clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF026G07 | Sequence | 391 | 004563 (12) | ref|XP_009605477.1| | 1e-30 | PREDICTED: 40S ribosomal protein S11-like [Nicotiana tomentosiformis] ref|XP_009 | 362 | 004563 (12) | ref|XP_009605477.1| | 1e-30 | PREDICTED: 40S ribosomal protein S11-like [Nicotiana tomentosiformis] ref|XP_009 |
JMFN020A11 | Sequence | 607 | 004563 (12) | ref|XP_009605477.1| | 5e-96 | PREDICTED: 40S ribosomal protein S11-like [Nicotiana tomentosiformis] ref|XP_009 | |||||
JMSF009L24 | Sequence | 355 | 004563 (12) | gb|KDO61816.1| | 2e-48 | hypothetical protein CISIN_1g031480mg [Citrus sinensis] | 674 | 004563 (12) | ref|XP_009605477.1| | 7e-96 | PREDICTED: 40S ribosomal protein S11-like [Nicotiana tomentosiformis] ref|XP_009 |
JMSF024F12 | Sequence | 661 | 004563 (12) | ref|XP_009605477.1| | 5e-96 | PREDICTED: 40S ribosomal protein S11-like [Nicotiana tomentosiformis] ref|XP_009 | 677 | 004563 (12) | ref|XP_009605477.1| | 7e-96 | PREDICTED: 40S ribosomal protein S11-like [Nicotiana tomentosiformis] ref|XP_009 |
JMSF033G17 | Sequence | 665 | 004563 (12) | ref|XP_009605477.1| | 6e-96 | PREDICTED: 40S ribosomal protein S11-like [Nicotiana tomentosiformis] ref|XP_009 | 643 | 004563 (12) | ref|XP_009605477.1| | 5e-96 | PREDICTED: 40S ribosomal protein S11-like [Nicotiana tomentosiformis] ref|XP_009 |
JMSF051I04 | Sequence | 662 | 004563 (12) | ref|XP_009605477.1| | 6e-96 | PREDICTED: 40S ribosomal protein S11-like [Nicotiana tomentosiformis] ref|XP_009 | 673 | 004563 (12) | ref|XP_009605477.1| | 7e-96 | PREDICTED: 40S ribosomal protein S11-like [Nicotiana tomentosiformis] ref|XP_009 |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig004563============================================ 708 34 --------------------------------------------------------------------------------------------->JMSF051I04 <----------------------------------------------------------------------------------------------rJMSF051I04 35 -------------------------------------------------------------------------------------------->JMSF024F12 <----------------------------------------------------------------------------------------------rJMSF024F12 37 ------------------------------------------------->JMSF009L24 <----------------------------------------------------------------------------------------------rJMSF009L24 79 --------------------------------------------------------------------------------------------->JMSF033G17 <----------------------------------------------------------------------------------------rJMSF033G17 349 ------------------------------------------------------>JMFF026G07 <--------------------------------------------------rJMFF026G07
The following clones don't have the opposite end in this pair.
------------------------------------------------------------------------------------->JMFN020A11- <----------------------------------------------------------------------------------------------rJMSF052I04*