| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF025I14 | Sequence | 599 | 000578 (23) | ref|XP_007218753.1| | 2e-114 | hypothetical protein PRUPE_ppa009337mg [Prunus persica] gb|EMJ19952.1| hypotheti | 728 | 000578 (23) | ref|XP_009597091.1| | 2e-84 | PREDICTED: 40S ribosomal protein S4-like [Nicotiana tomentosiformis] |
| JMFF028P19 | Sequence | 565 | 000578 (23) | ref|XP_006488578.1| | 2e-105 | PREDICTED: 40S ribosomal protein S4-like [Citrus sinensis] gb|KDO67005.1| hypoth | |||||
| JMFF032L13 | Sequence | 569 | 000578 (23) | ref|XP_007218753.1| | 3e-106 | hypothetical protein PRUPE_ppa009337mg [Prunus persica] gb|EMJ19952.1| hypotheti | 693 | 000578 (23) | ref|XP_011084586.1| | 3e-125 | PREDICTED: 40S ribosomal protein S4 [Sesamum indicum] ref|XP_011095064.1| PREDIC |
| JMFF035L23 | Sequence | 507 | 000578 (23) | emb|CDY69841.1| | 1e-89 | BnaAnng31720D [Brassica napus] | 661 | 000578 (23) | ref|XP_009597091.1| | 3e-96 | PREDICTED: 40S ribosomal protein S4-like [Nicotiana tomentosiformis] |
| JMFF047H17 | Sequence | 635 | 000578 (23) | ref|XP_011084586.1| | 7e-121 | PREDICTED: 40S ribosomal protein S4 [Sesamum indicum] ref|XP_011095064.1| PREDIC | 601 | 000578 (23) | gb|KJB38001.1| | 4e-49 | hypothetical protein B456_006G231800 [Gossypium raimondii] |
| JMFF051P23 | Sequence | 638 | 000578 (23) | ref|XP_007218753.1| | 2e-113 | hypothetical protein PRUPE_ppa009337mg [Prunus persica] gb|EMJ19952.1| hypotheti | 632 | 000578 (23) | ref|XP_009794044.1| | 6e-47 | PREDICTED: 40S ribosomal protein S4-like [Nicotiana sylvestris] |
| JMFN015D06 | Sequence | 624 | 000578 (23) | ref|XP_009600336.1| | 4e-72 | PREDICTED: 40S ribosomal protein S4 [Nicotiana tomentosiformis] | |||||
| JMSF004G15 | Sequence | 379 | 000578 (23) | emb|CDY69841.1| | 1e-58 | BnaAnng31720D [Brassica napus] | 386 | 000578 (23) | gb|KJB38001.1| | 2e-19 | hypothetical protein B456_006G231800 [Gossypium raimondii] |
| JMSF005G15 | Sequence | 364 | 000578 (23) | emb|CDY69841.1| | 1e-54 | BnaAnng31720D [Brassica napus] | |||||
| JMSF009C23 | Sequence | 370 | 000578 (23) | emb|CDY69841.1| | 2e-56 | BnaAnng31720D [Brassica napus] | 774 | 000578 (23) | ref|XP_011084586.1| | 2e-128 | PREDICTED: 40S ribosomal protein S4 [Sesamum indicum] ref|XP_011095064.1| PREDIC |
| JMSF024O24 | Sequence | 643 | 000578 (23) | ref|XP_007218753.1| | 6e-124 | hypothetical protein PRUPE_ppa009337mg [Prunus persica] gb|EMJ19952.1| hypotheti | 759 | 000578 (23) | ref|XP_011084586.1| | 2e-114 | PREDICTED: 40S ribosomal protein S4 [Sesamum indicum] ref|XP_011095064.1| PREDIC |
| JMSF037N13 | Sequence | 667 | 000578 (23) | ref|XP_010553233.1| | 6e-134 | PREDICTED: 40S ribosomal protein S4-3 isoform X2 [Tarenaya hassleriana] | 717 | 000578 (23) | ref|XP_011084586.1| | 1e-114 | PREDICTED: 40S ribosomal protein S4 [Sesamum indicum] ref|XP_011095064.1| PREDIC |
| JMSF042A10 | Sequence | 768 | 000578 (23) | ref|XP_011084586.1| | 7e-125 | PREDICTED: 40S ribosomal protein S4 [Sesamum indicum] ref|XP_011095064.1| PREDIC | 648 | 000578 (23) | ref|XP_009597091.1| | 2e-98 | PREDICTED: 40S ribosomal protein S4-like [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMFF051P23- CCTTATGGCGGATCACCCTGGAGAGTTTTTTTTTTTTTTTTATAGAA
____________________________________________________________
consensus CCTTATGGCGGATCACCCTGGAGAGTTTTTTTTTTTTTTTTATAGAA
. : . : . : . : . : . :
rJMSF004G15- AGGGATATGCTGANTTAATATAAAACCTCTACCTTACAT
rJMFF051P23- TCTGATCTGATTTAATACTAAAGGGATATGCTGAATTAATATAAAACCTCTACCTTACAT
____________________________________________________________
consensus TCTGATCTGATTTAATACTAAAGGGATATGCTGAATTAATATAAAACCTCTACCTTACAT
. : . : . : . : . : . :
rJMSF004G15- CCAACAAAAAGAAATGCAACAACACAAATTTGTCAAATGCAAAAACAGCTCANATTGATA
rJMFF051P23- CCAACAAAAAGAAATGCAACAACACAAATTTGTCAAATGCAAAAACAGCTCACATTGATA
JMFN015D06- GTCAAATGCAAAAACAGCTCACATTGATA
rJMFF035L23- TTGATA
____________________________________________________________
consensus CCAACAAAAAGAAATGCAACAACACAAATTTGTCAAATGCAAAAACAGCTCACATTGATA
. : . : . : . : . : . :
rJMSF004G15- ACACTATAAGTGTCGCTAAAAGCAAGAAGTCGAATGAGTTTGGTGAAACAAAATCCCGTT
rJMFF051P23- ACACTATAAGTGTCGCTAAAAGCAAGAAGTCGAATGAGTTTGGTGAAACAAAATCCCGTT
JMFN015D06- ACACTATAAGTGTCGCTAAAAGCAAGAAGTCGAATGAGTTTGGTGAAACAAAATCCCGTT
rJMFF035L23- ACACTATAAGTGTCGCTAAAAGCAAGAAGTCGAATGAGTTTGGTGAAACAAAATCCCGTT
rJMSF042A10- GTGTCGCTAAAAGCAAGAAGTCGAATGAGTTTGGTGAAACAAAATCCCGTT
rJMSF037N13- AAGCAAGAAGTCGAATGAGTTTGGTGAAACAAAATCCCGTT
rJMSF009C23- AGCAAGAAGTCGAATGAGTTTGGTGAAACAAAATCCCGTT
rJMSF024O24- GCAAGAAGTCGAATGAGTTTGGTGAAACAAAATCCCGTT
____________________________________________________________
consensus ACACTATAAGTGTCGCTAAAAGCAAGAAGTCGAATGAGTTTGGTGAAACAAAATCCCGTT
. : . : . : . : . : . :
rJMSF004G15- TAAGTGACAAAATACTTCAAATTGGATATAAGGCTATTAAGTAATGCTGACAGTTGTTTA
rJMFF051P23- TAAGTGACAAAATACTTCAAATTGGATATAAGGCTATTAAGTAATGCTGACAGTTGTTTA
JMFN015D06- TAAGTGACAAAATACTTCAAATTGGATATAAGGCTATTAAGTAATGCTGACAGTTGTTTA
rJMFF035L23- TAAGTGACAAAATACTTCAAATTGGATATAAGGCTATTAAGTAATGCTGACAGTTGTTTA
rJMSF042A10- TAAGTGACAAAATACTTCAAATTGGATATAAGGCTATTAAGTAATGCTGACAGTTGTTTA
rJMSF037N13- TAAGTGACAAAATACTTCAAATTGGATATAAGGCTATTAAGTAATGCTGACAGTTGTTTA
rJMFF032L13- AAATACTTCAAATTGGATATAAGGCTATTAAGTAATGCTGACAGTTGTTTA
rJMFF025I14- TTTA
rJMFF047H17- TTTA
rJMSF009C23- TAAGTGACAAAATACTTCAAATTGGATATAAGGCTATTAAGTAATGCTGACAGTTGTTTA
rJMSF024O24- TAAGTGACAAAATACTTCAAATTGGATATAAGGCTATTAAGTAATGCTGACAGTTGTTTA
____________________________________________________________
consensus TAAGTGACAAAATACTTCAAATTGGATATAAGGCTATTAAGTAATGCTGACAGTTGTTTA
. : . : . : . : . : . :
rJMSF004G15- AGCAGTGGTTGCAGACTGAGCAGCAAGCCTCTTCTTGGCTTCTTCAATGATGGACAACTT
rJMFF051P23- AGCAGTGGTTGCAGACTGAGCAGCAAGCCTCTTCTTGGCTTCTTCAATGATGGACAACTT
JMFN015D06- AGCAGTGGTTGCAGACTGAGCAGCAAGCCTCTTCTTGGCTTCTTCAATGATGGACAACTT
rJMFF035L23- AGCAGTGGTTGCAGACTGAGCAGCAAGCCTCTTCTTGGCTTCTTCAATGATGGACAACTT
rJMSF042A10- AGCAGTGGTTGCAGACTGAGCAGCAAGCCTCTTCTTGGCTTCTTCAATGATGGACAACTT
rJMSF037N13- AGCAGTGGTTGCAGACTGAGCAGCAAGCCTCTTCTTGGCTTCTTCAATGATGGACAACTT
rJMFF032L13- AGCAGTGGTTGCAGACTGAGCAGCAAGCCTCTTCTTGGCTTCTTCAATGATGGACAACTT
rJMFF025I14- AGCAGTGGTTGCAGACTGAGCAGCAAGCCTCTTCTTGGCTTCTTCAATGATGGACAACTT
rJMFF047H17- AGCAGTGGTTGCAGACTGAGCAGCAAGCCTCTTCTTGGCTTCTTCAATGATGGACAACTT
rJMSF009C23- AGCAGTGGTTGCAGACTGAGCAGCAAGCCTCTTCTTGGCTTCTTCAATGATGGACAACTT
rJMSF024O24- AGCAGTGGTTGCAGACTGAGCAGCAAGCCTCTTCTTGGCTTCTTCAATGATGGACAACTT
____________________________________________________________
consensus AGCAGTGGTTGCAGACTGAGCAGCAAGCCTCTTCTTGGCTTCTTCAATGATGGACAACTT
. : . : . : . : . : . :
rJMSF004G15- GATACCTTTCCCCTTGGGTAGAGATACCCAGGGCTTGGTACCTTTGCCAATGGTGTACAC
rJMFF051P23- GATACCTTTCCCCTTGGGTAGAGATACCCAGGGCTTGGTACCTTTGCCAATGGTGTACAC
JMFN015D06- GATACCTTTCCCCTTGGGTAGAGATACCCAGGGCTTGGTACCTTTGCCAATGGTGTACAC
rJMFF035L23- GATACCTTTCCCCTTGGGTAGAGATACCCAGGGCTTGGTACCTTTGCCAATGGTGTACAC
rJMSF042A10- GATACCTTTCCCCTTGGGTAGAGATACCCAGGGCTTGGTACCTTTGCCAATGGTGTACAC
rJMSF037N13- GATACCTTTCCCCTTGGGTAGAGATACCCAGGGCTTGGTACCTTTGCCAATGGTGTACAC
rJMFF032L13- GATACCTTTCCCCTTGGGTAGAGATACCCAGGGCTTGGTACCTTTGCCAATGGTGTACAC
rJMFF025I14- GATACCTTTCCCCTTGGGTAGAGATACCCAGGGCTTGGTACCTTTGCCAATGGTGTACAC
rJMFF047H17- GATACCTTTCCCCTTGGGTAGAGATACCCAGGGCTTGGTACCTTTGCCAATGGTGTACAC
rJMSF009C23- GATACCTTTCCCCTTGGGTAGAGATACCCAGGGCTTGGTACCTTTGCCAATGGTGTACAC
rJMSF024O24- GATACCTTTCCCCTTGGGTAGAGATACCCAGGGCTTGGTACCTTTGCCAATGGTGTACAC
____________________________________________________________
consensus GATACCTTTCCCCTTGGGTAGAGATACCCAGGGCTTGGTACCTTTGCCAATGGTGTACAC
. : . : . : . : . : . :
rJMSF004G15- ATTTCCTAAGCGGGTAACAAACTCGTGTCCAANGNAATCCTGAATGT
rJMFF051P23- ATTTCCTAAGCGGGTAGCAAACTCGTGTCCAAGGGAATCCTGAATGTGGACAGTCTCAAA
JMFN015D06- ATTTCCTAAGCGGGTAGCAAACTCGTGTCCAAGGGAATCCTGAATGTGGACAGTCTCAAA
rJMFF035L23- ATTTCCTAAGCGGGTAGCAAACTCGTGTCCAAGGGAATCCTGAATGTGGACAGTCTCAAA
rJMSF042A10- ATTTCCTAAGCGGGTAGCAAACTCGTGTCCAAGGGAATCCTGAATGTGGACAGTCTCAAA
rJMSF037N13- ATTTCCTAAGCGGGTAGCAAACTCGTGTCCAAGGGAATCCTGAATGTGGACAGTCTCAAA
rJMFF032L13- ATTTCCTAAGCGGGTAGCAAACTCGTGTCCAAGGGAATCCTGAATGTGGACAGTCTCAAA
rJMFF025I14- ATTTCCTAAGCGGGTAGCAAACTCGTGTCCAAGGGAATCCTGAATGTGGACAGTCTCAAA
rJMFF047H17- ATTTCCTAAGCGGGTAGCAAACTCGTGTCCAAGGGAATCCTGAATGTGGACAGTCTCAAA
rJMSF009C23- ATTTCCTAAGCGGGTAGCAAACTCGTGTCCAAGGGAATCCTGAATGTGGACAGTCTCAAA
rJMSF024O24- ATTTCCTAAGCGGGTAGCAAACTCGTGTCCAAGGGAATCCTGAATGTGGACAGTCTCAAA
JMSF042A10+ AGCGGGTAGCAAACTCGTGTCCAAGGGAATCCTGAATGTGGACAGTCTCAAA
____________________________________________________________
consensus ATTTCCTAAGCGGGTAGCAAACTCGTGTCCAAGGGAATCCTGAATGTGGACAGTCTCAAA
. : . : . : . : . : . :
rJMFF051P23- GCTACCCTTGTGTTTCTCCCTGTTCTTAAGCACTCCAACACGCCCCCTGTTTCTACCACC
JMFN015D06- GCTACCCTTGTGTTTCTCCCTGTTCTTAAGCACTCCAACACGCCCCCTGTTTCTTCCACC
rJMFF035L23- GCTACCCTTGTGTTTCTCCCTGTTCTTAAGCACTCCAACACGCCCCCTGTTTCTTCCACC
rJMSF042A10- GCTACCCTTGTGTTTCTCCCTGTTCTTAAGCACTCCAACACGCCCCCTGTTTCTTCCACC
rJMSF037N13- GCTACCCTTGTGTTTCTCCCTGTTCTTAAGCACTCCAACACGCCCCCTGTTTCTTCCACC
rJMFF032L13- GCTACCCTTGTGTTTCTCCCTGTTCTTAAGCACTCCAACACGCCCCCTGTTTCTTCCACC
rJMFF025I14- GCTACCCTTGTGTTTCTCCCTGTTCTTAAGCACTCCAACACGCCCCCTGTTTCTTCCACC
rJMFF047H17- GCTACCCTTGTGTTTCTCCCTGTTCTTAAGCACTCCAACACGCCCCCTGTTTCTTCCACC
rJMSF009C23- GCTACCCTTGTGTTTCTCCCTGTTCTTAAGCACTCCAACACGCCCCCTGTTTCTTCCACC
rJMSF024O24- GCTACCCTTGTGTTTCTCCCTGTTCTTAAGCACTCCAACACGCCCCCTGTTTCTTCCACC
JMSF037N13+ ACGCCCCCTGTTTCTTCCACC
JMSF042A10+ GCTACCCTTGTGTTTCTCCCTGTTCTTAAGCACTCCAACACGCCCCCTGTTTCTTCCACC
____________________________________________________________
consensus GCTACCCTTGTGTTTCTCCCTGTTCTTAAGCACTCCAACACGCCCCCTGTTTCTTCCACC
. : . : . : . : . : . :
rJMFF051P23- AGTCACCATAACAACATTTCCAACATCAAACTTGATGAAGTCAACAATCTTGTTGCTCTC
JMFN015D06- AGTCACCATAACAACATTTCCAACATCAAACTTGATGAAGTCAACAATCTTGTTGCTCTC
rJMFF035L23- AGTCACCATAACAACATTTCCAACATCAAACTTGATGAAGTCAACAATCTTGTTGCTCTC
rJMSF042A10- AGTCACCATAACAACATTTCCAACATCAAACTTGATGAAGTCAACAATCTTGTTGCTCTC
rJMSF037N13- AGTCACCATAACAACATTTCCAACATCAAACTTGATGAAGTCAACAATCTTGTTGCTCTC
rJMFF032L13- AGTCACCATAACAACATTTCCAACATCAAACTTGATGAAGTCAACAATCTTGTTGCTCTC
rJMFF025I14- AGTCACCATAACAACATTTCCAACATCAAACTTGATGAAGTCAACAATCTTGTTGCTCTC
rJMFF047H17- AGTCACCATAACAACATTTCCAACATCAAACTTGATGAAGTCAACAATCTTGTTGCTCTC
rJMSF009C23- AGTCACCATAACAACATTTCCAACATCAAACTTGATGAAGTCAACAATCTTGTTGCTCTC
rJMSF024O24- AGTCACCATAACAACATTTCCAACATCAAACTTGATGAAGTCAACAATCTTGTTGCTCTC
JMSF037N13+ AGTCACCATAACAACATTTCCAACATCAAACTTGATGAAGTCAACAATCTTGTTGCTCTC
JMSF042A10+ AGTCACCATAACAACATTTCCAACATCAAACTTGATGAAGTCAACAATCTTGTTGCTCTC
JMFF047H17+ AACATCAAACTGNATGAAGTCAACAATCTTGTTGCTCTC
JMFF025I14+ TCTC
JMFF051P23+ TTCCAACATCAAACTGNATGAAGTCAACAATC-TGTTGCTCTC
JMSF024O24+ TTCCAACATCAAACTTGATGAAGTCAACAATCTTGTTGCTCTC
____________________________________________________________
consensus AGTCACCATAACAACATTTCCAACATCAAACTTGATGAAGTCAACAATCTTGTTGCTCTC
. : . : . : . : . : . :
rJMFF051P23- CAAGTCCAACTTGACAGTGTCGTTGGCCTTGATGANGGGATCAGG
JMFN015D06- CAAGTCCAACTTGACAGTGTCGTTGGCCTTGATGAGGGGATCAGGATAACGGATGGTCCT
rJMFF035L23- CAAGTCCAGCTTGACAGTGTCGTTGGCCTTGATGAGGGGATCAGGATAACGGATGGTCCT
rJMSF042A10- CAAGTCCAACTTGACAGTGTCGTTGGCCTTGATGAGGGGATCAGGATAACGGATGGTCCT
rJMSF037N13- CAAGTCCAACTTGACAGTGTCGTTGGCCTTGATGAGGGGATCAGGATAACGGATGGTCCT
rJMFF032L13- CAAGTCCAACTTGACAGTGTCGTTGGCCTTGATGAGGGGATCAGGATAACGGATGGTCCT
rJMFF025I14- CAAGTCCAACTTGACAGTGTCGTTGGCCTTGATGAGGGGATCAGGATAACGGATGGTCCT
rJMFF047H17- CAAGTCCAACTTGACAGTGTCGTTGGCCTTGATGAGGGGATCAGGA
rJMSF009C23- CAAGTCCAACTTGACAGTGTCGTTGGCCTTGATGAGGGGATCAGGATAACGGATGGTCCT
rJMSF024O24- CAAGTCCAACTTGACAGTGTCGTTGGCCTTGATGAGGGGATCAGGATAACGGATGGTCCT
JMSF037N13+ CAAGTCCAACTTGACAGTGTCGTTGGCCTTGATGAGGGGATCAGGATAACGGATGGTCCT
JMSF042A10+ CAAGTCCAACTTGACAGTGTCGTTGGCCTTGATGAGGGGATCAGGATAACGGATGGTCCT
JMFF028P19+ GATGAGGGGATCAGGATAACGGATGGTCCT
JMFF047H17+ CAAGTCCAACTTGACAGTGTCGTTGGCCTTGATGAGGGGATCAGGATAACGGATGGTCCT
JMFF025I14+ CAAGTCCAACTTGACAGTGTCGTTGGCCTTGATGAGGGGATCAGGATAACGGATGGTCCT
JMFF051P23+ CAAGTCCAACTGACNAGTGTCGTTGGCCTGNATGAGGGGATCAGGATAACGGATGGTCCT
JMFF032L13+ GATGAGGGGATCAGGATAACGGATGGTCCT
JMSF024O24+ CAAGTCCAACTTGACAGTGTCGTTGGCCTTGATGAGGGGATCAGGATAACGGATGGTCCT
____________________________________________________________
consensus CAAGTCCAACTTGACAGTGTCGTTGGCCTTGATGAGGGGATCAGGATAACGGATGGTCCT
. : . : . : . : . : . :
JMFN015D06- GCCATCATAGGTATTAATATATGGAATTCCCTTCTTTCCAAATTGCACAGAGCGGACCTT
rJMFF035L23- GCCATCATAGGTATTAATATATGGAATTCCCTTCTTTCCAAATTGCACAGAGCGGACCTT
rJMSF042A10- GCCATCATAGGTATTAATATATGGAATTCCCTTCTTTCCAAATTGCACAGAGCGGACCTT
rJMSF037N13- GCCATCATAGGTATTAATATATGGAATTCCCTTCTTTCCAAATTGCACAGAGCGGACCTT
rJMFF032L13- GCCATCATAGGTATTAATATATGGTATTCCCTTCTTTCCAAATTGCACAGAGCGGACCTT
rJMFF025I14- GCCATCATAGGTATTAATATATGGAATTCCCTTCTTTCCAAATTGCACAGAGCGGACCTT
rJMSF009C23- GCCATCATAGGTATTAATATATGGAATTCCCTTCTTTCCAAATTGCACAGAGCGGACCTT
rJMSF024O24- GCCATCATAGGTATTAATATATGGAATTCCCTTCTTTCCAAATTGCACAGAGCGGACCTT
JMSF037N13+ GCCATCATAGGTATTAATATATGGAATTCCCTTCTTTCCAAATTGCACAGAGCGGACCTT
JMSF042A10+ GCCATCATAGGTATTAATATATGGAATTCCCTTCTTTCCAAATTGCACAGAGCGGACCTT
JMFF028P19+ GCCATCATAGGTATTAATATATGGAATTCCCTTCTTTCCAAATTGCACAGAGCGGACCTT
JMFF047H17+ GCCATCATAGGTATTAATATATGGAATTCCCTTCTTTCCAAATTGCACAGAGCGGACCTT
JMFF025I14+ GCCATCATAGGTATTAATATATGGAATTCCCTTCTTTCCAAATTGCACAGAGCGGACCTT
JMFF051P23+ GCCATCATAGGTATTAATATATGGAATTCCCTTCTTTCCAAATTGCACAGAGCGGACCTT
JMFF032L13+ GCCATCATAGGTATTAATATATGGTATTCCCTTCTTTCCAAATTGCACAGAGCGGACCTT
JMSF024O24+ GCCATCATAGGTATTAATATATGGAATTCCCTTCTTTCCAAATTGCACAGAGCGGACCTT
JMFF035L23+ TCTTTCCAAATTGCACAGAGCGGACCTT
____________________________________________________________
consensus GCCATCATAGGTATTAATATATGGAATTCCCTTCTTTCCAAATTGCACAGAGCGGACCTT
. : . : . : . : . : . :
JMFN015D06- GCAAAGCTTAAACTTTGC
rJMFF035L23- GCAAAGCTTAAACTTTGCCTCTTCATCTCTAATGGAGTGAAGACGGAACCGTCCTTTGGT
rJMSF042A10- GCAAAGCTTAAACTTTGCCTCTTCATCTCTAATGGAGTGAAGACGGAACCGTCCTTTGGT
rJMSF037N13- GCAAAGCTTAAACTTTGCCTCTTCATCTCTAATGGAGTGAAGGCGGAACCGTCCTTTGGT
rJMFF032L13- GCAAAGCTTAAACTTTGCCTCTTCATCTCTAATGGAGTGAAGACGGAACCGTCCTTTGGT
rJMFF025I14- GCAAAGCTTAAACTTTGCCTCTTCATCTCTAATGGAGTGAAGACGGAACCGTCCTTTGGT
rJMSF009C23- GCAAAGCTTAAACTTTGCCTCTTCATCTCTAATGGAGTGAAGACGGAACCGTCCTTTGGT
rJMSF024O24- GCAAAGCTTAAACTTTGCCTCTTCATCTCTAATGGAGTGAAGACGGAACCGTCCTTTGGT
JMSF037N13+ GCAAAGCTTAAACTTTGCCTCTTCATCTCTAATGGAGTGAAGGCGGAACCGTCCTTTGGT
JMSF042A10+ GCAAAGCTTAAACTTTGCCTCTTCATCTCTAATGGAGTGAAGACGGAACCGTCCTTTGGT
JMFF028P19+ GCAAAGCTTAAACTTTGCCTCTTCATCTCTAATGGAGTGAAGACGGAACCGTCCTTTGGT
JMFF047H17+ GCAAAGCTTAAACTTTGCCTCTTCATCTCTAATGGAGTGAAGACGGAACCGTCCTTTGGT
JMFF025I14+ GCAAAGCTTAAACTTTGCCTCTTCATCTCTAATGGAGTGAAGACGGAACCGTCCTTTGGT
JMFF051P23+ GCAAAGCTTAAACTTTGCCTCTTCATCTCTAATGGAGTGAAGACGGAACCGTCCTTTGGT
JMFF032L13+ GCAAAGCTTAAACTTTGCCTCTTCATCTCTAATGGAGTGAAGACGGAACCGTCCTTTGGT
JMSF024O24+ GCAAAGCTTAAACTTTGCCTCTTCATCTCTAATGGAGTGAAGACGGAACCGTCCTTTGGT
JMFF035L23+ GCAAAGCTTAAACTTTGCCTCTTCATCTCTAATGGAGTGAAGACGGAACCGTCCTTTGGT
____________________________________________________________
consensus GCAAAGCTTAAACTTTGCCTCTTCATCTCTAATGGAGTGAAGACGGAACCGTCCTTTGGT
. : . : . : . : . : . :
rJMFF035L23- ATCATAAAGTAGGCGGAAGTTCTCATTTGTCTTANGAATTGAAACAACATCCATG
rJMSF042A10- ATCATAAAGTAGGCGGAAGTTCTCATTTGTCTTAGGAATTGAAACAACATCCATGAA
rJMSF037N13- ATCATAAAGTAGGCGGAAGTTCTCATTTGTCTTAGGAATTGAAACAACATCCATGAAACC
rJMFF032L13- ATCATAAAGTAGGCGGAAGTTCTCATTTGTCTTAGGAATTGAAACAACATCCATGAAACC
rJMFF025I14- ATCATAA
rJMSF009C23- ATCATAAAGTAGGCGGAAGTTCTCATTTGTCTTAGGAATTGAAACAACATCCATGAAACC
rJMSF024O24- ATCATAAAGTAGGCGGAAGTTCTCATTTGTCTTAGGAATTGAAACAACATCCATGAAACC
JMSF037N13+ ATCATAAAGTAGGCGGAAGTTCTCATTTGTCTTAGGAATTGAAACAACATCCATGAAACC
JMSF042A10+ ATCATAAAGTAGGCGGAAGTTCTCATTTGTCTTAGGAATTGAAACAACATCCATGAAACC
JMFF028P19+ ATCATAAAGTAGGCGGAAGTTCTCATTTGTCTTAGGAATTGAAACAACATCCATGAAACC
JMFF047H17+ ATCATAAAGTAGGCGGAAGTTCTCATTTGTCTTAGGAATTGAAACAACATCCATGAAACC
JMFF025I14+ ATCATAAAGTAGGCGGAAGTTCTCATTTGTCTTAGGAATTGAAACAACATCCATGAAACC
JMFF051P23+ ATCATAAAGTAGGCGGAAGTTCTCATTTGTCTTAGGAATTGAAACAACATCCATGAAACC
JMFF032L13+ ATCATAAAGTAGGCGGAAGTTCTCATTTGTCTTAGGAATTGAAACAACATCCATGAAACC
JMSF024O24+ ATCATAAAGTAGGCGGAAGTTCTCATTTGTCTTAGGAATTGAAACAACATCCATGAAACC
JMFF035L23+ ATCATAAAGTAGGCGGAAGTTCTCATTTGTCTTAGGAATTGAAACAACATCCATGAAACC
JMSF009C23+ CCATGAAACC
JMSF005G15+ AACC
JMSF004G15+ AAACAACATCCATGAAACC
____________________________________________________________
consensus ATCATAAAGTAGGCGGAAGTTCTCATTTGTCTTAGGAATTGAAACAACATCCATGAAACC
. : . : . : . : . : . :
rJMSF037N13- AGCAGGGTAAGTCTTGTCTGTCCTAACCTTTCCATCAACNAGAACATGGCGTTGCATCAA
rJMFF032L13- AGCAGGGTAAGTCTTGTCTGTCCTAACCTTTCCATCAACCAGAACATGGCGTTGCATCAA
rJMSF009C23- AGCAGGGTAAGTCTTGTCTGTCCTAACCTTTCCATCAACCAGAACATGGCGTTGCATCAA
rJMSF024O24- AGCAGGGTAAGTCTTGTCTGTCCTAACCTTTCCATCAACCAGAACATGGCGTTGCATC-A
JMSF037N13+ AGCAGGGTAAGTCTTGTCTGTCCTAACCTTTCCATCAACCAGAACATGGCGTTGCATCAA
JMSF042A10+ AGCAGGGTAAGTCTTGTCTGTCCTAACCTTTCCATCAACCAGAACATGGCGTTGCATCAA
JMFF028P19+ AGCAGGGTAAGTCTTGTCTGTCCTAACCTTTTCATCAACCAGAACATGGCGTTGCATCAA
JMFF047H17+ AGCAGGGTAAGTCTTGTCTGTCCTAACCTTTTCATCAACCAGAACATGGCGTTGCATCAA
JMFF025I14+ AGCAGGGTAAGTCTTGTCTGTCCTAACCTTTCCATCAACCAGAACATGGCGTTGCATCAA
JMFF051P23+ AGCAGGGTAAGTCTTGTCTGTCCTAACCTTTTCATCAACCAGAACATGGCGTTGCATCAA
JMFF032L13+ AGCAGGGTAAGTCTTGTCTGTCCTAACCTTTCCATCAACCAGAACATGGCGTTGCATCAA
JMSF024O24+ AGCAGGGTAAGTCTTGTCTGTCCTAACCTTTCCATCAACCAGAACATGGCGTTGCATCAA
JMFF035L23+ AGCAGGGTAAGTCTTGTCTGTCCTAACCTTTCCATCAGCCAGAACATGGCGTTGCATCAA
JMSF009C23+ AGCAGGGTAAGTCTTGTCTGTCCTAACCTTTCCATCAACCAGAACATGGCGTTGCATCAA
JMSF005G15+ AGCAGGGTAAGTCTTGTCTGTCCTAACCTTTCCATCAACCAGAACATGGCGTTGCATCAA
JMSF004G15+ AGCAGGGTAAGTCTTGTCTGTCCTAACCTTTCCATCAACCAGAACATGGCGTTGCATCAA
____________________________________________________________
consensus AGCAGGGTAAGTCTTGTCTGTCCTAACCTTTCCATCAACCAGAACATGGCGTTGCATCAA
. : . : . : . : . : . :
rJMSF037N13- A
rJMFF032L13- AATTGAAATGACCTCACGATAAGTAAGGGCATACTTAAGCCT
rJMSF009C23- AATTGAAATGACCTCACGATAAGTAAGGGCATACTTAAGCCTGTTTCGAATGATGAGGAC
rJMSF024O24- AATTGAAATGACCTCACGATAAGTAAGGGCATACTTAAGCCTGTTTCGAATGATGAGGAC
JMSF037N13+ AATTGAAATGACCTCACGATAAGTAAGGGCATACTTAAGCCTGTTTCGAATGATGAGGAC
JMSF042A10+ AATTGAAATGACCTCACGATAAGTAAGGGCATACTTAAGCCTGTTTCGAATGATGAGGAC
JMFF028P19+ AATTGAAATGACCTCACGATAAGTAAGGGCATACTTAAGCCTGTTTCGAATGATGAGGAC
JMFF047H17+ AATTGAAATGACCTCACGATAAGTAAGGGCATACTTAAGCCTGTTTCGAATGATGAGGAC
JMFF025I14+ AATTGAAATGACCTCACGATAAGTAAGGGCATACTTAAGCCTGTTTCGAATGATGAGGAC
JMFF051P23+ AATTGAAATGACCTCACGATAAGTAAGGGCATACTTAAGCCTGTTTCGAATGATGAGGAC
JMFF032L13+ AATTGAAATGACCTCACGATAAGTAAGGGCATACTTAAGCCTGTTTCGAAAGATGAGGAC
JMSF024O24+ AATTGAAATGACCTCACGATAAGTAAGGGCATACTTAAGCCTGTTTCGAATGATGAGGAC
JMFF035L23+ AATTGAAATGACCTCACGATAAGTAAGGGCATACTTAAGCCTGTTTCGAATGATGAGGAC
JMSF009C23+ AATTGAAATGACCTCACGATAAGTAAGGGCATACTTAAGCCTGTTTCGAATGATGAGGAC
JMSF005G15+ AATTGAAATGACCTCACGATAAGTAAGGGCATACTTAAGCCTGTTTCGAATGATGAGGAC
JMSF004G15+ AATTGAAATGACCTCACGATAAGTAAGGGCATACTTAAGCCTGTTTCGAATGATGAGGAC
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consensus AATTGAAATGACCTCACGATAAGTAAGGGCATACTTAAGCCTGTTTCGAATGATGAGGAC
. : . : . : . : . : . :
rJMSF024O24- C
JMSF037N13+ CAATGGCAAACACTCCCTTGACTTGTGAGGTCCAGAGGAAGGCTTAGGGGCAAAAGCTCC
JMSF042A10+ CAATGGCAAACACTCCCTTGACTTGTGAGGTCCAGAGGAAGGCTTAGGGGCAAAAGCTCC
JMFF028P19+ CAATGGCAAACACTCCCTTGACTTGTGAGGTCCAGAGGAAGGCTTAGGGGCAAAAGCTCC
JMFF047H17+ CAATGGCAAACACTCCCTTGACTTGTGAGGTCCAGAGGAAGGCTTAGGGGCAAAAGCTCC
JMFF025I14+ CAATGGCAAACACTCCCTTGACTTGTGAGGTCCAGAGGAAGGCTTAGGGGCAAAAGCTCC
JMFF051P23+ CAATGGCAAACACTCCCTTGACTTGTGAGGTCCAGAGGAAGGCTTAGGGGCAAAAGCTCC
JMFF032L13+ CAATGGCAAACACTCCCTTGACTTGTGAGGTCCAGAGGAAGGCTTAGGGGCAAAAGCTCC
JMSF024O24+ CAATGGCAAACACTCCCTTGACTTGTGAGGTCCAGAGGAAGGCTTAGGGGCAAAAGCTCC
JMFF035L23+ CAATGGCAAACACTCCCTTGACTTGTGAGGTCCAGAGGAAGGCTTAGGGGCAAAAGCTCC
JMSF009C23+ CAATGGCAAACACTCCCTTGACTTGTGAGGTCCAGAGGAAGGCTTAGGGGCAAAAGCTCC
JMSF005G15+ CAATGGCAAACACTCCCTTGACTTGTGAGGTCCAGAGGAAGGCTTAGGGGCAAAAGCTCC
JMSF004G15+ CAATGGCAAACACTCCCTTGACTTGTGAGGTCCAGAGGAAGGCTTAGGGGCAAAAGCTCC
____________________________________________________________
consensus CAATGGCAAACACTCCCTTGACTTGTGAGGTCCAGAGGAAGGCTTAGGGGCAAAAGCTCC
. : . : . : . : . : . :
JMSF037N13+ CCCAAGTTTGTCAAGCATCCAATGCTTAGGGGCATTGAGCCTCTTCATGTGCTTCTTCAA
JMSF042A10+ CCCAAGTTTGTCAAGCAT-CAATGCTTAGGGGCATTGAGCCTCTTCATGTGCTTCTTCAA
JMFF028P19+ CCCAAGTTTGTCAAGCATCCAATGCTTAGGGGCATTGAGCCTCTTCATGTGCTTCTTCAA
JMFF047H17+ CCCAAGTTTGTCAAGCATCCAATGCTTAGGGGCATTGAGCCTCTTCATGTGCTTCTTCAA
JMFF025I14+ CCCAAGTTTGTCAAGCATCCAATGCTTAGGGGCATTGAGCCTCTTCATGTGCTTCTTCAA
JMFF051P23+ CCCAAGTTTGTCAAGCATCCAATGCTTAGGGGCATTGAGCCTCTTCATGTGCTTCTTCAA
JMFF032L13+ CCCAAGTTTGTCAAGCATCCAATGCTTAGGGGCATTGAGCCTCTTCATGTGCTTCTTCAA
JMSF024O24+ CCCAAGTTTGTCAAGCATCCAATGCTTAGGGGCATTGAGCCTCTTCATGTGCTTCTTCAA
JMFF035L23+ CCCAAGTTTGTCAAGCATCCAATGCTTAGGGGCATTGAGCCTCTTCATGTGCTTCTTCAA
JMSF009C23+ CCCAAGTTTGTCAAGCATCCAATGCTTAGGGGCATTGAGCCTCTTCATGTGCTTCTTCAA
JMSF005G15+ CCCAAGTTTGTCAAGCATCCAATGCTTAGGGGCATTGAGCCTCTTCATGTGCTTCTTCAA
JMSF004G15+ CCCAAGTTTGTCAAGCATCCAATGCTTAGGGGCATTGAGCCTCTTCATGTGCTTCTTCAA
____________________________________________________________
consensus CCCAAGTTTGTCAAGCATCCAATGCTTAGGGGCATTGAGCCTCTTCATGTGCTTCTTCAA
. : . : . : . : . : . :
JMSF037N13+ CCCTCTCGCCATGTTGGTGGTGGTGAACTGAGAATCGCCGCCGCTCTAAGTGTTCAGCCT
JMSF042A10+ CCCTCTCGCCATGTTGGTGGTGGTGAACTGAGAATCGCCGCCGCTCTAAGTGTTCAGCCT
JMFF028P19+ CCCTCTCGCCATGTTGGTGGTGGTGAACTGAGAATCGCCGCCGCTCTAAGTGTTCAGCCT
JMFF047H17+ CCCTCTCGCCATGTTGGTGGTGGTGAACTGAGAATCGCCGCCGCTCTAAGTGTTCAGCCT
JMFF025I14+ CCCTCTCGCCATGTTGGTGGTGGTGAACTGAGAATCGCCGCCGCTCTAAGTGTTCAGCCT
JMFF051P23+ CCCTCTCGCCATGTTGGTGGTGGTGAACTGAGAATCGCCGCCGCTCTAAGTGTTCAGCCT
JMFF032L13+ CCCTCTCGCCATGTTGGTGGTGGTGAACTGAGAATCGCCGCCGCTCTAAGTGTTCAGCCT
JMSF024O24+ CCCTCTCGCCATGTTGGTGGTGGTGAACTGAGAATCGCCGCCGCTCTAAGTGTTCAGCCT
JMFF035L23+ CCCTCTCGCCATGTTGGTGGTGGTGAACTGAGAATCGCCGCCGCTCTAAGTGTTCAGCCT
JMSF009C23+ CCCTCTCGCCATGTTGGTGGTGGTGAACTGAGAATCGCCGCCGCTCTAAGTGTTCAGCCT
JMSF005G15+ CCCTCTCGCCATGTTGGTGGTGGTGAACTGAGAATCGCCGCCGCTCTAAGTGTTCAGCCT
JMSF004G15+ CCCTCTCGCCATGTTGGTGGTGGTGAACTGAGAATCGCCGCCGCTCTAAGTGTTCAGCCT
____________________________________________________________
consensus CCCTCTCGCCATGTTGGTGGTGGTGAACTGAGAATCGCCGCCGCTCTAAGTGTTCAGCCT
. : . : . : . : . : . :
JMSF037N13+ CCG-CAGCTGTTCTGTAGGGTTCGGCCGCTTGATGCTGAAACTGCC
JMSF042A10+ CCGCCGGCTGTTCTGTAGGGTTCGGCCGCTTGATGCTGAAACTGCCACTTCAAA
JMFF028P19+ CCGCCGGCTGTTCTGTAGGGTTCGGCCGCTTGATGCTGAAACTGCCACTTCAAAG
JMFF047H17+ CCGCCGGCTGTTCTGTAGGGTTCGGCCGCTTGATGCTGAAACTGCCACTTCAAAG
JMFF025I14+ CCGCCGGCTGTTCTGTAGGGTTCGGCCGCTTGATGCTGAAACTGCCACTTCAAAG
JMFF051P23+ CCGCCGGCTGTTCTGTAGGGTTCGGCCGCTTGATGCTGAAACTGCCACTTCAAAG
JMFF032L13+ CCGCCGGCTGTTCTGTAGGGTTCGGCCGCTTGATGCTGAAACTGCCACTTCAAAGGC
JMSF024O24+ CCGCCGGCTGTTCTGTAGGGTTCGGCCGCTTGATGCTGAAACTGCCACTTCAAAGGCT
JMFF035L23+ CCGCCGGCTGTTCTGTAGGGTTCGGCCGCTTGATGCTGAAACTGCCACTTCAAAGGCTT
JMSF009C23+ CCGCCGGCTGTTCTGTAGGGTTCGGCCGCTTGATGCTGAAACTGCCACTTCAAAGGCTT
JMSF005G15+ CCGCCGGCTGTTCTGTAGGGTTCGGCCGCTTGATGCTGAAACTGCCACTTCAAAGGCTT
JMSF004G15+ CCGCCGGCTGTTCTGTAGGGTTCGGCCGCTTGATGCTGAAACTGCCACTTCAAAGGCTTC
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consensus CCGCCGGCTGTTCTGTAGGGTTCGGCCGCTTGATGCTGAAACTGCCACTTCAAAGGCTTC