| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF003K23 | Sequence | 190 | 001838 (28) | emb|CDP19007.1| | 1e-10 | unnamed protein product [Coffea canephora] | 688 | 001838 (28) | ref|XP_009626274.1| | 2e-135 | PREDICTED: chlorophyll a-b binding protein 36, chloroplastic [Nicotiana tomento |
| JMFF015P20 | Sequence | 529 | 001838 (28) | emb|CDP19007.1| | 8e-79 | unnamed protein product [Coffea canephora] | 228 | 001838 (28) | |||
| JMFF035D15 | Sequence | 560 | 001838 (28) | emb|CDX98158.1| | 2e-54 | BnaC07g09400D [Brassica napus] | 708 | 001838 (28) | gb|AEW70716.1| | 360 | light harvesting chlorophyll a-b binding protein 2-1 [Phyllostachys edulis] |
| JMFF036A14 | Sequence | 528 | 001838 (28) | emb|CDP19007.1| | 1e-97 | unnamed protein product [Coffea canephora] | 774 | 001838 (28) | ref|XP_011100602.1| | 8e-156 | PREDICTED: chlorophyll a-b binding protein 5, chloroplastic [Sesamum indicum] |
| JMFF036G18 | Sequence | 560 | 001838 (28) | emb|CDP19007.1| | 3e-106 | unnamed protein product [Coffea canephora] | 341 | 001838 (28) | gb|ABW07803.1| | 4e-50 | chlorophyll A-B binding protein [Solenostemon scutellarioides] |
| JMFF042O15 | Sequence | 650 | 001838 (28) | emb|CDP19007.1| | 2e-128 | unnamed protein product [Coffea canephora] | 595 | 001838 (28) | ref|XP_011100602.1| | 2e-107 | PREDICTED: chlorophyll a-b binding protein 5, chloroplastic [Sesamum indicum] |
| JMFF046E04 | Sequence | 555 | 001838 (28) | emb|CDP19007.1| | 7e-106 | unnamed protein product [Coffea canephora] | 509 | 001838 (28) | ref|XP_011100602.1| | 8e-85 | PREDICTED: chlorophyll a-b binding protein 5, chloroplastic [Sesamum indicum] |
| JMFF046K23 | Sequence | 575 | 001838 (28) | emb|CDP19007.1| | 7e-111 | unnamed protein product [Coffea canephora] | 495 | 001838 (28) | ref|XP_011100602.1| | 7e-85 | PREDICTED: chlorophyll a-b binding protein 5, chloroplastic [Sesamum indicum] |
| JMFF051D13 | Sequence | 581 | 001838 (28) | emb|CDP19007.1| | 4e-107 | unnamed protein product [Coffea canephora] | 583 | 001838 (28) | ref|XP_011100602.1| | 8e-90 | PREDICTED: chlorophyll a-b binding protein 5, chloroplastic [Sesamum indicum] |
| JMFN002A01 | Sequence | 564 | 001838 (28) | emb|CDP19007.1| | 9e-111 | unnamed protein product [Coffea canephora] | |||||
| JMFN006M01 | Sequence | 627 | 001838 (28) | emb|CDP19007.1| | 3e-128 | unnamed protein product [Coffea canephora] | |||||
| JMFN011A04 | Sequence | 472 | 001838 (28) | gb|AHI85722.1| | 8e-77 | stress-induced protein 17, partial [Capsicum annuum] | |||||
| JMFN011G23 | Sequence | 511 | 001838 (28) | emb|CDP19007.1| | 2e-95 | unnamed protein product [Coffea canephora] | |||||
| JMFN030D13 | Sequence | 508 | 001838 (28) | emb|CDP19007.1| | 8e-79 | unnamed protein product [Coffea canephora] | |||||
| JMFN034B24 | Sequence | 566 | 001838 (28) | emb|CDP19007.1| | 1e-113 | unnamed protein product [Coffea canephora] | |||||
| JMFN042A10 | Sequence | 634 | 001838 (28) | ref|XP_009626274.1| | 6e-145 | PREDICTED: chlorophyll a-b binding protein 36, chloroplastic [Nicotiana tomento | |||||
| JMFN046F23 | Sequence | 581 | 001838 (28) | emb|CDP19007.1| | 3e-117 | unnamed protein product [Coffea canephora] | |||||
| JMFS109B10 | Sequence | 627 | 001838 (28) | ref|NP_001050586.1| | 3e-134 | Os03g0592500 [Oryza sativa Japonica Group] sp|Q10HD0.1|CB23_ORYSJ RecName: Full= | |||||
| JMFS110A09 | Sequence | 627 | 001838 (28) | emb|CDP19007.1| | 3e-128 | unnamed protein product [Coffea canephora] | |||||
This contig is upended
. : . : . : . : . : . :
rJMFF015P20- CTTTTTATTTCNCNATAATTTTGTATTTAATATT
____________________________________________________________
consensus CTTTTTATTTCNCNATAATTTTGTATTTAATATT
. : . : . : . : . : . :
rJMFF015P20- TATATTCAAGTGTTGATAATATTTGATATGGAATATATCCCAAATAATAATAATAAGGAG
____________________________________________________________
consensus TATATTCAAGTGTTGATAATATTTGATATGGAATATATCCCAAATAATAATAATAAGGAG
. : . : . : . : . : . :
rJMFF015P20- GAGGTTTGCATGGGCAAAAAGGGAAATGAAAAGGAGGAAACCATATTAACCCATAGAAGA
rJMFF046E04- CCATAGAAGA
rJMFF046K23- A
JMFN011A04+ CCATAGAAGA
rJMFF051D13- CCATAGAAGA
rJMFF042O15- CCATAGAAGA
____________________________________________________________
consensus GAGGTTTGCATGGGCAAAAAGGGAAATGAAAAGGAGGAAACCATATTAACCCATAGAAGA
. : . : . : . : . : . :
rJMFF015P20- TAGTGGGATTTTGCATTACTTTAACNGGAACAGAAAGGTAAATTC
rJMFF046E04- TAGTGGGATTTTGCATTACTTTAACAGGAACAGAAAGGTAAATTCACATGCAGAAGAGGT
rJMFF046K23- TAGTGGGATTTTGCATTACTTTAACAGGAACAGAAAGGTAAATTCACATGCAGAAGAGGT
JMFN011A04+ TAGTGGGATTTTGCATTACTTTAACAGGAACAGAAAGGTAAATTCACATGCAGAAGAGGT
rJMFF051D13- TAGTGGGATTTTGCATTACTTTAACAGGAACAGAAAGGTAAATTCACATGCAGAAGAGGT
rJMFF042O15- TAGTGGGATTTTGCATTACTTTAACAGGAACAGAAAGGTAAATTCACATGCAGAAGAGGT
JMFS109B10+ AGGT
rJMFF003K23- GTGGGATTTTGCATTACTTTAACAGGAACAGAAAGGTAAATTCACATGCAGAAGAGGT
rJMFF035D15- AGTGGGATTTTGCATTACTTTAACAGGAACAGAAAGGTAAATTCACATGCAGAAGAGGT
rJMFF036A14- TGGGATTTTGCATTACTTTAACAGGAACAGAAAGGTAAATTCACATGCAGAAGAGGT
____________________________________________________________
consensus TAGTGGGATTTTGCATTACTTTAACAGGAACAGAAAGGTAAATTCACATGCAGAAGAGGT
. : . : . : . : . : . :
rJMFF046E04- AATTAAGTAATGACATCACTCATGATCATCAGTGATTTCACTTTCCGGGTACAAAGTTTG
rJMFF046K23- AATTAAGTAATGACATCACTCATGATCATCAGTGATTTCACTTTCCGGGTACAAAGTTTG
JMFN011A04+ AATTAAGTAATGACATCACTCATGATCATCAGTGATTTCACTTTCCGGGTACAAAGTTTG
rJMFF051D13- AATTAAGTAATGACATCACTCATGATCATCAGTGATTTCACTTTCCGGGTACAAAGTTTG
rJMFF042O15- AATTAAGTAATGACATCACTCATGATCATCAGTGATTTCACTTTCCGGGTACAAAGTTTG
JMFS109B10+ AATTAAGTAATGACATCACTCATGATCATCAGTGATTTCACTTTCCGGGTACAAAGTTTG
rJMFF003K23- AATTAAGTAATGACATCACTCATGATCATCAGTGATTTCACTTTCCGGGTACAAAGTTTG
rJMFF035D15- AATTAAGTAATGACATCACTCATGATCATCAGTGATTTCACTTTCCGGGTACAAAGTTTG
JMFN042A10+ ATTTCACTTTCCGGGTACAAAGTTGN
rJMFF036A14- AATTAAGTAATGACATCACTCATGATCATCAGTGATTTCACTTTCCGGGTACAAAGTTTG
____________________________________________________________
consensus AATTAAGTAATGACATCACTCATGATCATCAGTGATTTCACTTTCCGGGTACAAAGTTTG
. : . : . : . : . : . :
rJMFF046E04- TAGCATAAGCCCAAGCATTGTTAGCTACCGGGTCAGCAACGTGGTCGAAGAGGTTCTCAA
rJMFF046K23- TAGCATAAGCCCAAGCATTGTTAGCTACCGGGTCAGCAACGTGGTCGAAGAGGTTCTCAA
JMFN011A04+ TAGCATAAGCCCAAGCATTGTTAGCTACCGGGTCAGCAACGTGGTCGAAGAGGTTCTCAA
rJMFF051D13- TAGCATAAGCCCAAGCATTGTTAGCTACCGGGTCAGCAACGTGGTCGAAGAGGTTCTCAA
rJMFF042O15- TAGCATAAGCCCAAGCATTGTTAGCTACCGGGTCAGCAACGTGGTCGAAGAGGTTCTCAA
JMFS109B10+ TAGCATAAGCCCAAGCATTGTTAGCTACCGGGTCAGCAACGTGGTCGAAGAGGTTCTCAA
rJMFF003K23- TAGCATAAGCCCAAGCATTGTTAGCTACCGGGTCAGCAACGTGGTCGAAGAGGTTCTCAA
rJMFF035D15- TAGCATAAGCCCAAGCATTGTTAGCTACCGGGTCAGCAACGTGGTCGAAGAGGTTCTCAA
JMFN042A10+ TAGCATAAGCCCAAGCATTGTTAGCTACCGGGTCAGCAACGTGGTCGAAGAGGTTCTCAA
rJMFF036A14- TAGCATAAGCCCAAGCATTGTTAGCTACCGGGTCAGCAACGTGGTCGAAGAGGTTCTCAA
____________________________________________________________
consensus TAGCATAAGCCCAAGCATTGTTAGCTACCGGGTCAGCAACGTGGTCGAAGAGGTTCTCAA
. : . : . : . : . : . :
rJMFF046E04- TCGGGCCCTTTCCGGTAACAATGGCCTGCACGAGAAACCCGAACATGGAGAACATAGCCA
rJMFF046K23- TCGGGCCCTTTCCGGTAACAATGGCCTGCACGAAGAACCCGAACATGGAGAACATAGCCA
JMFN011A04+ TCGGGCCCTTTCCGGTAACAATGGCCTGCACGAAGAACCCGAACATGGAGAACATAGCCA
rJMFF051D13- TCGGGCCCTTTCCGGTAACAATGGCCTGCACGAAGAACCCGAACATGGAGAACATAGCCA
rJMFF042O15- TCGGGCCCTTTCCGGTAACAATGGCCTGCACGAAGAACCCGAACATGGAGAACATAGCCA
rJMFF036G18- CA
JMFS109B10+ TCGGGCCCTTTCCGGTAACAATGGCCTGCACGAAGAACCCGAACATGGAGAACATAGCCA
rJMFF003K23- TCGGGCCCTTTCCGGTAACAATGGCCTGCACGAAGAACCCGAACATGGAGAACATAGCCA
rJMFF035D15- TCGGGCCCTTTCCGGTAACAATGGCCTGCACGAAGAACCCGAACATGGAGAACATAGCCA
JMFN042A10+ TCGGGCCCTTTCCGGTAACAATGGCCTGCACGAAGAACCCGAACATGGAGAACATAGCCA
rJMFF036A14- TCGGGCCCTTTCCGGTAACAATGGCCTGCACGAAGAACCCGAACATGGAGAACATAGCCA
____________________________________________________________
consensus TCGGGCCCTTTCCGGTAACAATGGCCTGCACGAAGAACCCGAACATGGAGAACATAGCCA
. : . : . : . : . : . :
rJMFF046E04- AACGCCCGTTCTTCAGTTCCTTCACTTTCAGCTCCGCGAACGCCTCCGGGTCATCGGCCA
rJMFF046K23- AACGCCCGTTCTTCAGTTCCTTCACTTTCAGCTCCGCGAACGCCTCCGGGTCATCGGCCA
JMFN011A04+ AACGCCCGTTCTTCAGTTCCTTCACTTTCAGCTCCGCGAACGCCTCCGGGTCATCGGCCA
rJMFF051D13- AACGCCCGTTCTTCAGTTCCTTCACTTTCAGCTCCGCGAACGCCTCCGGGTCATCGGCCA
rJMFF042O15- AACGCCCGTTCTTCAGTTCCTTCACTTTCAGCTCCGCGAACGCCTCCGGGTCATCGGCCA
rJMFF036G18- AACGCCCGTTCTTCAGTTCCTTCACTTTCNGCTCCNCGAACGCCTCCGGGTCATCGGNCA
JMFS109B10+ AACGCCCGTTCTTCAGTTCCTTCACTTTCAGCTCCGCGAACGCCTCCGGGTCATCGGCCA
rJMFF003K23- AACGCCCGTTCTTCAGTTCCTTCACTTTCAGCTCCGCGAACGCCTCCGGGTCATCGGCCA
rJMFF035D15- AACGCCCGTTCTTCAGTTCCTTCACTTTCAGCTCCGCGAACGCCTCCGGGTCGAAGGCCA
JMFN042A10+ AACGCCCGTTCTTCAGTTCCTTCACTTTCAGCTCCGCGAACGCCTCCGGGTCATCGGCCA
rJMFF036A14- AACGCCCGTTCTTCAGTTCCTTCACTTTCAGCTCCGCGAACGCCTCCGGGTCATCGGCCA
____________________________________________________________
consensus AACGCCCGTTCTTCAGTTCCTTCACTTTCAGCTCCGCGAACGCCTCCGGGTCATCGGCCA
. : . : . : . : . : . :
rJMFF046E04- ACCCCAGTGGGTCGAAGGCGCCGCCGGGGTACACCTTGTCCAGCCCCTCTCCGAGCGGGC
rJMFF046K23- ACCCCAGTGGGTCGAAGGCGCCGCCGGGGTACACCTTGTCCAGCCCCTCTCCGAGCGGGC
JMFN011A04+ ACCCCAGTGGGTCGAAGGCGCCGCCGGGGTACACCTTGTCCAGCCCCTCTCCGAGCGGGC
rJMFF051D13- ACCCCAGTGGGTCGAAGGCGCCGCCGGGGTACACCTTGTCCAGCCCCTCTCCGAGCGGGC
rJMFF042O15- ACCCCAGTGGGTCGAAGGCGCCGCCGGGGTACACCTTGTCCAGCCCCTCTCCGAGCGGGC
rJMFF036G18- ACCCCNGNGGGNCGAAGGCGCCGCCGGGGTACACCTTGTCCAGCCCCTCTNCGAGCGGGC
JMFS109B10+ ACCCCAGTGGGTCGAAGGCGCCGCCGGGGTACACCTTGTCCAGCCCCTCTCCGAGCGGGC
rJMFF003K23- ACCCCAGTGGGTCGAAGGCGCCGCCGGGGTACACCTTGTCCAGCCCCTCTCCGAGCGGGC
rJMFF035D15- ACCCCAGTGGGTCGAAGGCGCCGCCGGGGTACACCTTGTCCAGCCCCTCTCCGAGCGGGC
JMFN042A10+ ACCCCAGTGGGTCGAAGGCGCCGCCGGGGTACACCTTGTCCAGCCCCTCTCCGAGCGGGC
rJMFF036A14- ACCCCAGTGGGTCGAAGGCGCCGCCGGGGTACACCTTGTCCAGCCCCTCTCCGAGCGGGC
JMFS110A09+ CGAAGGCGCCGCCGGGGTACACCTTGTCCAGCCCCTCTCCGAGCGGGC
JMFN046F23+ GGGC
JMFN006M01+ CGAAGGCGCCGCCGGGGTACACCTTGTCCAGCCCCTCTCCGAGCGGGC
JMFF042O15+ TCGAAGGCGCCGCCGGGGTACACCTTGTCCAGCCCCTCTCCGAGCGGGC
____________________________________________________________
consensus ACCCCAGTGGGTCGAAGGCGCCGCCGGGGTACACCTTGTCCAGCCCCTCTCCGAGCGGGC
. : . : . : . : . : . :
rJMFF046E04- CGCCGCCGACTCTGTATCCCTCCACGAACCCCATCAGCACCACCTGGGAAGCCCAGATGG
rJMFF046K23- CGCCGCCGACTCTGTATCCCTCCACGAACCCCATCAGCACCACCTGGGAAGCCCAGATGG
JMFN011A04+ CGCCGCCGACTCTGTATCCCTCCACGAACCCCATCAGCACCACCTGGGAAGCCCAGATGG
rJMFF051D13- CGCCGCCGACTCTGTATCCCTCCACGAACCCCATCAGCACCACCTGGGAAGCCCAGATGG
rJMFF042O15- CGCCGCCGACTCTGTATCCCTCCACGAACCCCATCAGCACCACCTGGGAAGCCCAGATGG
rJMFF036G18- CGCCGNCGACTCTGTATCCCTCCACGAACCCCATCAGCACCANCTGGGAAGCCNAGATGG
JMFS109B10+ CGCCGCCGACTCTGTATCCCTCCACGAACCCCATCAGCACCACCTGGGAAGCCCAGATGG
rJMFF003K23- CGCCGCCGACTCTGTATCCCTCCACGAACCCCATCAGCACCACCTGGGAAGCCCAGATGG
rJMFF035D15- CGCCGCCGACTCTGTATCCCTCCACGAACCCCATCAGCACCACCTGGGAAGCCCAGATGG
JMFN042A10+ CGCCGCCGACTCTGTATCCCTCCACGAACCCAATCAGCACCACCTGGGAAGCCCAGATGG
rJMFF036A14- CGCCGCCGACTCTGTATCCCTCCACGAACCCCATCAGCACCACCTGGGAAGCCCAGATGG
JMFS110A09+ CGCCGCCGACTCTGTATCCCTCCACGAACCCCATCAGCACCACCTGGGAAGCCCAGATGG
JMFN046F23+ CGCCGCCGACTCTGTATCCCTCCACGAACCCCATCAGCACCACCTGGGAAGCCCAGATGG
JMFN006M01+ CGCCGCCGACTCTGTATCCCTCCACGAACCCCATCAGCACCACCTGGGAAGCCCAGATGG
JMFF046K23+ CGAACCCCATCAGCACCACCTGGGAAGCCCAGATGG
JMFN034B24+ GTATCCCTCCACGAACCCCATCAGCACCACCTGGGAAGCCCAGATGG
JMFN002A01+ CGAACCCCATCAGCACCACCTGGGAAGCCCAGATGG
JMFF042O15+ CGCCGCCGACTCTGTATCCCTCCACGAACCCCATCAGCACCACCTGGGAAGCCCAGATGG
JMFF036G18+ GGAAGCCCAGATGG
JMFF046E04+ GGAAGCCCAGATGG
JMFF035D15+ GGGAAGCCCAGATGG
JMFF051D13+ CTGGGAAGCCCAGATGG
____________________________________________________________
consensus CGCCGCCGACTCTGTATCCCTCCACGAACCCCATCAGCACCACCTGGGAAGCCCAGATGG
. : . : . : . : . : . :
rJMFF046E04- CCAGGATGCTCTGGGCGTGGATCAGGTTTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
rJMFF046K23- CCAGGATGCTCTGGGCGTGGATCAGGTTTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
JMFN011A04+ CCAGGATGCTCTGGGCGTGGATCAGGTTTGGGTTGCCCAA
rJMFF051D13- CCAGGATGCTCTGGGCGTGGATCAGGTTTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
rJMFF042O15- CCAGGATGCTCTGGGCGTGGATCAGGTTTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
rJMFF036G18- CNANGATGCTCTGGGNGNGGATNANGNTTGGGTTGCCCAAGTANNCCAATCCGCCCTCCN
JMFS109B10+ CCAGGATGCTCTGGGCGTGGATCAGGTTTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
rJMFF003K23- CCAGGATGCTCTGGGCGTGGATCAGGTTTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
rJMFF035D15- CCAGGATGCTCTGGGCGTGGATCAGGTTTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
JMFN042A10+ CCAGGATGCTCTGGGCGTGGATCAGGTTTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
rJMFF036A14- CCAGGATGCTCTGGGCGTGGATCAGGTTTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
JMFS110A09+ CCAGGATGCTCTGGGCGTGGATCAGGTTTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
JMFN046F23+ CCAGGATGCTCTGGGCGTGGATCAGGTTTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
JMFN006M01+ CCAGGATGCTCTGGGCGTGGATCAGGTTTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
JMFF046K23+ CCAGGATGCTCTGGGCGTGGATCAGGTTTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
JMFN034B24+ CCAGGATGCTCTGGGCGTGGATCAGGTTTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
JMFN002A01+ CCAGGATGCTCTGGGCGTGGATCAGGTTTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
JMFF042O15+ CCAGGATGCTCTGGGCGTGGATCAGGTTTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
JMFF036G18+ CCAGGATGCTCTGGGCGTGGATCAGGTTTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
JMFF046E04+ CCAGGATGCTCTGGGCGTGGATCAGGTTTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
JMFF035D15+ CCAGGATGCTCTGGGCGTGGATCAGGTTTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
JMFF051D13+ CCAGGATGCTCTGGGCGTGGATCAGGTTTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
JMFF015P20+ GGATCAGGTTTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
JMFN011G23+ TTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
JMFF036A14+ GGATCAGGTTTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
____________________________________________________________
consensus CCAGGATGCTCTGGGCGTGGATCAGGTTTGGGTTGCCCAAGTAGTCCAATCCGCCCTCCG
. : . : . : . : . : . :
rJMFF046E04- AGAAGATCTGGGCTCCC
rJMFF046K23- AGAAGATCTGGGCT
rJMFF051D13- AGAAGATCTGGGCTCCCGCCTTGAACCACACCGCC-T
rJMFF042O15- AGAAGATCTGGGCTCCCGCCTTGAACCACACCGCC-TCGCCGAACTTCACGCCGTTCTTC
rJMFF036G18- AGAANATCTGGGCTCCCGCCTTGAACCACACCGCC-TCGACGAACTTCACGCCGTTCTTC
JMFS109B10+ AGAAGATCTGGGCTCCCGCCTTGAACCACACCGCC-TCGCCGAACTTCACGCCGTTCTTC
rJMFF003K23- AGAAGATCTGGGCTCCCGCCTTGAACCACACCGCC-TCGCCGAACTTCACGCCGTTCTTC
rJMFF035D15- AGAAGATCTGGGCTCCCGCCTTGAACCACACCGCC-TCGCCGAACTTCACGCCGTTCTTC
JMFN042A10+ AGAAGATCTGGGCTCCCGCCTTGAACCACACCGCC-TCGCCGAACTTCACGCCGTTCTTC
rJMFF036A14- AGAAGATCTGGGCTCCCGCCTTGAACCACACCGCC-TCGCCGAACTTCACGCCGTTCTTC
JMFS110A09+ AGAAGATCTGGGCTCCCGCCTTGAACCACACCGCC-TCGCCGAACTTCACGCCGTTCTTC
JMFN046F23+ AGAAGATCTGGGCTCCCGCCTTGAACCACACCGCC-TCGCCGAACTTCACGCCGTTCTTC
JMFN006M01+ AGAAGATCTGGGCTCCCGCCTTGAACCACACCGCC-TCGCCGAACTTCACGCCGTTCTTC
JMFF046K23+ AGAAGATCTGGGCTCCCGCCTTGAACCACACCGCC-TCGCCGAACTTCACGCCGTTCTTC
JMFN034B24+ AGAAGATCTGGGCTCCCGCCTTGAACCACACCGCC-TCGCCGAACTTCACGCCGTTCTTC
JMFN002A01+ AGAAGATCTGGGCTCCCGCCTTGAACCACACCGCC-TCGCCGAACTTCACGCCGTTCTTC
JMFF042O15+ AGAAGATCTGGGCTCCCGCCTTGAACCACACCGCC-TCGCCGAACTTCACGCCGTTCTTC
JMFF036G18+ AGAAGATCTGGGCTCCCGCCTTGAACCACACCGCC-TCGCCGAACTTCACGCCGTTCTTC
JMFF046E04+ AGAAGATCTGGGCTCCCGCCTTGAACCACACCGCC-TCGCCGAACTTCACGCCGTTCTTC
JMFF035D15+ AGAAGATCTGGGCTCCCGCCTTGAACCACACCGCC-TCGCCGAACTTCACGCCGTTCTTC
JMFF051D13+ AGAAGATCTGGGCTCCCGCCTTGAACCACACCGCC-TCGCCGAACTTCACGCCGTTCTTC
JMFF015P20+ AGAAGATCTGGGCTCCCGCCTTGAACCACACCGCCTTCGCCGAACTTCACGCCGTTCTTC
JMFN011G23+ AGAAGATCTGGGCTCCCGCCTTGAACCACACCGCC-TCGCCGAACTTCACGCCGTTCTTC
JMFF036A14+ AGAAGATCTGGGCTCCCGCCTTGAACCACACCGCC-TCGCCGAACTTCACGCCGTTCTTC
JMFN030D13+ CGCC-TCGCCGAACTTCACGCCGTTCTTC
____________________________________________________________
consensus AGAAGATCTGGGCTCCCGCCTTGAACCACACCGCC-TCGCCGAACTTCACGCCGTTCTTC
. : . : . : . : . : . :
rJMFF042O15- GACAGGATTTCCGGGAACACGCAGCCCAGAGCGCCCAGCATGGC
rJMFF036G18- NANAGGATTTCCNGGAACACGCAG
JMFS109B10+ GACAGGATTTCCGGGAACACGCAGCCCAGAGCGCCCAGCATGGCCCACCGGGAGTGGATC
rJMFF003K23- GACAGGATTTCCGGGAACACGCAGCCCAGAGCGCCCAGCATGGCCCACCGGGAGTGGATC
rJMFF035D15- GACAGGATTTCCGGGAACACGCAGCCCAGAGCGCCCAGCATGGCCCACCGGGAGTGGATC
JMFN042A10+ GACAGGATTTCCGGGAACACGCAGCCCAGAGCGCCCAGCATGGCCCACCGGGAGTGGATC
rJMFF036A14- GACAGGATTTCCGGGAACACGCAGCCCAGAGCGCCCAGCATGGCCCACCGGGAGTGGATC
JMFS110A09+ GACAGGATTTCCGGGAACACGCAGCCCAGAGCGCCCAGCATGGCCCACCGGGAGTGGATC
JMFN046F23+ GACAGGATTTCCGGGAACACGCAGCCCAGAGCGCCCAGCATGGCCCACCGGGAGTGGATC
JMFN006M01+ GACAGGATTTCCGGGAACACGCAGCCCAGAGCGCCCAGCATGGCCCACCGGGAGTGGATC
JMFF046K23+ GACAGGATTTCCGGGAACACGCAGCCCAGAGCGCCCAGCATGGCCCACCGGGAGTGGATC
JMFN034B24+ GACAGGATTTCCGGGAACACGCAGCCCAGAGCGCCCAGCATGGCCCACCGGGAGTGGATC
JMFN002A01+ GACAGGATTTCCGGGAACACGCAGCCCAGAGCGCCCAGCATGGCCCACCGGGAGTGGATC
JMFF042O15+ GACAGGATTTCCGGGAACACGCAGCCCAGAGCGCCCAGCATGGCCCACCGGGAGTGGATC
JMFF036G18+ GACAGGATTTCCGGGAACACGCAGCCCAGAGCGCCCAGCATGGCCCACCGGGAGTGGATC
JMFF046E04+ GACAGGATTTCCGGGAACACGCAGCCCAGAGCGCCCAGCATGGCCCACCGGGAGTGGATC
JMFF035D15+ GACAGGATTTCCGGGAACACGCAGCCCAGAGCGCCCAGCATGGCCCACCGGGAGTGGATC
JMFF051D13+ GACAGGATTTCCGGGAACACGCAGCCCAGAGCGCCCAGCATGGCCCACCGGGAGTGGATC
JMFF015P20+ GACAGGATTTCCGGGAACACGCAGCCCAGAGCGCCCAGCATGGCCCACCGGGAGTGGATC
JMFN011G23+ GACAGGATTTCCGGGAACACGCAGCCCAGAGCGCCCAGCATGGCCCACCGGGAGTGGATC
JMFF036A14+ GACAGGATTTCCGGGAACACGCAGCCCAGAGCGCCCAGCATGGCCCACCGGGAGTGGATC
JMFN030D13+ GACAGGATTTCCGGGAACACGCAGCCCAGAGCGCCCAGCATGGCCCACCGGGAGTGGATC
____________________________________________________________
consensus GACAGGATTTCCGGGAACACGCAGCCCAGAGCGCCCAGCATGGCCCACCGGGAGTGGATC
. : . : . : . : . : . :
JMFS109B10+ ACCTCCAGCTCGCGGTTCCTGGCGAAGGTCTCTGGGTCCGCTGAAAGCCCGGCAGTGTCC
rJMFF003K23- ACCTCCAGCTCGCGGTTCCTGGCGAAGGTCTCTGGGTCCGCTGAAAGCCCGGCAGTGTCC
rJMFF035D15- ACCTCCAGCTCGCGGTTCCTGGCGAANGTCTCTGGGTCCGCTGAAAG-CCGGCAGTGTCC
JMFN042A10+ ACCTCCAGCTCGCGGTTCCTGGCGAAGGTCTCTGGATCCGCTGAAAGCCCGGCAGTGTCC
rJMFF036A14- ACCTCCAGCTCGCGGTTCCTGGCGAAGGTCTCTGGGTCCGCTGAAAGCCCGGCAGTGTCC
JMFS110A09+ ACCTCCAGCTCGCGGTTCCTGGCGAAGGTCTCTGGGTCCGCTGAAAGCCCGGCAGTGTCC
JMFN046F23+ ACCTCCAGCTCGCGGTTCCTGGCGAAGGTCTCTGGGTCCGCTGAAAGCCCGGCAGTGTCC
JMFN006M01+ ACCTCCAGCTCGCGGTTCCTGGCGAAGGTCTCTGGGTCCGCTGAAAGCCCGGCAGTGTCC
JMFF046K23+ ACCTCCAGCTCGCGGTTCCTGGCGAAGGTCTCTGGGTCCGCTGAAAGCCCGGCAGTGTCC
JMFN034B24+ ACCTCCAGCTCGCGGTTCCTGGCGAAGGTCTCTGGGTCCGCTGAAAGCCCGGCAGTGTCC
JMFN002A01+ ACCTCCAGCTCGCGGTTCCTGGCGAAGGTCTCTGGGTCCGCTGAAAGCCCGGCAGTGTCC
JMFF042O15+ ACCTCCAGCTCGCGGTTCCTGGCGAAGGTCTCTGGGTCCGCTGAAAGCCCGGCAGTGTCC
JMFF036G18+ ACCTCCAGCTCGCGGTTCCTGGCGAAGGTCTCTGGGTCCGCTGAAAGCCCGGCAGTGTCC
JMFF046E04+ ACCTCCAGCTGGCGGTTCCTGGCGAAGGTCTCTGGGTCCGCTGAAAGCCCGGCAGTGTCC
JMFF035D15+ ACCTCCAGCTCGCGGTTCCTGGCGAAGGTCTCTGGGTCCGCTGAAAG-CCGGCAGTGTCC
JMFF051D13+ ACCTCCAGCTCGCGGTTCCTGGCGAAGGTCTCTGGGTCCGCTGAAAGCCCGGCAGTGTCC
JMFF015P20+ ACCTCCAGCTCGCGGTTCCTGGCGAAGGTCTCTGGGTCCGCTGAAAGCCCGGCAGTGTCC
JMFN011G23+ ACCTCCAGCTCGCGGTTCCTGGCGAAGGTCTCTGGGTCCGCTGAAAGCCCGGCAGTGTCC
JMFF036A14+ ACCTCCAGCTCGCGGTTCCTGGCGAAGGTCTCTGGGTCCGCTGAAAGCCCGGCAGTGTCC
JMFN030D13+ ACCTCCAGCTCGCGGTTCCTGGCGAAGGTCTCTGGGTCCGCTGAAAGCCCGGCAGTGTCC
____________________________________________________________
consensus ACCTCCAGCTCGCGGTTCCTGGCGAAGGTCTCTGGGTCCGCTGAAAGCCCGGCAGTGTCC
. : . : . : . : . : . :
JMFS109B10+ CACCCGTAGTCGCCGGGGAACTCG
rJMFF003K23- CACCCGTAGTCGCCGGGGAACTCGCCGGTAA
rJMFF035D15- CACCCGTAGTCGCCGGGGAACTCGCCGGTAAGGTATGACGGAGTTTGCTCC
JMFN042A10+ CACCCGTAGTCGCCGGGGAACTCGCCGGTAAGGTATGACGGAGTTTGCTCCGAGAATGGG
rJMFF036A14- CACCCGTAGTCGCCGGGGAACTCGCCGGTAAGGTATGACGGAGTTTGCTCCGAGAATGGG
JMFS110A09+ CACCCGTAGTCGCCGGGGAACTCGCCGGTAAGGTATGACGGAGTTTGCTCCGAGAATGGG
JMFN046F23+ CACCCGTAGTCGCCGGGGAACTCGCCGGTAAGGTATGACGGAGTTTGCTCCGAGAATGGG
JMFN006M01+ CACCCGTAGTCGCCGGGGAACTCGCCGGTAAGGTATGACGGAGTTTGCTCCGAGAATGGG
JMFF046K23+ CACCCGTAGTCGCCGGGGAACTCGCCGGTAAGGTATGACGGAGTTTGCTCCGAGAATGGG
JMFN034B24+ CACCCGTAGTCGCCGGGGAACTCGCCGGTAAGGTATGACGGAGTTTGCTCCGAGAATGGG
JMFN002A01+ CACCCGTAGTCGCCGGGGAACTCGCCGGTAAGGTATGACGGAGTTTGCTCCGAGAATGGG
JMFF042O15+ CACCCGTAGTCGCCGGGGAACTCGCCGGTAAGGTATGACGGAGTTTGCTCCGAGAATGGG
JMFF036G18+ CACCCGTAGTCGCCGGGGAACTCGCCGGTAAGGTATGACGGAGTTTGCTCCGAGAATGGG
JMFF046E04+ CACCCGTAGTCGCCGGGGAACTCGCCGGTAAGGTATGACGGAGTTTGCTCCGAGAATGGG
JMFF035D15+ CACCCGTAGTCGCCGGGGAACTCGCCGGTAAGGTATGACGGAGTTTGCTCCGAGAATGGG
JMFF051D13+ CACCCGTAGTCGCCGGGGAACTCGCCGGTAAGGTATGACGGAGTTTGCTCCGAGAATGGG
JMFF015P20+ CACCCGTAGTCGCCGGGGAACTCGCCGGTAAGGTATGACGGAGTTTGCTCCGAGAATGGG
JMFN011G23+ CACCCGTAGTCGCCGGGGAACTCGCCGGTAAGGTATGACGGAGTTTGCTCCGAGAATGGG
JMFF036A14+ CACCCGTAGTCGCCGGGGAACTCGCCGGTAAGGTATGACGGAGTTTGCTCCGAGAATGGG
JMFN030D13+ CACCCGTAGTCGCCGGGGAACTCGCCGGTAAGGTATGACGGAGTTTGCTCCGAGAATGGG
____________________________________________________________
consensus CACCCGTAGTCGCCGGGGAACTCGCCGGTAAGGTATGACGGAGTTTGCTCCGAGAATGGG
. : . : . : . : . : . :
JMFN042A10+ CCCAAGTAC
rJMFF036A14- CCCAAGTACTTGGGGCGGTCCGGGCCATACCANATGCTCTGGGG
JMFS110A09+ CCCAAGTACTTGGGGCGGTCCGGGCCATACCAGATGCTCTGGGGAGCACTTTTGACGGTA
JMFN046F23+ CCCAAGTACTTGGGGCGGTCCGGGCCATACCAGATGCTCTGGGGAGCACTTTTGACGGTA
JMFN006M01+ CCCAAGTACTTGGGGCGGTCCGGGCCATACCAGATGCTCTGGGGAGCACTTTTGACGGTA
JMFF046K23+ CCCAAGTACTTGGGGCGGTCCGGGCCATACCAGATGCTCTGGGGAGCACTTTTGACGGTA
JMFN034B24+ CCCAAGTACTTGGGGCGGTCCGGGCCATACCAGATGCTCTGGGGAGCACTTTTGACGGTA
JMFN002A01+ CCCAAGTACTTGGGGCGGTCCGGGCCATACCAGATGCTCTGGGGAGCACTTTTGACGGTA
JMFF042O15+ CCCAAGTACTTGGGGCGGTCCGGGCCATACCAGATGCTCTGGGGAGCACTTTTGACGGTA
JMFF036G18+ CCCAAGTACTTGGGGCGGTCCGGGCCATACCAGATGCTCTGGGGAGCACTTTTGACGGTA
JMFF046E04+ CCCAAGTACTTGGGGCGGTCCGGGCCATACCAGATGCTCTGGGGAGCACTTTTGACGGTA
JMFF035D15+ CCCAAGTACTTGGGGCGGTCCGGGCCATACCAGATGCTCTGGGGAGCACTTTTGACGGTA
JMFF051D13+ CCCAAGTACTTGGGGCGGTCCGGGCCATACCAGATGCTCTGGGGAGCACTTTTGACGGTA
JMFF015P20+ CCCAAGTACTTGGGGCGGTCCGGGCCATACCAGATGCTCTGGGGAGCACTTTTGACGGTA
JMFN011G23+ CCCAAGTACTTGGGGCGGTCCGGGCCATACCAGATGCTCTGGGGAGCACTTTTGACGGTA
JMFF003K23+ GTA
JMFF036A14+ CCCAAGTACTTGGGGCGGTCCGGGCCATACCAGATGCTCTGGGGAGCACTTTTGACGGTA
JMFN030D13+ CCCAAGTACTTGGGGCGGTCCGGGCCATACCAGATGCTCTGGGGAGCACTTTTGACGGTA
____________________________________________________________
consensus CCCAAGTACTTGGGGCGGTCCGGGCCATACCAGATGCTCTGGGGAGCACTTTTGACGGTA
. : . : . : . : . : . :
JMFS110A09+ CGCCTCATGGTGAAGCGAGCACTGCCGGAGCTGCCGACCTTGCGGAGGAGATCGGTCTGG
JMFN046F23+ CGCCTCATGGTGAAGCGAGCACTGCCGGAGCTGCCGACCTTGCGGAGGAGATCGGTCTGG
JMFN006M01+ CGCCTCATGGTGAAGCGAGCACTGCCGGAGCTGCCGACCTTGCGGAGGAGATCGGTCTGG
JMFF046K23+ CGCCTCATGGTGAAGCGAGCACTGCCGGAGCTGCCGACCTTGCGGAGGAGATCGGTCTGG
JMFN034B24+ CGCCTCATGGTGAAGCGAGCACTGCCGGAGCTGCCGACCTTGCGGAGGAGATCGGTCTGG
JMFN002A01+ CGCCTCATGGTGAAGCGAGCACTGCCGGAGCTGCCGACCTTGCGGAGGAGATCGGTCTGG
JMFF042O15+ CGCCTCATGGTGAAGCGAGCACTGCCGGAGCTGCCGACCTTGCGGAGGAGATCGGTCTGG
JMFF036G18+ CGCCTCATGGTGAAGCGAGCACTGCCGGAGCTGCCGACCTTGCGGAGGAGATCGGTCTGG
JMFF046E04+ CGCCTCATGGTGAAGCGAGCACTGCCGGAGCTGCCGACCTTGCGGAGGAGATCGGTCTGG
JMFF035D15+ CGCCTCATGGTGAAGCGAGCACTGCCGGAGCTGCCGACCTTGCGGAGGAGATCGGTCTGG
JMFF051D13+ CGCCTCATGGTGAAGCGAGCACTGCCGGAGCTGCCGACCTTGCGGAGGAGATCGGTCTGG
JMFF015P20+ CGCCTCATGGTGAAGCGAGCACTGCCGGAGCTGCCGACCTTGCGGAGGAGATCGGTCTGG
JMFN011G23+ CGCCTCATGGTGAAGCGAGCACTGCCGGAGCTGCCGACCTTGCGGAGGAGATCGGTCTGG
JMFF003K23+ CGCCTCATGGTGAAGCGAGCACTGCCGGAGCTGCCGACCTTGCGGAGGAGATCGGTCTGG
JMFF036A14+ CGCCTCATGGTGAAGCGAGCACTGCCGGAGCTGCCGACCTTGCGGAGGAGATCGGTCTGG
JMFN030D13+ CGCCTCATGGTGAAGCGAGCACTGCCGGAGCTGCCGACCTTGCGGAGGAGATCGGTCTGG
____________________________________________________________
consensus CGCCTCATGGTGAAGCGAGCACTGCCGGAGCTGCCGACCTTGCGGAGGAGATCGGTCTGG
. : . : . : . : . : . :
JMFS110A09+ GACTTCAAGGCACTCTGCCCAGCAAATGCTGATTGTTGGATACCGCAACTCGCCATTGAT
JMFN046F23+ GACTTCAAGGCACTCTGCCCAGCAAATGCTGATTGTTGGATACCGCAACTCGCCATTGAT
JMFN006M01+ GACTTCAAGGCACTCTGCCCAGCAAATGCTGATTGTTGGATACCGCAACTCGCCATTGAT
JMFF046K23+ GACTTCAAGGCACTCTGCCCAGCAAATGCTGATTGTTGGATACCGCAACTCGCCATTGAT
JMFN034B24+ GACTTCAAGGCACTCTGCCCAGCAAATGCTGATTGTTGGATACCGCAACTCGCCATTGAT
JMFN002A01+ GACTTCAAGGCACTCTGCCCAGCAAATGCTGATTGTTGGATACCGCAACTCGCCATTGAT
JMFF042O15+ GACTTCAAGGCACTCTGCCCAGCAAATGCTGATTGTTGGATACCGCAACTCGCCATTGAT
JMFF036G18+ GACTTCAAGGCACTCTGCCCAGCAAATGCTGATTGTTGGATACCGCAACTCGCCATTGAT
JMFF046E04+ GACTTCAAGGCACTCTGCCCAGCAAATGCTGATTGTTGGATACCGCAACTCGCCATTGAT
JMFF035D15+ GACTTCAAGGCACTCTGCCCAGCAAATGCTGATTGTTGGATACCGCAACTCGCCATTGAT
JMFF051D13+ GACTTCAAGGCACTCTGCCCAGCAAATGCTGATTGTTGGATACCGCAACTCGCCATTGAT
JMFF015P20+ GACTTCAAGGCACTCTGCCCAGCAAATGCTGATTGTTGGATACCGCAACTCGCCATTGAT
JMFN011G23+ GACTTCAAGGCACTCTGCCCAGCAAATGCTGATTGTTGGATACCGCAACTCGCCATTGAT
JMFF003K23+ GACTTCAAGGCACTCTGCCCAGCAAATGCTGATTGTTGGATACCGCAACTCGCCATTGAT
JMFF036A14+ GACTTCAAGGCACTCTGCCCAGCAAATGCTGATTGTTGGATACCGCAACTCGCCATTGAT
JMFN030D13+ GACTTCAAGGCACTCTGCCCAGCAAATGCTGATTGTTGGATACCGCAACTCGCCATTGAT
____________________________________________________________
consensus GACTTCAAGGCACTCTGCCCAGCAAATGCTGATTGTTGGATACCGCAACTCGCCATTGAT
. : . : . : . : . : . :
JMFS110A09+ GATGATTCTTCTGCTCTTCTTAGCTTTCTGTTGGAGTTGA
JMFN046F23+ GATGATTCTTCTGCTCTTCTTAGCTTTCTGTTGGAGTT
JMFN006M01+ GATGATTCTTCTGCTCTTCTTAGCTTTCTGTTGGAGTTGA
JMFF046K23+ GATGATTCTTCTGCTCTTCTTAGCTTTCTGTTGGAGTTGATGGTATGCAGTTGCGAATGG
JMFN034B24+ GATGATTCTTCTGCTCTTCTTAGCTTTCTGTTGGAGTTGA
JMFN002A01+ GATGATTCTTCTGCTCTTCTTAGCTTTCTGTTGGAGTTGATGGTATGCA
JMFF042O15+ GATGATTCTTCTGCTCTTCTTAGCTTTCTGTTGGAGTTGATGGTATGCAGTTGCGAAAGG
JMFF036G18+ GATGATTCTTCTGCTCTTCTTAGCTTTCTGTTGGAGTTGATGGTATGCAGTTGCGAATGG
JMFF046E04+ GATGATTCTTCTGCTCTTCTTAGCTTTCTGTTGGAGTTGATGGTATGCAGTTGCGAATGG
JMFF035D15+ GATGATTCTTCTGCTCTTCTTAGCTTTCTGTTGGAGTTGATGGTATGCAGTTGCGAATGG
JMFF051D13+ GATGATTCTTCTGCTCTTCTTAGCTTTCTGTTGGAGTTGATGGTATGCAGTTGCGAATGG
JMFF015P20+ GATGATTCTTCTGCTCTTCTTAGCTTTCTGTTGGAGTTGATGGTATGCAGTTGCGAATGG
JMFN011G23+ GATGATTCTTCTGCTCTTCTTAGCTTTCTGTTGGAGTTGATGGTATGCAGTTG
JMFF003K23+ GATGATTCTTCTGCTCTTCTTAGCTTTCTGTTGGAGTTGATGGTATGCAGTTGCGAATGG
JMFF036A14+ GATGATTCTTCTGCTCTTCTTAGCTTTCTGTTGGAGTTGATGGTATGCAGTTGCGAATGG
JMFN030D13+ GATGATTCTTCTGCTCTTCTTAGCTTTCTGTTGGAGTTGATGGTATGCAGTTGCGAATGG
____________________________________________________________
consensus GATGATTCTTCTGCTCTTCTTAGCTTTCTGTTGGAGTTGATGGTATGCAGTTGCGAATGG
. : . : . : . : . : . :
JMFF042O15+ AT
JMFF036G18+ ATGAAGT
JMFF046E04+ AT
JMFF035D15+ ATGAAGT
JMFF051D13+ ATGAAGT
JMFF015P20+ ATGAAGT
JMFF003K23+ ATGAAG
JMFF036A14+ ATGAAGT
JMFN030D13+ ATGAAGTGAATAGAAATCGGGGCGGGCGGAGTGTTATATATGGAAACTGGGATAGTTTGT
____________________________________________________________
consensus ATGAAGTGAATAGAAATCGGGGCGGGCGGAGTGTTATATATGGAAACTGGGATAGTTTGT