clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF040N07 | Sequence | 157 | 013138 (8) | 404 | 013138 (8) | gb|KJB83618.1| | 2e-31 | hypothetical protein B456_013G255200 [Gossypium raimondii] | |||
JMFN010E08 | Sequence | 627 | 013138 (8) | ref|NP_001234402.1| | 1e-62 | ripening regulated protein DDTFR10 [Solanum lycopersicum] gb|AAG49034.1|AF204787 | |||||
JMFS086E06 | Sequence | 626 | 013138 (8) | ref|NP_001234402.1| | 5e-56 | ripening regulated protein DDTFR10 [Solanum lycopersicum] gb|AAG49034.1|AF204787 | |||||
JMSF032N15 | Sequence | 681 | 013138 (8) | ref|NP_001234402.1| | 2e-67 | ripening regulated protein DDTFR10 [Solanum lycopersicum] gb|AAG49034.1|AF204787 | 609 | 013138 (8) | ref|XP_002283673.1| | 3e-58 | PREDICTED: elongation factor 1-delta [Vitis vinifera] |
JMSF046P14 | Sequence | 728 | 013138 (8) | ref|NP_001234402.1| | 2e-79 | ripening regulated protein DDTFR10 [Solanum lycopersicum] gb|AAG49034.1|AF204787 | 642 | 013138 (8) | ref|XP_006365638.1| | 3e-65 | PREDICTED: elongation factor 1-delta 1-like isoform X1 [Solanum tuberosum] ref| |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig013138============================================ 979 9 --------------->JMFF040N07 <----------------------------------------rJMFF040N07 125 -------------------------------------------------------------------->JMSF032N15 <-----------------------------------------------------rJMSF032N15 125 ------------------------------------------------------------------------->JMSF046P14 <--------------------------------------------------------rJMSF046P14
The following clones don't have the opposite end in this pair.
--------------------------------------------------------------->JMFS086E06- --------------------------------------------------------------->JMFN010E08-