGGCCCACCGGGAGTGGATC
JMFF051D13+ GACAGGATTTCCGGGAACACGCAGCCCAGAGCGCCCAGCATGGCCCACCGGGAGTGGATC
JMFF015P20+ GACAGGATTTCCGGGAACACGCAGCCCAGAGCGCCCAGCATGGCCCACCGGGAGTGGATC
JMFN011G23+ GACAGGATTTCCGGGAACACGCAGCCCAGAGCGCCCAGCATGGCCCACCGGGAGTGGATC
JMFF036A14+ GACAGGATTTCCGGGAACACGCAGCCCAGAGCGCCCAGCATGGCCCACCGGGAGTGGATC
JMFN030D13+ GACAGGATTTCCGGGAACACGCAGCCCAGAGCGCCCAGCATGGCCCACCGGGAGTGGATC
                      ____________________________________________________________
consensus GACAGGATTTCCGGGAACACGCAGCCCAGAGCGCCCAGCATGGCCCACCGGGAGTGGATC
 
. : . : . : . : . : . :
JMFS109B10+ ACCTCCAGCTCGCGGTTCCTGGCGAAGGTCTCTGGGTCCGCTGAAAGCCCGGCAGTGTCC
rJMFF003K23- ACCTCCAGCTCGCGGTTCCTGGCGAAGGTCTCTGGGTCCGCTGAAAGCCCGGCAGTGTCC
rJMFF035D15- ACCTCCAGCTCGCGGTTCCTGGCGAANGTCTCTGGGTCCGCTGAAAG-CCGGCAGTGTCC
JMFN042A10+ ACCTCCAGCTCGCGGTTCCTGGCGAAGGTCTCTGGATCCGCTGAAAGCCCGGCAGTGTCC
rJMFF036A14- ACCTCCAGCTCGCGGTTCCTGGCGAAGGTCTCTGGGTCCGCTGAAAGCCCGGCAGTGTCC
JMFS110A09+ ACCTCCAGCTCGCGGTTCCTGGCGAAGGTCTCTGGGTCCGCTGAAAGCCCGGCAGTGTCC
JMFN046F23+ ACCTCCAGCTCGCGGTTCCTGGCGAAGGTCTCTGGGTCCGCTGAAAGCCCGGCAGTGTCC
JMFN006M01+ ACCTCCAGCTCGCGGTTCCTGGCGAAGGTCTCTGGGTCCGCTGAAAGCCCGGCAGTGTCC
JMFF046K23+ ACCTCCAGCTCGCGGTTCCTGGCGAAGGTCTCTGGGTCCGCTGAAAGCCCGGCAGTGTCC
JMFN034B24+ ACCTCCAGCTCGCGGTTCCTGGCGAAGGTCTCTGGGTCCGCTGAAAGCCCGGCAGTGTCC
JMFN002A01+ ACCTCCAGCTCGCGGTTCCTGGCGAAGGTCTCTGGGTCCGCTGAAAGCCCGGCAGTGTCC
JMFF042O15+ ACCTCCAGCTCGCGGTTCCTGGCGAAGGTCTCTGGGTCCGCTGAAAGCCCGGCAGTGTCC
JMFF036G18+ ACCTCCAGCTCGCGGTTCCTGGCGAAGGTCTCTGGGTCCGCTGAAAGCCCGGCAGTGTCC
JMFF046E04+ ACCTCCAGCTGGCGGTTCCTGGCGAAGGTCTCTGGGTCCGCTGAAAGCCCGGCAGTGTCC
JMFF035D15+ ACCTCCAGCTCGCGGTTCCTGGCGAAGGTCTCTGGGTCCGCTGAAAG-CCGGCAGTGTCC
JMFF051D13+ ACCTCCAGCTCGCGGTTCCTGGCGAAGGTCTCTGGGTCCGCTGAAAGCCCGGCAGTGTCC
JMFF015P20+ ACCTCCAGCTCGCGGTTCCTGGCGAAGGTCTCTGGGTCCGCTGAAAGCCCGGCAGTGTCC
JMFN011G23+ ACCTCCAGCTCGCGGTTCCTGGCGAAGGTCTCTGGGTCCGCTGAAAGCCCGGCAGTGTCC
JMFF036A14+ ACCTCCAGCTCGCGGTTCCTGGCGAAGGTCTCTGGGTCCGCTGAAAGCCCGGCAGTGTCC
JMFN030D13+ ACCTCCAGCTCGCGGTTCCTGGCGAAGGTCTCTGGGTCCGCTGAAAGCCCGGCAGTGTCC
                      ____________________________________________________________
consensus ACCTCCAGCTCGCGGTTCCTGGCGAAGGTCTCTGGGTCCGCTGAAAGCCCGGCAGTGTCC
 
. : . : . : . : . : . :
JMFS109B10+ CACCCGTAGTCGCCGGGGAACTCG
rJMFF003K23- CACCCGTAGTCGCCGGGGAACTCGCCGGTAA
rJMFF035D15- CACCCGTAGTCGCCGGGGAACTCGCCGGTAAGGTATGACGGAGTTTGCTCC
JMFN042A10+ CACCCGTAGTCGCCGGGGAACTCGCCGGTAAGGTATGACGGAGTTTGCTCCGAGAATGGG
rJMFF036A14- CACCCGTAGTCGCCGGGGAACTCGCCGGTAAGGTATGACGGAGTTTGCTCCGAGAATGGG
JMFS110A09+ CACCCGTAGTCGCCGGGGAACTCGCCGGTAAGGTATGACGGAGTTTGCTCCGAGAATGGG
JMFN046F23+ CACCCGTAGTCGCCGGGGAACTCGCCGGTAAGGTATGACGGAGTTTGCTCCGAGAATGGG
JMFN006M01+ CACCCGTAGTCGCCGGGGAACTCGCCGGTAAGGTATGACGGAGTTTGCTCCGAGAATGGG
JMFF046K23+ CACCCGTAGTCGCCGGGGAACTCGCCGGTAAGGTATGACGGAGTTTGCTCCGAGAATGGG
JMFN034B24+ CACCCGTAGTCGCCGGGGAACTCGCCGGTAAGGTATGACGGAGTTTGCTCCGAGAATGGG
JMFN002A01+ CACCCGTAGTCGCCGGGGAACTCGCCGGTAAGGTATGACGGAGTTTGCTCCGAGAATGGG
JMFF042O15+ CACCCGTAGTCGCCGGGGAACTCGCCGGTAAGGTATGACGGAGTTTGCTCCGAGAATGGG
JMFF036G18+ CACCCGTAGTCGCCGGGGAACTCGCCGGTAAGGTATGACGGAGTTTGCTCCGAGAATGGG
JMFF046E04+ CACCCGTAGTCGCCGGGGAACTCGCCGGTAAGGTATGACGGAGTTTGCTCCGAGAATGGG
JMFF035D15+ CACCCGTAGTCGCCGGGGAACTCGCCGGTAAGGTATGACGGAGTTTGCTCCGAGAATGGG
JMFF051D13+ CACCCGTAGTCGCCGGGGAACTCGCCGGTAAGGTATGACGGAGTTTGCTCCGAGAATGGG
JMFF015P20+ CACCCGTAGTCGCCGGGGAACTCGCCGGTAAGGTATGACGGAGTTTGCTCCGAGAATGGG
JMFN011G23+ CACCCGTAGTCGCCGGGGAACTCGCCGGTAAGGTATGACGGAGTTTGCTCCGAGAATGGG
JMFF036A14+ CACCCGTAGTCGCCGGGGAACTCGCCGGTAAGGTATGACGGAGTTTGCTCCGAGAATGGG
JMFN030D13+ CACCCGTAGTCGCCGGGGAACTCGCCGGTAAGGTATGACGGAGTTTGCTCCGAGAATGGG
                      ____________________________________________________________
consensus CACCCGTAGTCGCCGGGGAACTCGCCGGTAAGGTATGACGGAGTTTGCTCCGAGAATGGG
 
. : . : . : . : . : . :
JMFN042A10+ CCCAAGTAC
rJMFF036A14- CCCAAGTACTTGGGGCGGTCCGGGCCATACCANATGCTCTGGGG
JMFS110A09+ CCCAAGTACTTGGGGCGGTCCGGGCCATACCAGATGCTCTGGGGAGCACTTTTGACGGTA
JMFN046F23+ CCCAAGTACTTGGGGCGGTCCGGGCCATACCAGATGCTCTGGGGAGCACTTTTGACGGTA
JMFN006M01+ CCCAAGTACTTGGGGCGGTCCGGGCCATACCAGATGCTCTGGGGAGCACTTTTGACGGTA
JMFF046K23+ CCCAAGTACTTGGGGCGGTCCGGGCCATACCAGATGCTCTGGGGAGCACTTTTGACGGTA
JMFN034B24+ CCCAAGTACTTGGGGCGGTCCGGGCCATACCAGATGCTCTGGGGAGCACTTTTGACGGTA
JMFN002A01+ CCCAAGTACTTGGGGCGGTCCGGGCCATACCAGATGCTCTGGGGAGCACTTTTGACGGTA
JMFF042O15+ CCCAAGTACTTGGGGCGGTCCGGGCCATACCAGATGCTCTGGGGAGCACTTTTGACGGTA
JMFF036G18+ CCCAAGTACTTGGGGCGGTCCGGGCCATACCAGATGCTCTGGGGAGCACTTTTGACGGTA
JMFF046E04+ CCCAAGTACTTGGGGCGGTCCGGGCCATACCAGATGCTCTGGGGAGCACTTTTGACGGTA
JMFF035D15+ CCCAAGTACTTGGGGCGGTCCGGGCCATACCAGATGCTCTGGGGAGCACTTTTGACGGTA
JMFF051D13+ CCCAAGTACTTGGGGCGGTCCGGGCCATACCAGATGCTCTGGGGAGCACTTTTGACGGTA
JMFF015P20+ CCCAAGTACTTGGGGCGGTCCGGGCCATACCAGATGCTCTGGGGAGCACTTTTGACGGTA
JMFN011G23+ CCCAAGTACTTGGGGCGGTCCGGGCCATACCAGATGCTCTGGGGAGCACTTTTGACGGTA
JMFF003K23+ GTA
JMFF036A14+ CCCAAGTACTTGGGGCGGTCCGGGCCATACCAGATGCTCTGGGGAGCACTTTTGACGGTA
JMFN030D13+ CCCAAGTACTTGGGGCGGTCCGGGCCATACCAGATGCTCTGGGGAGCACTTTTGACGGTA
                      ____________________________________________________________
consensus CCCAAGTACTTGGGGCGGTCCGGGCCATACCAGATGCTCTGGGGAGCACTTTTGACGGTA
 
. : . : . : . : . : . :
JMFS110A09+ CGCCTCATGGTGAAGCGAGCACTGCCGGAGCTGCCGACCTTGCGGAGGAGATCGGTCTGG
JMFN046F23+ CGCCTCATGGTGAAGCGAGCACTGCCGGAGCTGCCGACCTTGCGGAGGAGATCGGTCTGG
JMFN006M01+ CGCCTCATGGTGAAGCGAGCACTGCCGGAGCTGCCGACCTTGCGGAGGAGATCGGTCTGG
JMFF046K23+ CGCCTCATGGTGAAGCGAGCACTGCCGGAGCTGCCGACCTTGCGGAGGAGATCGGTCTGG
JMFN034B24+ CGCCTCATGGTGAAGCGAGCACTGCCGGAGCTGCCGACCTTGCGGAGGAGATCGGTCTGG
JMFN002A01+ CGCCTCATGGTGAAGCGAGCACTGCCGGAGCTGCCGACCTTGCGGAGGAGATCGGTCTGG
JMFF042O15+ CGCCTCATGGTGAAGCGAGCACTGCCGGAGCTGCCGACCTTGCGGAGGAGATCGGTCTGG
JMFF036G18+ CGCCTCATGGTGAAGCGAGCACTGCCGGAGCTGCCGACCTTGCGGAGGAGATCGGTCTGG
JMFF046E04+ CGCCTCATGGTGAAGCGAGCACTGCCGGAGCTGCCGACCTTGCGGAGGAGATCGGTCTGG
JMFF035D15+ CGCCTCATGGTGAAGCGAGCACTGCCGGAGCTGCCGACCTTGCGGAGGAGATCGGTCTGG
JMFF051D13+ CGCCTCATGGTGAAGCGAGCACTGCCGGAGCTGCCGACCTTGCGGAGGAGATCGGTCTGG
JMFF015P20+ CGCCTCATGGTGAAGCGAGCACTGCCGGAGCTGCCGACCTTGCGGAGGAGATCGGTCTGG
JMFN011G23+ CGCCTCATGGTGAAGCGAGCACTGCCGGAGCTGCCGACCTTGCGGAGGAGATCGGTCTGG
JMFF003K23+ CGCCTCATGGTGAAGCGAGCACTGCCGGAGCTGCCGACCTTGCGGAGGAGATCGGTCTGG
JMFF036A14+ CGCCTCATGGTGAAGCGAGCACTGCCGGAGCTGCCGACCTTGCGGAGGAGATCGGTCTGG
JMFN030D13+ CGCCTCATGGTGAAGCGAGCACTGCCGGAGCTGCCGACCTTGCGGAGGAGATCGGTCTGG
                      ____________________________________________________________
consensus CGCCTCATGGTGAAGCGAGCACTGCCGGAGCTGCCGACCTTGCGGAGGAGATCGGTCTGG
 
. : . : . : . : . : . :
JMFS110A09+ GACTTCAAGGCACTCTGCCCAGCAAATGCTGATTGTTGGATACCGCAACTCGCCATTGAT
JMFN046F23+ GACTTCAAGGCACTCTGCCCAGCAAATGCTGATTGTTGGATACCGCAACTCGCCATTGAT
JMFN006M01+ GACTTCAAGGCACTCTGCCCAGCAAATGCTGATTGTTGGATACCGCAACTCGCCATTGAT
JMFF046K23+ GACTTCAAGGCACTCTGCCCAGCAAATGCTGATTGTTGGATACCGCAACTCGCCATTGAT
JMFN034B24+ GACTTCAAGGCACTCTGCCCAGCAAATGCTGATTGTTGGATACCGCAACTCGCCATTGAT
JMFN002A01+ GACTTCAAGGCACTCTGCCCAGCAAATGCTGATTGTTGGATACCGCAACTCGCCATTGAT
JMFF042O15+ GACTTCAAGGCACTCTGCCCAGCAAATGCTGATTGTTGGATACCGCAACTCGCCATTGAT
JMFF036G18+ GACTTCAAGGCACTCTGCCCAGCAAATGCTGATTGTTGGATACCGCAACTCGCCATTGAT
JMFF046E04+ GACTTCAAGGCACTCTGCCCAGCAAATGCTGATTGTTGGATACCGCAACTCGCCATTGAT
JMFF035D15+ GACTTCAAGGCACTCTGCCCAGCAAATGCTGATTGTTGGATACCGCAACTCGCCATTGAT
JMFF051D13+ GACTTCAAGGCACTCTGCCCAGCAAATGCTGATTGTTGGATACCGCAACTCGCCATTGAT
JMFF015P20+ GACTTCAAGGCACTCTGCCCAGCAAATGCTGATTGTTGGATACCGCAACTCGCCATTGAT
JMFN011G23+ GACTTCAAGGCACTCTGCCCAGCAAATGCTGATTGTTGGATACCGCAACTCGCCATTGAT
JMFF003K23+ GACTTCAAGGCACTCTGCCCAGCAAATGCTGATTGTTGGATACCGCAACTCGCCATTGAT
JMFF036A14+ GACTTCAAGGCACTCTGCCCAGCAAATGCTGATTGTTGGATACCGCAACTCGCCATTGAT
JMFN030D13+ GACTTCAAGGCACTCTGCCCAGCAAATGCTGATTGTTGGATACCGCAACTCGCCATTGAT
                      ____________________________________________________________
consensus GACTTCAAGGCACTCTGCCCAGCAAATGCTGATTGTTGGATACCGCAACTCGCCATTGAT
 
. : . : . : . : . : . :
JMFS110A09+ GATGATTCTTCTGCTCTTCTTAGCTTTCTGTTGGAGTTGA
JMFN046F23+ GATGATTCTTCTGCTCTTCTTAGCTTTCTGTTGGAGTT
JMFN006M01+ GATGATTCTTCTGCTCTTCTTAGCTTTCTGTTGGAGTTGA
JMFF046K23+ GATGATTCTTCTGCTCTTCTTAGCTTTCTGTTGGAGTTGATGGTATGCAGTTGCGAATGG
JMFN034B24+ GATGATTCTTCTGCTCTTCTTAGCTTTCTGTTGGAGTTGA
JMFN002A01+ GATGATTCTTCTGCTCTTCTTAGCTTTCTGTTGGAGTTGATGGTATGCA
JMFF042O15+ GATGATTCTTCTGCTCTTCTTAGCTTTCTGTTGGAGTTGATGGTATGCAGTTGCGAAAGG
JMFF036G18+ GATGATTCTTCTGCTCTTCTTAGCTTTCTGTTGGAGTTGATGGTATGCAGTTGCGAATGG
JMFF046E04+ GATGATTCTTCTGCTCTTCTTAGCTTTCTGTTGGAGTTGATGGTATGCAGTTGCGAATGG
JMFF035D15+ GATGATTCTTCTGCTCTTCTTAGCTTTCTGTTGGAGTTGATGGTATGCAGTTGCGAATGG
JMFF051D13+ GATGATTCTTCTGCTCTTCTTAGCTTTCTGTTGGAGTTGATGGTATGCAGTTGCGAATGG
JMFF015P20+ GATGATTCTTCTGCTCTTCTTAGCTTTCTGTTGGAGTTGATGGTATGCAGTTGCGAATGG
JMFN011G23+ GATGATTCTTCTGCTCTTCTTAGCTTTCTGTTGGAGTTGATGGTATGCAGTTG
JMFF003K23+ GATGATTCTTCTGCTCTTCTTAGCTTTCTGTTGGAGTTGATGGTATGCAGTTGCGAATGG
JMFF036A14+ GATGATTCTTCTGCTCTTCTTAGCTTTCTGTTGGAGTTGATGGTATGCAGTTGCGAATGG
JMFN030D13+ GATGATTCTTCTGCTCTTCTTAGCTTTCTGTTGGAGTTGATGGTATGCAGTTGCGAATGG
                      ____________________________________________________________
consensus GATGATTCTTCTGCTCTTCTTAGCTTTCTGTTGGAGTTGATGGTATGCAGTTGCGAATGG
 
. : . : . : . : . : . :
JMFF042O15+ AT
JMFF036G18+ ATGAAGT
JMFF046E04+ AT
JMFF035D15+ ATGAAGT
JMFF051D13+ ATGAAGT
JMFF015P20+ ATGAAGT
JMFF003K23+ ATGAAG
JMFF036A14+ ATGAAGT
JMFN030D13+ ATGAAGTGAATAGAAATCGGGGCGGGCGGAGTGTTATATATGGAAACTGGGATAGTTTGT
                      ____________________________________________________________
consensus ATGAAGTGAATAGAAATCGGGGCGGGCGGAGTGTTATATATGGAAACTGGGATAGTTTGT