| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF009A21 | Sequence | 354 | 005600 (16) | gb|KJB33992.1| | 2e-37 | hypothetical protein B456_006G042400 [Gossypium raimondii] | 691 | 005600 (16) | gb|KJB33991.1| | 1e-79 | hypothetical protein B456_006G042400 [Gossypium raimondii] gb|KJB33993.1| hypoth |
| JMFF024P05 | Sequence | 471 | 005600 (16) | gb|KJB33991.1| | 3e-64 | hypothetical protein B456_006G042400 [Gossypium raimondii] gb|KJB33993.1| hypoth | 691 | 005600 (16) | gb|KJB33991.1| | 8e-80 | hypothetical protein B456_006G042400 [Gossypium raimondii] gb|KJB33993.1| hypoth |
| JMFF045F07 | Sequence | 647 | 005600 (16) | ref|XP_011097277.1| | 2e-76 | PREDICTED: 50S ribosomal protein L27, chloroplastic-like [Sesamum indicum] | 649 | 005600 (16) | ref|XP_011097277.1| | 3e-77 | PREDICTED: 50S ribosomal protein L27, chloroplastic-like [Sesamum indicum] |
| JMFN006H04 | Sequence | 616 | 005600 (16) | gb|KJB33991.1| | 3e-80 | hypothetical protein B456_006G042400 [Gossypium raimondii] gb|KJB33993.1| hypoth | |||||
| JMFN007A10 | Sequence | 641 | 005600 (16) | gb|KJB33991.1| | 4e-80 | hypothetical protein B456_006G042400 [Gossypium raimondii] gb|KJB33993.1| hypoth | |||||
| JMSF003P14 | Sequence | 258 | 005600 (16) | gb|KJB33992.1| | 2e-20 | hypothetical protein B456_006G042400 [Gossypium raimondii] | 789 | 005600 (16) | ref|XP_011097277.1| | 1e-75 | PREDICTED: 50S ribosomal protein L27, chloroplastic-like [Sesamum indicum] |
| JMSF020H17 | Sequence | 667 | 005600 (16) | gb|KJB33991.1| | 1e-85 | hypothetical protein B456_006G042400 [Gossypium raimondii] gb|KJB33993.1| hypoth | 732 | 005600 (16) | gb|KJB33991.1| | 2e-79 | hypothetical protein B456_006G042400 [Gossypium raimondii] gb|KJB33993.1| hypoth |
| JMSF040A05 | Sequence | 164 | 005600 (16) | ||||||||
| JMSF042P03 | Sequence | 749 | 005600 (16) | ref|XP_011097277.1| | 3e-70 | PREDICTED: 50S ribosomal protein L27, chloroplastic-like [Sesamum indicum] | 677 | 005600 (16) | ref|XP_011097277.1| | 1e-70 | PREDICTED: 50S ribosomal protein L27, chloroplastic-like [Sesamum indicum] |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig005600============================================ 859 55 ----------------------------->JMSF003P14 <--------------------------------------------------------------------------------------------rJMSF003P14 132 ----------------------------------------------------------------------------->JMSF020H17 <------------------------------------------------------------------------------------rJMSF020H17 142 --------------------------------------------------------------------------->JMFF045F07 <-----------------------------------------------------------------------rJMFF045F07 155 ---------------------------------------->JMFF009A21 <--------------------------------------------------------------------------------rJMFF009A21 163 ------------------------------------------------------>JMFF024P05 <--------------------------------------------------------------------------------rJMFF024P05 169 ------------------------------------------------------------------------------------->JMSF042P03 <------------------------------------------------------------------------------rJMSF042P03
The following clones don't have the opposite end in this pair.
----------------------------------------------------------------------->JMFN006H04- <------------------rJMSF040A05- <----------------------------------------------------------------rJMFF044E16* ------------------------------------------------------------------------->JMFN007A10-