clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF010F15 | Sequence | 653 | 011014 (10) | ref|XP_002279938.1| | 1e-69 | PREDICTED: eukaryotic translation initiation factor 1A [Vitis vinifera] ref|XP_ | 726 | 011014 (10) | gb|KHG13840.1| | 1e-65 | Eukaryotic translation initiation factor 1A [Gossypium arboreum] |
JMFF014E22 | Sequence | 513 | 011014 (10) | gb|KHG13840.1| | 1e-66 | Eukaryotic translation initiation factor 1A [Gossypium arboreum] | 688 | 011014 (10) | gb|KHG13840.1| | 9e-66 | Eukaryotic translation initiation factor 1A [Gossypium arboreum] |
JMFF014J14 | Sequence | 518 | 011014 (10) | ref|XP_002279938.1| | 3e-70 | PREDICTED: eukaryotic translation initiation factor 1A [Vitis vinifera] ref|XP_ | 714 | 011014 (10) | gb|KHG13840.1| | 1e-65 | Eukaryotic translation initiation factor 1A [Gossypium arboreum] |
JMFF022N23 | Sequence | 445 | 011014 (10) | gb|KHG13840.1| | 2e-65 | Eukaryotic translation initiation factor 1A [Gossypium arboreum] | 729 | 011014 (10) | gb|KHG13840.1| | 1e-65 | Eukaryotic translation initiation factor 1A [Gossypium arboreum] |
JMSF030J17 | Sequence | 666 | 011014 (10) | gb|KHG13840.1| | 7e-66 | Eukaryotic translation initiation factor 1A [Gossypium arboreum] | 659 | 011014 (10) | gb|KHG13840.1| | 7e-66 | Eukaryotic translation initiation factor 1A [Gossypium arboreum] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig011014============================================ 691 4 ------------------------------------------------------------------------->JMFF014E22 <--------------------------------------------------------------------------------------------------rJMFF014E22 34 ----------------------------------------------------------------------------------------------->JMSF030J17 <----------------------------------------------------------------------------------------------rJMSF030J17 147 --------------------------------------------------------------->JMFF022N23 <------------------------------------------------------------------------------rJMFF022N23 147 -------------------------------------------------------------------------------------------->JMFF010F15 <------------------------------------------------------------------------------rJMFF010F15 150 -------------------------------------------------------------------------->JMFF014J14 <--------------------------------------------------------------------------rJMFF014J14
The following clones don't have the opposite end in this pair.