List of clones in pair P010961.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF025I14Sequence599000578 (23)ref|XP_007218753.1|2e-114hypothetical protein PRUPE_ppa009337mg [Prunus persica] gb|EMJ19952.1| hypotheti728000578 (23)ref|XP_009597091.1|2e-84PREDICTED: 40S ribosomal protein S4-like [Nicotiana tomentosiformis]
JMFF028P19Sequence565000578 (23)ref|XP_006488578.1|2e-105PREDICTED: 40S ribosomal protein S4-like [Citrus sinensis] gb|KDO67005.1| hypoth
JMFF032L13Sequence569000578 (23)ref|XP_007218753.1|3e-106hypothetical protein PRUPE_ppa009337mg [Prunus persica] gb|EMJ19952.1| hypotheti693000578 (23)ref|XP_011084586.1|3e-125PREDICTED: 40S ribosomal protein S4 [Sesamum indicum] ref|XP_011095064.1| PREDIC
JMFF035L23Sequence507000578 (23)emb|CDY69841.1|1e-89BnaAnng31720D [Brassica napus]661000578 (23)ref|XP_009597091.1|3e-96PREDICTED: 40S ribosomal protein S4-like [Nicotiana tomentosiformis]
JMFF047H17Sequence635000578 (23)ref|XP_011084586.1|7e-121PREDICTED: 40S ribosomal protein S4 [Sesamum indicum] ref|XP_011095064.1| PREDIC601000578 (23)gb|KJB38001.1|4e-49hypothetical protein B456_006G231800 [Gossypium raimondii]
JMFF051P23Sequence638000578 (23)ref|XP_007218753.1|2e-113hypothetical protein PRUPE_ppa009337mg [Prunus persica] gb|EMJ19952.1| hypotheti632000578 (23)ref|XP_009794044.1|6e-47PREDICTED: 40S ribosomal protein S4-like [Nicotiana sylvestris]
JMFN015D06Sequence624000578 (23)ref|XP_009600336.1|4e-72PREDICTED: 40S ribosomal protein S4 [Nicotiana tomentosiformis]
JMSF004G15Sequence379000578 (23)emb|CDY69841.1|1e-58BnaAnng31720D [Brassica napus]386000578 (23)gb|KJB38001.1|2e-19hypothetical protein B456_006G231800 [Gossypium raimondii]
JMSF005G15Sequence364000578 (23)emb|CDY69841.1|1e-54BnaAnng31720D [Brassica napus]
JMSF009C23Sequence370000578 (23)emb|CDY69841.1|2e-56BnaAnng31720D [Brassica napus]774000578 (23)ref|XP_011084586.1|2e-128PREDICTED: 40S ribosomal protein S4 [Sesamum indicum] ref|XP_011095064.1| PREDIC
JMSF024O24Sequence643000578 (23)ref|XP_007218753.1|6e-124hypothetical protein PRUPE_ppa009337mg [Prunus persica] gb|EMJ19952.1| hypotheti759000578 (23)ref|XP_011084586.1|2e-114PREDICTED: 40S ribosomal protein S4 [Sesamum indicum] ref|XP_011095064.1| PREDIC
JMSF037N13Sequence667000578 (23)ref|XP_010553233.1|6e-134PREDICTED: 40S ribosomal protein S4-3 isoform X2 [Tarenaya hassleriana]717000578 (23)ref|XP_011084586.1|1e-114PREDICTED: 40S ribosomal protein S4 [Sesamum indicum] ref|XP_011095064.1| PREDIC
JMSF042A10Sequence768000578 (23)ref|XP_011084586.1|7e-125PREDICTED: 40S ribosomal protein S4 [Sesamum indicum] ref|XP_011095064.1| PREDIC648000578 (23)ref|XP_009597091.1|2e-98PREDICTED: 40S ribosomal protein S4-like [Nicotiana tomentosiformis]

Contig 578 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig000578============================================1187         
   6  ----------------------------------------------------->JMFF051P23                                                
                                                    <----------------------------------------------------rJMFF051P23  
  68 ------------------------------->JMSF004G15                                                                       
                                                                   <--------------------------------rJMSF004G15  
 162 ------------------------------------------>JMFF035L23                                                            
                                    <-------------------------------------------------------rJMFF035L23  
 182  ---------------------------------------------------------------->JMSF042A10                                     
                                    <------------------------------------------------------rJMSF042A10  
 188 ------------------------------>JMSF009C23                                                                        
                         <---------------------------------------------------------------rJMSF009C23  
 190 ----------------------------------------------------->JMSF024O24                                                 
                         <---------------------------------------------------------------rJMSF024O24  
 200  ------------------------------------------------------->JMSF037N13                                              
                              <----------------------------------------------------------rJMSF037N13  
 239 ----------------------------------------------->JMFF032L13                                                       
                           <---------------------------------------------------------rJMFF032L13  
 288  ------------------------------------------------->JMFF025I14                                                    
                                        <----------------------------------------rJMFF025I14  
 288  ---------------------------------------------------->JMFF047H17                                                 
                                                    <----------------------------rJMFF047H17

The following clones don't have the opposite end in this pair.

                                            <------------------------------------------------JMFN015D06-              
      ----------------------------------------------->JMFF028P19-                                                     
     ------------------------------>JMSF005G15-