clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMCP005A01 | Sequence | 584 | 003115 (8) | ref|XP_011003162.1| | 7e-91 | PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica] | |||||
JMFF013K16 | Sequence | 617 | 003115 (8) | ref|XP_011003162.1| | 3e-90 | PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica] | 683 | 003115 (8) | ref|XP_002525394.1| | 3e-66 | ubiquitin, putative [Ricinus communis] ref|XP_009617530.1| PREDICTED: ubiquitin- |
JMFF013O20 | Sequence | 594 | 003115 (8) | ref|XP_011003162.1| | 2e-90 | PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica] | 514 | 003115 (8) | ref|XP_002525394.1| | 6e-45 | ubiquitin, putative [Ricinus communis] ref|XP_009617530.1| PREDICTED: ubiquitin- |
JMFF023C03 | Sequence | 561 | 003115 (8) | ref|XP_011003162.1| | 1e-90 | PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica] | 677 | 003115 (8) | ref|XP_011003162.1| | 3e-89 | PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica] |
JMFN019B18 | Sequence | 426 | 003115 (8) | ref|XP_011003162.1| | 1e-41 | PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig003115============================================ 620 106 ----------------------------------------------------------------------------------------------->JMFF013O20 <--------------------------------------------------------rJMFF013O20 106 --------------------------------------------------------------------------------------------------->JMFF013K16 <---------------------------------------------------------------------------------rJMFF013K16 133 ---------------------------------------------------------------------------------------->JMFF023C03 <---------------------------------------------------------------------------rJMFF023C03
The following clones don't have the opposite end in this pair.
-------------------------------------------------------------------->JMFN019B18- ---------------------------------------------------------------------------------------------->rJMCP005A01-