| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMCP005A01 | Sequence | 584 | 003115 (8) | ref|XP_011003162.1| | 7e-91 | PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica] | |||||
| JMFF013K16 | Sequence | 617 | 003115 (8) | ref|XP_011003162.1| | 3e-90 | PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica] | 683 | 003115 (8) | ref|XP_002525394.1| | 3e-66 | ubiquitin, putative [Ricinus communis] ref|XP_009617530.1| PREDICTED: ubiquitin- |
| JMFF013O20 | Sequence | 594 | 003115 (8) | ref|XP_011003162.1| | 2e-90 | PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica] | 514 | 003115 (8) | ref|XP_002525394.1| | 6e-45 | ubiquitin, putative [Ricinus communis] ref|XP_009617530.1| PREDICTED: ubiquitin- |
| JMFF023C03 | Sequence | 561 | 003115 (8) | ref|XP_011003162.1| | 1e-90 | PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica] | 677 | 003115 (8) | ref|XP_011003162.1| | 3e-89 | PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica] |
| JMFN019B18 | Sequence | 426 | 003115 (8) | ref|XP_011003162.1| | 1e-41 | PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica] | |||||
This contig is upended
. : . : . : . : . : . :
JMFF013K16+ ATGCGAAAATACAACATATA
____________________________________________________________
consensus ATGCGAAAATACAACATATA
. : . : . : . : . : . :
JMFF013O20+ AAACTCAGTATCAATACTCAAAACTTTGATCGATCATGGATGGAGGAGTGATCAGTG
rJMCP005A01+ AGTATCAATACTCAAAACTTTGATCGATCATcGtacGAGGAGTGATCAGTG
JMFF023C03+ AATACTCAAAACTTTGATCGATCATGGATGGAGGAGTGATCAGTG
JMFF013K16+ ACGAAACTCAGTATCAATACTCAAAACTTTGATCGATCATGGATGGAGGAGTGATCAGTG
____________________________________________________________
consensus ACGAAACTCAGTATCAATACTCAAAACTTTGATCGATCATGGATGGAGGAGTGATCAGTG
. : . : . : . : . : . :
JMFF013O20+ ATCAATCGGAACCAGCTTTATTGTAAACATATGTGAGGCCGCACTTACCACAGTAGTGAC
rJMCP005A01+ ATCAATCGGAACCAGCTTTATTGTAAACATATGTGAGGCCGCACTTACCACAGTAGTGAC
rJMFF023C03- GTAAACATATGTGAGGCCGCACTTACCACAGTAGTGAC
JMFF023C03+ ATCAATCGGAACCAGCTTTATTGTAAACATATGTGAGGCCGCACTTACCACAGTAGTGAC
rJMFF013K16- ACATATGTGAGGCCGCACTTACCACAGTAGTGAC
rJMFF013O20- GTAAACATATGTGAGGCCGCACTTACCACAGTAGTGAC
JMFF013K16+ ATCAATCGGAACCAGCTTTATTGTAAACATATGTGAGGCCGCACTTACCACAGTAGTGAC
____________________________________________________________
consensus ATCAATCGGAACCAGCTTTATTGTAAACATATGTGAGGCCGCACTTACCACAGTAGTGAC
. : . : . : . : . : . :
JMFF013O20+ GATCGAAGTGGTTGGCCATGAAGGTGCCAGCGCCGCACTCAGCATTGGGGCACTCCTTCC
rJMCP005A01+ GATCGAAGTGGTTGGCCATGAAGGTGCCAGCGCCGCACTCAGCATTGGGGCACTCCTTCC
rJMFF023C03- GATCGAAGTGGTTGGCCATGAAGGTGCCAGCGCCGCACTCAGCATTGGGGCACTCCTTCC
JMFF023C03+ GATCGAAGTGGTTGGCCATGAAGGTGCCAGCGCCGCACTCAGCATTGGGGCACTCCTTCC
rJMFF013K16- GATCGAAGTGGTTGGCCATGAAGGTGCCAGCGCCGCACTCAGCATTGGGGCACTCCTTCC
rJMFF013O20- GATCGAAGTGGTTGGCCATGAAGGTGCCAGCGCCGCACTCAGCATTGGGGCACTCCTTCC
JMFN019B18+ AGCGCCGCACTCAGCATTGGGGCACTCCTTCA
JMFF013K16+ GATCGAAGTGGTTGGCCATGAAGGTGCCAGCGCCGCACTCAGCATTGGGGCACTCCTTCC
____________________________________________________________
consensus GATCGAAGTGGTTGGCCATGAAGGTGCCAGCGCCGCACTCAGCATTGGGGCACTCCTTCC
. : . : . : . : . : . :
JMFF013O20+ TAAGCCTCTGCACCTTCCCGGACTCATCTACCTTGTAGAACTGCAGCACCGCCAGCTTCA
rJMCP005A01+ TAAGCCTCTGCACCTTCCCGGACTCATCTACCTTGTAGAACTGCAGCACCGCCAGCTTCA
rJMFF023C03- TAAGCCTCTGCACCTTCCCGGACTCATCTACCTTGTAGAACTGCAGCACCGCCAGCTTCA
JMFF023C03+ TAAGCCTCTGCACCTTCCCGGACTCATCTACCTTGTAGAACTGCAGCACCGCCAGCTTCA
rJMFF013K16- TAAGCCTCTGCACCTTCCCGGACTCATCTACCTTGTAGAACTGCAGCACCGCCAGCTTCA
rJMFF013O20- TAAGCCTCTGCACCTTCCCGGACTCATCTACCTTGTAGAACTGCAGCACCGCCAGCTTCA
JMFN019B18+ TAAGCCTCTGCACCTTCCCGGACTCATCTACCTTGTAGAACTGCAGCACCGCCAGCTTCA
JMFF013K16+ TAAGCCTCTGCACCTTCCCGGACTCATCTACCTTGTAGAACTGCAGCACCGCCAGCTTCA
____________________________________________________________
consensus TAAGCCTCTGCACCTTCCCGGACTCATCTACCTTGTAGAACTGCAGCACCGCCAGCTTCA
. : . : . : . : . : . :
JMFF013O20+ CCTTNTTATGCTTGTGCTTGATCTTCTTCGGCTTGGTGTAGGTCTTCTTCTTCCTCTTCT
rJMCP005A01+ CCTTCTTATGCTTGTGCTTGATCTTCTTCGGCTTGGTGTAGGTCTTCTTCTTCCTCTTCT
rJMFF023C03- CCTTCTTATGCTTGTGCTTGATCTTCCTCGGCTTGGTGTAGGTCTTCTTCTTCCTCTTCT
JMFF023C03+ CCTTCTTATGCTTGTGCTTGATCTTCCTCGGCTTGGTGTAGGTCTTCTTCTTCCTCTTCT
rJMFF013K16- CCTTCTTATGCTTGTGCTTGATCTTCTTCGGCTTGGTGTAGGTCTTCTTCTTCCTCTTCT
rJMFF013O20- CCTTCTTATGCTTGTGCTTGATCTTCTTCGGCTTGGTGTAGGTCTTCTTCTTCCTCTTCT
JMFN019B18+ CCTTCTTATGCTTGTGCTTGATCTTCTTCGGCTTGGTGTAGGTCTTCTTCTTCCTCTTCT
JMFF013K16+ CCTTCTTATGCTTGTGCTTGATCTTCTTCGGCTTGGTGTAGGTCTTCTTCTTCCTCTTCT
____________________________________________________________
consensus CCTTCTTATGCTTGTGCTTGATCTTCTTCGGCTTGGTGTAGGTCTTCTTCTTCCTCTTCT
. : . : . : . : . : . :
JMFF013O20+ TCGCGCCACCACGGAGGCGAAGCACCAGGTGGAGAGTAGACTCTTTCTGGATGTTGTAGT
rJMCP005A01+ TCGCGCCACCACGGAGGCGAAGCACCAGGTGGAGAGTAGACTCTTTCTGGATGTTGTAGT
rJMFF023C03- TCGCGCCACCACGGAGGCGAAGCACCAGGTGGAGAGTAGACTCTTTCTGGATGTTGTAGT
JMFF023C03+ TCGCGCCACCACGGAGGCGAAGCACCAGGTGGAGAGTAGACTCTTTCTGGATGTTGTAGT
rJMFF013K16- TCGCGCCACCACGGAGGCGAAGCACCAGGTGGAGAGTAGACTCTTTCTGGATGTTGTAGT
rJMFF013O20- TCGCGCCACCACGGAGGCGAAGCACCAGGTGGAGAGTAGACTCTTTCTGGATGTTGNAGT
JMFN019B18+ TCGCGCCACCACGGAGGCGAAGCACCAGGTGGAGAGTAGACTCTTTCT-GNNNNNNTGTT
JMFF013K16+ TCGCGCCACCACGGAGGCGAAGCACCAGGTGGAGAGTAGACTCTTTCTGGATGTTGTAGT
____________________________________________________________
consensus TCGCGCCACCACGGAGGCGAAGCACCAGGTGGAGAGTAGACTCTTTCTGGATGTTGTAGT
. : . : . : . : . : . :
JMFF013O20+ CCGCC-AAGGTCCGCCCGTCCTCCAGCTGCTTTCCG-GCGAAGATGAGCCGCTGCTGGTC
rJMCP005A01+ CCGCC-AAGGTCCGCCCGTCCTCCAGCTGCTTTCCG-GCGAAGATGAGCCGCTGCTGGTC
rJMFF023C03- CCGCC-AAGGTCCGCCCGTCCTCCAGCTGCTTTCCG-GCGAAGATGAGCCGCTGCTGGTC
JMFF023C03+ CCGCC-AAGGTCCGCCCGTCCTCCAGCTGCTTTCCG-GCGAAGATGAGCCGCTGCTGGTC
rJMFF013K16- CCGCC-AAGGTCCGCCCGTCCTCCAGCTGCTTTCCG-GCGAAGATGAGCCGCTGCTGGTC
rJMFF013O20- CCGCCAAAGGTCCGCCCGTCCTCCAGCTGCTTTCCG-GAGAAGATGAGCCGCTGCTGGTC
JMFN019B18+ ATTAC-CAGGTCCGCCCGTCCTGCAAATGCTTTCCGNNNTACAAAAAAAAACTACTGGTC
JMFF013K16+ CCGCC-AAGGTCCGCCCGTCCTCCAGCTGCTTTCCG-GCGAAGATGAGCCGCTGCTGGTC
____________________________________________________________
consensus CCGCC-AAGGTCCGCCCGTCCTCCAGCTGCTTTCCG-GCGAAGATGAGCCGCTGCTGGTC
. : . : . : . : . : . :
JMFF013O20+ AGGTGGGATTCCCTCCTTGTCTTGAATTTTC-GCCTTCACATTGTCGATGGTGTCGGAGG
rJMCP005A01+ AGGTGGGATCCCCTCCTTGTCTTGAATTTTC-GCCTTCACATTGTCGATGGTGTCGGAGG
rJMFF023C03- AGGTGGGATTCCCTCCTTGTCTTGAATTTTC-GCCTTCACATTGTCGATGGTGTCGGAGG
JMFF023C03+ AGGTGGGATTCCCTCCTTGTCTTGAATTTTC-GCCTTCACATTGTCGATGGTGTCGGAGG
rJMFF013K16- AGGTGGGATTCCCTCCTTGTCTTGAATTTTCGGCCTTCACATTGTCGATGGTGTCGGAGG
rJMFF013O20- AGGNGGGATTCCCTCC
JMFN019B18+ AAGTGGGGATCCCTCCCTGTCTTGAAATTTC-GCCTTCACAATGTCTATGGTGTCGGAGG
JMFF013K16+ AGGTGGGATTCCCTCCTTGTCTTGAATTTTC-GCCTTCACATTGTCGATGGTGTCGGAGG
____________________________________________________________
consensus AGGTGGGATTCCCTCCTTGTCTTGAATTTTC-GCCTTCACATTGTCGATGGTGTCGGAGG
. : . : . : . : . : . :
JMFF013O20+ ATTCCACCTCCAGGGTTATGGTCTTCCCCGTCAGGGTTTTCACGAAGATCTGCATCTTTG
rJMCP005A01+ ATTCCACCTCCAGGGTTATGGTCTTCCCCGTCAGGGTTTTCACGAAGATCTGCATCTTTG
rJMFF023C03- ATTCCACCTCCAGGGTTATGGTCTTCCCCGTCAGGGTTTTCACGAAGATCTGCATCTTTG
JMFF023C03+ ATTCCACCTCCAGGGTTATGGTCTTCCCCGTCAGGGTTTTCACGAAGATCTGCATCTTTG
rJMFF013K16- ATTCCACCTCCAGGGTTATGGTCTTCCCCGTCAGGGTTTTCACGAAGATCTGCATCTTTG
JMFN019B18+ ATTCCACCAGCAGGGTTATGGTCTTCCCCGTCAGGGTTTTCACGAAGATCTGCATCTTTG
JMFF013K16+ ATTCCACCTCCAGGGTTATGGTCTTCCCCGTCAGGGTTTTCACGAAGATCTGCATCTTTG
____________________________________________________________
consensus ATTCCACCTCCAGGGTTATGGTCTTCCCCGTCAGGGTTTTCACGAAGATCTGCATCTTTG
. : . : . : . : . : . :
JMFF013O20+ CCTGCTGGAAGAGACGCCGACGCCTCCTTGTCTTCTGTTCCTGTTCAACGATTGAT
rJMCP005A01+ CCTGCTGGAAGAGACGCCGACGCCTCCTTGTCTTCTGTTCCTGTTCAACGATTGAT
rJMFF023C03- CCTGCTGGAAGA
JMFF023C03+ CCTGCTGGAAGAGACGCCGACGCCTCCTT
rJMFF013K16- CCTGCTGGAAGAGACGCCGACGCCTCCTTGTCTTCTGTTCCTGTTCAACGATTGAT
JMFN019B18+ CCTGCTGGAAGAGACGCCGACGCCTCCTTGTCTTCTG
JMFF013K16+ CCTGCTGGAAGAGACGCCGACGCCTCCTTGTCTTCTGTTCCTGTTCAACGATTGATTAAT
____________________________________________________________
consensus CCTGCTGGAAGAGACGCCGACGCCTCCTTGTCTTCTGTTCCTGTTCAACGATTGATTAAT