| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF009A21 | Sequence | 354 | 005600 (16) | gb|KJB33992.1| | 2e-37 | hypothetical protein B456_006G042400 [Gossypium raimondii] | 691 | 005600 (16) | gb|KJB33991.1| | 1e-79 | hypothetical protein B456_006G042400 [Gossypium raimondii] gb|KJB33993.1| hypoth |
| JMFF024P05 | Sequence | 471 | 005600 (16) | gb|KJB33991.1| | 3e-64 | hypothetical protein B456_006G042400 [Gossypium raimondii] gb|KJB33993.1| hypoth | 691 | 005600 (16) | gb|KJB33991.1| | 8e-80 | hypothetical protein B456_006G042400 [Gossypium raimondii] gb|KJB33993.1| hypoth |
| JMFF044E16 | Sequence | 629 | 012864 (35) | dbj|BAO57280.1| | 6e-107 | alpha-expansin [Ipomoea nil] | 568 | 005600 (16) | ref|XP_011097277.1| | 1e-70 | PREDICTED: 50S ribosomal protein L27, chloroplastic-like [Sesamum indicum] |
| JMFF045F07 | Sequence | 647 | 005600 (16) | ref|XP_011097277.1| | 2e-76 | PREDICTED: 50S ribosomal protein L27, chloroplastic-like [Sesamum indicum] | 649 | 005600 (16) | ref|XP_011097277.1| | 3e-77 | PREDICTED: 50S ribosomal protein L27, chloroplastic-like [Sesamum indicum] |
| JMFN006H04 | Sequence | 616 | 005600 (16) | gb|KJB33991.1| | 3e-80 | hypothetical protein B456_006G042400 [Gossypium raimondii] gb|KJB33993.1| hypoth | |||||
| JMFN007A10 | Sequence | 641 | 005600 (16) | gb|KJB33991.1| | 4e-80 | hypothetical protein B456_006G042400 [Gossypium raimondii] gb|KJB33993.1| hypoth | |||||
| JMSF003P14 | Sequence | 258 | 005600 (16) | gb|KJB33992.1| | 2e-20 | hypothetical protein B456_006G042400 [Gossypium raimondii] | 789 | 005600 (16) | ref|XP_011097277.1| | 1e-75 | PREDICTED: 50S ribosomal protein L27, chloroplastic-like [Sesamum indicum] |
| JMSF020H17 | Sequence | 667 | 005600 (16) | gb|KJB33991.1| | 1e-85 | hypothetical protein B456_006G042400 [Gossypium raimondii] gb|KJB33993.1| hypoth | 732 | 005600 (16) | gb|KJB33991.1| | 2e-79 | hypothetical protein B456_006G042400 [Gossypium raimondii] gb|KJB33993.1| hypoth |
| JMSF040A05 | Sequence | 164 | 005600 (16) | ||||||||
| JMSF042P03 | Sequence | 749 | 005600 (16) | ref|XP_011097277.1| | 3e-70 | PREDICTED: 50S ribosomal protein L27, chloroplastic-like [Sesamum indicum] | 677 | 005600 (16) | ref|XP_011097277.1| | 1e-70 | PREDICTED: 50S ribosomal protein L27, chloroplastic-like [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
rJMSF040A05+ GAGCCTATAAGCCTNGAAG
____________________________________________________________
consensus GAGCCTATAAGCCTNGAAG
. : . : . : . : . : . :
rJMSF040A05+ TNGAAATAAGGAGATAAGGTTTTAAATCTGCGTTTGTAGTCCGACCAGACAGACCAGCAG
JMSF020H17- AAGGTTTTAAATCTGCGTTTGTAGTCCGACCAGACAGACCAGCAG
JMSF003P14- TAGTCCGACCAGACAGACCAGCAG
rJMFF009A21+ GTTTGTAGTCCGACCAGACAGACCAGCAG
rJMFF024P05+ AATTCTGCGTTTGTAGTCCGACCAGACAGACCAGCAG
JMFF045F07- AATTCTGCGTTTGTAGTCCGACCAGACAGACCAGCAG
JMFF024P05- AATTCTGCGTTTGTAGTCCGACCAGACAGACCAGCAG
JMFF009A21- AATTCTGCGTTTGTAGTCCGACCAGACAGACCAGCAG
rJMSF020H17+ AAGGTTTTAAATCTGCGTTTGTAGTCCGACCAGACAGACCAGCAG
rJMSF042P03+ CGACCAGACAGACCAGCAG
JMFN006H04- CGACCAGACAGACCAGCAG
JMFN007A10- CGACCAGACAGACCAGCAG
JMSF042P03- GCGTTTGTAGTCCGACCAGACAGACCAGCAG
rJMSF003P14+ CCAGACAGACCAGCAG
____________________________________________________________
consensus TNGAAATAAGGAGATAAGGTTTTAATTCTGCGTTTGTAGTCCGACCAGACAGACCAGCAG
. : . : . : . : . : . :
rJMSF040A05+ CGCCAGGCGTAGAATGGCGAGCGCAATGATGAGTTTGAATCTAGTAGGAGCTTTCAAAGG
JMSF020H17- CGCCNG-----GAATGGCGAGCGCAATGATGAGTTTGAATCTAGTAGGAGCTTTCAAAGG
JMSF003P14- CGCCAG-----GAATGGCGAGCACAATGATGAGTTTGAATCTAGTAGGAGCTTTCAAAGG
rJMFF009A21+ CGCCAG-----GAATGGCGAGCGCAATGATGAGTTTGAATCTAGTAGGAGCTTTCAAAGG
rJMFF024P05+ CGCCAG-----GAATGGCGAGCGCAATGATGAGTTTGAATCTAGTAGGAGCTTTCAAAGG
JMFF045F07- CGCCAG-----GAATGGCGAGCGCAATGATGAGTTTGAATCTAGTAGGAGCTTTCAAAGG
JMFF024P05- CGCCAG-----GAATGGCGAGCGCAATGATGAGTTTGAATCTAGTAGGAGCTTTCAAAGG
JMFF009A21- CGCCAG-----GAATGGCGAGCGCAATGATGAGTTTGAATCTAGTAGGAGCTTTCAAAGG
rJMSF020H17+ CGCCAG-----GAATGGCGAGCGCAATGATGAGTTTGAATCTAGTAGGAGCTTTCAAAGG
rJMSF042P03+ CGCCAGGCGTAGAATGGCGAGCGCAATGATGAGTTTGAATCTAGTAGGAGCTTTCAAAGG
JMFN006H04- CGCCAGGCGTAGAATGGCGAGCGCAATGATGAGTTTGAATCTAGTAGGAGCTTTCAAAGG
JMFN007A10- CGCCAGGCGTAGAATGGCGAGCGCAATGATGAGTTTGAATCTAGTAGGAGCTTTCAAAGG
JMSF042P03- CGCCAGGCGTAGAATGGCGAGCGCAATGATGAGTTTGAATCTAGTAGGAGCTTTCAAAGG
rJMSF003P14+ CGCCAG-----GAATGGCGAGCACAATGATGAG-TTGAATCTAGTAGGAGCTTTCNAAGG
____________________________________________________________
consensus CGCCAG-----GAATGGCGAGCGCAATGATGAGTTTGAATCTAGTAGGAGCTTTCAAAGG
. : . : . : . : . : . :
rJMSF040A05+ ACTGTCCTTAAATTCGAGCTCTTCC
JMSF020H17- ACTGTCCTTAAATTCGAGCTCTTCCTCGGCTTTCGTGAGAGGTGAGTTGGGTCCGGTTGA
JMSF003P14- ACTGTCCTTAAATTCGAGCTCTTCCTCGGCTTTCGTGAGAGGTGAGTTGGGTCCGGTTGA
rJMFF009A21+ ACTGTCCTTAAATTCGAGCTCTTCCTCGGCTTTCGTGAGAGGTGAGTTGGGTCCGGTTGA
rJMFF024P05+ ACTGTCCTTAAATTCGAGCTCTTCCTCGGCTTTCGTGAGAGGTGAGTTGGGTCCGGTTGA
JMFF045F07- ACTGTCCTTAAATTCGAGCTCTTCCTCGGCTTTCGTGAGAGGTGAGTTGGGTCCGGTTGA
JMFF024P05- ACTGTCCTTAAATTCGAGCTCTTCCTCGGCTTTCGTGAGAGGTGAGTTGGGTCCGGTTGA
JMFF009A21- ACTGTCCTTAAATTCGAGCTCTTCCTCGGCTTTCGTGAGAGGTGAGTTGGGTCCGGTTGA
rJMSF020H17+ ACTGTCCTTAAATTCGAGCTCTTCCTCGGCTTTCGTGAGAGGTGAGTTGGGTCCGGTTGA
rJMSF042P03+ ACTGTCCTTAAATTCGAGCTCTTCCTCGGCTTTCGTGAGAGGTGAGTTGGGTCCGGTTGA
JMFN006H04- ACTGTCCTTAAATTCGAGCTCTTCCTCGGCTTTCGTGAGAGGTGAGTTGGGTCCGGTTGA
JMFN007A10- ACTGTCCTTAAATTCGAGCTCTTCCTCGGCTTTCGTGAGAGGTGAGTTGGGTCCGGTTGA
JMSF042P03- ACTGTCCTTAAATTCGAGCTCTTCCTCGGCTTTCGTGAGAGGTGAGTTGGGTCCGGTTGA
rJMFF045F07+ CTGTCCTTAAATTCGAGCTCTTCCTCGGCTTTCGTGAGAGGTGAGTTGGGTCCGGTTGA
rJMSF003P14+ ACTGTCCTTAAATTCGAGCTCTTCCTCGGCTTTCGTGAGAGGTGAGTTGGGTCCGGTTGA
____________________________________________________________
consensus ACTGTCCTTAAATTCGAGCTCTTCCTCGGCTTTCGTGAGAGGTGAGTTGGGTCCGGTTGA
. : . : . : . : . : . :
JMSF020H17- TAAGATATCGGTGTCGTTTCCGTTGAAATCTCCGGTAGCGTTGACAATTGAGTCGGCGCA
JMSF003P14- TAAGATATCGGTGTCGTTTCCGTTGAAATCTCCGGTAGCGTTGACAATTGAGTCGGCGCA
rJMFF009A21+ TAAGATATCGGTGTCGTTTCCGTTGAAATCTCCGGTAGCGTTGACAATTGAGTCGGCGCA
rJMFF024P05+ TAAGATATCGGTGTCGTTTCCGTTGAAATCTCCGGTAGCGTTGACAATTGAGTCGGCGCA
JMFF045F07- TAAGATATCGGTGTCGTTTCCGTTGAAATCTCCGGTAGCGTTGACAATTGAGTCGGCGCA
JMFF024P05- TAAGATATCGGTGTCGTTTCCGTTGAAATCTCCGGTAGCGTTGACAATTGAGTCGGCGCA
JMFF009A21- TAAGATATCGGTGTCGTTTCCGTTGAAATCTCCGGTAGCGTTGACAATTGAGTCGGCGCA
rJMSF020H17+ TAAGATATCGGTGTCGTTTCCGTTGAAATCTCCGGTAGCGTTGACAATTGAGTCGGCGCA
rJMSF042P03+ TAAGATATCGGTGTCGTTTCCGTTGAAATCTCC-GTAGCGTTGACAATTGAGTCGGCGCA
JMFN006H04- TAAGATATCGGTGTCGTTTCCGTTGAAATCTCCGGTAGCGTTGACAATTGAGTCGGCGCA
JMFN007A10- TAAGATATCGGTGTCGTTTCCGTTGAAATCTCCGGTAGCGTTGACAATTGAGTCGGCGCA
JMSF042P03- TAAGATATCGGTGTCGTTTCCGTTGAAATCTCC-GTAGCGTTGACAATTGAGTCGGCGCA
rJMFF045F07+ TAAGATATCGGTGTCGTTTCCGTTGAAATCTCCGGTAGCGTTGACAATTGAGTCGGCGCA
rJMFF044E16+ CGGTAGCGTGNACAATTGAGTCGGCGCA
rJMSF003P14+ TAAGATATCGGTGTCGTTTCCGTTGAAATCTCCGGTAGCGTTGACAATTGAGTCGGCGCA
____________________________________________________________
consensus TAAGATATCGGTGTCGTTTCCGTTGAAATCTCCGGTAGCGTTGACAATTGAGTCGGCGCA
. : . : . : . : . : . :
JMSF020H17- CAAGAAGGGGGCTGGAAGTACAAAGAACGGCCGAGACTCACCTGGCCAAAGGCTCGGTGT
JMSF003P14- CAAGAAGGGGGCTGGAAGTACAAAGAACGGCCGAGACTCACCTGGCCAAAGGCTCGG
rJMFF009A21+ CAAGAAGGGGGCTGGAAGTACAAAGAACGGCCGAGACTCACCTGGCCAAAGGCTCGGTGT
rJMFF024P05+ CAAGAAGGGGGCTGGAAGTACAAAGAACGGCCGAGACTCACCTGGCCAAAGGCTCGGTGT
JMFF045F07- CAAGAAGGGGGCTGGAAGTACAAAGAACGGCCGAGACTCACCTGGCCAAAGGCTCGGTGT
JMFF024P05- CAAGAAGGGGGCTGGAAGTACAAAGAACGGCCGAGACTCACCTGGCCAAAGGCTCGGTGT
JMFF009A21- CAAGAAGGGGGCTGGAAGTACAAAGAACGGCCGAGACTCACCTGGCCAAAGGCTCGGTGT
rJMSF020H17+ CAAGAAGGGGGCTGGAAGTACAAAGAACGGCCGAGACTCACCTGGCCAAAGGCTCGGTGT
rJMSF042P03+ CAAGAAGGGGGCTGGAAGTACAAAGAACGGCCGAGACTCACCTGGCCAAAGGCTCGGTGT
JMFN006H04- CAAGAAGGGGGCTGGAAGTACAAAGAACGGCCGAGACTCACCTGGCCAAAGGCTCGGTGT
JMFN007A10- CAAGAAGGGGGCTGGAAGTACAAAGAACGGCCGAGACTCACCTGGCCAAAGGCTCGGTGT
JMSF042P03- CAAGAAGGGGGCTGGAAGTACAAAGAACGGCCGAGACTCACCTGGCCAAAGGCTCGGTGT
rJMFF045F07+ CAAGAAGGGGGCTGGAAGTACAAAGAACGGCCGAGACTCACCTGGCCAAAGGCTCGGTGT
rJMFF044E16+ CAAGAAGGGGGCTGGAAGTACAAAGAACGGCCGAGACTCACCTGGCCAAAGGCTCGGTGT
rJMSF003P14+ CAAGAAGGGGGCTGGAAGTACAAAGAACGGCCGAGACTCACCTGGCCAAAGGCTCGGTGT
____________________________________________________________
consensus CAAGAAGGGGGCTGGAAGTACAAAGAACGGCCGAGACTCACCTGGCCAAAGGCTCGGTGT
. : . : . : . : . : . :
JMSF020H17- CAAAATTTTTGGTGATCAAGCCGCAAAGCCCGGCTCTATTATTGTTCGCCAGCGGGGTAC
rJMFF009A21+ CAAAATTTTTGGTGATCAAGCCGCAAAGCCCGGCTCTATTATTGTTCGCCAGCGGGGTAC
rJMFF024P05+ CAAAATTTTTGGTGATCAAGCCGCAAAGCCCGGCTCTATTATTGTTCGCCAGCGGGGTAC
JMFF045F07- CAAAATTTTTGGTGATCAAGCCGCAAAGCCCGGCTCTATTATTGTTCGCCAGCGGGGTAC
JMFF024P05- CAAAATTTTTGGTGATCAAGCCGCAAAGCCCGGCTCTATTATTGTTCGCCAGCGGGGTAC
JMFF009A21- CAAAATTTTTGGTGATCAAGCCGCAAAGCCCGGCTCTATTATTGTTCGCCAGCGGGGTAC
rJMSF020H17+ CAAAATTTTTGGTGATCAAGCCGCAAAGCCCGGCTCTATTATTGTTCGCCAGCGGGGTAC
rJMSF042P03+ CAAAATTTTTGGTGATCAAGCCGCAAAGCCCGGCTCTATTATTGTTCGCCAGCGGGGTAC
JMFN006H04- CAAAATTTTTGGTGATCAAGCCGCAAAGCCCGGCTCTATTATTGTTCGCCAGCGGGGTAC
JMFN007A10- CAAAATTTTTGGTGATCAAGCCGCAAAGCCCGGCTCTATTATTGTTCGCCAGCGGGGTAC
JMSF042P03- CAAAATTTTTGGTGATCAAGCCGCAAAGCCCGGCTCTATTATTGTTCGCCAGCGGGGTAC
rJMFF045F07+ CAAAATTTTTGGTGATCAAGCCGCAAAGCCCGGCTCTATTATTGTTCGCCAGCGGGGTAC
rJMFF044E16+ CAAAATTTTTGGTGATCAAGCCGCAAAGCCCGGCTCTATTATTGTTCGCCAGCGGGGTAC
rJMSF003P14+ CAAAATTTTTGGTGATCAAGCCGCAAAGCCCGGCTCTATTATTGTTCGCCAGCGGGGTAC
____________________________________________________________
consensus CAAAATTTTTGGTGATCAAGCCGCAAAGCCCGGCTCTATTATTGTTCGCCAGCGGGGTAC
. : . : . : . : . : . :
JMSF020H17- CAAGTTCCATCCAGGGAAGAATGTTGGAATTGGCAAGGATCACACAATCTTTTCCTTGAT
rJMFF009A21+ CAAGTTCCATCCAGGGAAGAATGTTGGAATTGGCAAGGATCACACAATCTTTTCCTTGAT
rJMFF024P05+ CAAGTTCCATCCAGGGAAGAATGTTGGAATTGGCAAGGATCACACAATCTTTTCCTTGAT
JMFF045F07- CAAGTTCCATCCAGGGAAGAATGTTGGAATTGGCAAGGATCACACAATCTTTTCCTTGAT
JMFF024P05- CAAGTTCCATCCAGGGAAGAATGTTGGAATTGGCAAGGATCACACAATCTTTTCCTTGAT
JMFF009A21- CAAGTTCCATCCAGGGAA
rJMSF020H17+ CAAGTTCCATCCAGGGAAGAATGTTGGAATTGGCAAGGATCACACAATCTTTTCCTTGAT
rJMSF042P03+ CAAGTTCCATCCAGGGAAGAATGTTGGAATTGGCAAGGATCACACAATCTTTTCCTTGAT
JMFN006H04- CAAGTTCCATCCAGGGAAGAATGTTGGAATTGGCAAGGATCACACAATCTTTTCCTTGAT
JMFN007A10- CAAGTTCCATCCAGGGAAGAATGTTGGAATTGGCAAGGATCACACAATCTTTTCCTTGAT
JMSF042P03- CAAGTTCCATCCAGGGAAGAATGTTGGAATTGGCAAGGATCACACAATCTTTTCCTTGAT
rJMFF045F07+ CAAGTTCCATCCAGGGAAGAATGTTGGAATTGGCAAGGATCACACAATCTTTTCCTTGAT
rJMFF044E16+ CAAGTTCCATCCAGGGAAGAATGTTGGAATTGGCAAGGATCACACAATCTTTTCCTTGAT
rJMSF003P14+ CAAGTTCCATCCAGGGAAGAATGTTGGAATTGGCAAGGATCACACAATCTTTTCCTTGAT
____________________________________________________________
consensus CAAGTTCCATCCAGGGAAGAATGTTGGAATTGGCAAGGATCACACAATCTTTTCCTTGAT
. : . : . : . : . : . :
JMSF020H17- TGATGGACTGGTCAAATTTGAGAAGTTTGGCCCAGATAGGAAAAAGATTAGTGTGTATCC
rJMFF009A21+ TGATGGACTGGTCAAATTTGAGAAGTTTGGCCCAGATAGGAAAAAGATTAGTGTGTATCC
rJMFF024P05+ TGATGGACTGGTCAAATTTGAGAAGTTTGGCCCAGATAGGAAAAAGATTAGTGTGTATCC
JMFF045F07- TGATGGACTGGTCAAATTTGAGAAGTTTGGCCCAGATAGGAAAAAGATTAGTGTGTATCC
JMFF024P05- TGATGGACTGGTCAAATTTGAGAAGTTTGGCCCAGATAGGAAAAAGATTAGTGTGTATCC
rJMSF020H17+ TGATGGACTGGTCAAATTTGAGAAGTTTGGCCCAGATAGGAAAAAGATTAGTGTGTATCC
rJMSF042P03+ TGATGGACTGGTCAAATTTGAGAAGTTTGGCCCAGATAGGAAAAAGATTAGTGTGTATCC
JMFN006H04- TGATGGACTGGTCAAATTTGAGAAGTTTGGCCCAGATAGGAAAAAGATTAGTGTGTATCC
JMFN007A10- TGATGGACTGGTCAAATTTGAGAAGTTTGGCCCAGATAGGAAAAAGATTAGTGTGTATCC
JMSF042P03- TGATGGACTGGTCAAATTTGAGAAGTTTGGCCCAGATAGGAAAAAGATTAGTGTGTATCC
rJMFF045F07+ TGATGGACTGGTCAAATTTGAGAAGTTTGGCCCAGATAGGAAAAAGATTAGTGTGTATCC
rJMFF044E16+ TGATGGACTGGTCAAATTTGAGAAGTTTGGCCCAGATAGGAAAAAGATTAGTGTGTATCC
rJMSF003P14+ TGATGGACTGGTCAAATTTGAGAAGTTTGGCCCAGATAGGAAAAAGATTAGTGTGTATCC
____________________________________________________________
consensus TGATGGACTGGTCAAATTTGAGAAGTTTGGCCCAGATAGGAAAAAGATTAGTGTGTATCC
. : . : . : . : . : . :
JMSF020H17- ACAAATAGCACAGCCAGAGAACCCCAATAGCTACAGGGCACGAAAGAAGGAGGCGTTTAG
rJMFF009A21+ ACAAATAGCACAGCCAGAGAACCCCAATAGCTACAGGGCACGAAAGAAGGAGGCGTTTAG
rJMFF024P05+ ACAAATAGCACAGCCAGAGAACCCCAATAGCTACAGGGCACGAAAGAAGGAGGCGTTTAG
JMFF045F07- ACAAATAGCACAGCCAGAGAACCCCAATAGCTACAGGGCACGAAAGAAGGAGGCGTTTAG
JMFF024P05- ACAAATAGCACAGCCAGAG
rJMSF020H17+ ACAAATAGCACAGCCAGAGAACCCCAATAGCTACAGGGCACGAAAGAAGGAGGCGTTTAG
rJMSF042P03+ ACAAATAGCACAGCCAGAGAACCCCAATAGCTACAGGGCACGAAAGAAGGAGGCGTTTAG
JMFN006H04- ACAAATAGCACAGCCAGAGAACCCCAATAGCTACAGGGCACGAAAGAAGGAGGCGTTTAG
JMFN007A10- ACAAATAGCACAGCCAGAGAACCCCAATAGCTACAGGGCACGAAAGAAGGAGGCGTTTAG
JMSF042P03- ACAAATAGCACAGCCAGAGAACCCCAATAGCTACAGGGCACGAAAGAAGGAGGCGTTTAG
rJMFF045F07+ ACAAATAGCACAGCCAGAGAACCCCAATAGCTACAGGGCACGAAAGAAGGAGGCGTTTAG
rJMFF044E16+ ACAAATAGCACAGCCAGAGAACCCCAATAGCTACAGGGCACGAAAGAAGGAGGCGTTTAG
rJMSF003P14+ ACAAATAGCACAGCCAGAGAACCCCAATAGCTACAGGGCACGAAAGAAGGAGGCGTTTAG
____________________________________________________________
consensus ACAAATAGCACAGCCAGAGAACCCCAATAGCTACAGGGCACGAAAGAAGGAGGCGTTTAG
. : . : . : . : . : . :
JMSF020H17- ATTACAACGCGAGCGTANAAAGGCACGAAGGGAGGGAAACTTTGACGTTCCACCACAGTT
rJMFF009A21+ ATTACAACGCGAGCGTAGAAAGGCACGAAGGGAGGGAAACTTTGACGTTCCACCACAGTT
rJMFF024P05+ ATTACAACGCGAGCGTAGAAAGGCACGAAGGGAGGGAAACTTTGACGTTCCACCACAGTT
JMFF045F07- ATTACAACGCGAGCGTAGAAAGGCACGAAGGGAGGGAAACTTTGACGTTCCACCACAGTT
rJMSF020H17+ ATTACAACGCGAGCGTAGAAAGGCACGAAGGGAGGGAAACTTTGACGTTCCACCACAGTT
rJMSF042P03+ ATTACAACGCGAGCGTAGAAAGGCACGAAGGGAGGGAAACTTTGACGTTCCACCACAGTT
JMFN006H04- ATTACAACGCGAGCGTAGAAAGGCACGAAGGGAGGGAAACTTTGACGTTCCACCACAGTT
JMFN007A10- ATTACAACGCGAGCGTAGAAAGGCACGAAGGGAGGGAAACTTTGACGTTCCACCACAGTT
JMSF042P03- ATTACAACGCGAGCGTAGAAAGGCACGAAGGGAGGGAAACTTTGACGTTCCACCACAGTT
rJMFF045F07+ ATTACAACGCGAGCGTAGAAAGGCACGAAGGGAGGGAAACTTTGACGTTCCACCACAGTT
rJMFF044E16+ ATTACAACGCGAGCGTAGAAAGGCACGAAGGGAGGGAAACTTTGACGTTCCACCACAGTT
rJMSF003P14+ ATTACAACGCGAGCGTAGAAAGGCACGAAGGGAGGGAAACTTTGACGTTCCACCACAGTT
____________________________________________________________
consensus ATTACAACGCGAGCGTAGAAAGGCACGAAGGGAGGGAAACTTTGACGTTCCACCACAGTT
. : . : . : . : . : . :
JMSF020H17- GCTGGTGCTTGCTTCAGCAGATGAATCCTTGGACAACAATCCNACATGCTGACCTCATCT
rJMFF009A21+ GCTGGTGCTTGCTTCAGCAGATGAATCCTTGGACAACAATCCAACATGCTGACCTCATCT
rJMFF024P05+ GCTGGTGCTTGCTTCAGCAGATGAATCCTTGGACAACAATCCAACATGCTGACCTCATCT
JMFF045F07- GCTGGTGCTTGCTTCAGCAGATGAATCCTNTGGACAC-ATCCAACATGCTGACCTCATCT
rJMSF020H17+ GCTGGTGCTTGCTTCAGCAGATGAATCCTTGGACAACAATCCAACATGCTGACCTCATCT
rJMSF042P03+ GCTGGTGCTTGCTTCAGCAGATGAATCCTTGGACAACAATCCAACATGCTGACCTCATCT
JMFN006H04- GCTGGTGCTTGCTTCAGCAGATGAATCCTTGGACAACAATCCAACATGCTGACCTCA
JMFN007A10- GCTGGTGCTTGCTTCAGCAGATGAATCCTTGGACAACAATCCAACATGCTGACCTCATCT
JMSF042P03- GCTGGTGCTTGCTTCAGCAGATGAATCCTTGGACAACAATCCAACATGCTGACCTCATCT
rJMFF045F07+ GCTGGTGCTTGCTTCAGCAGATGAATCCTTGGACAACAATCCAACATGCTGACCTCATCT
rJMFF044E16+ GCTGGTGCTTGCTTCAGCAGATGAATCCTTGGACAACAATCCAACATGCTGACCTCATCT
rJMSF003P14+ GCTGGTGCTTGCTTCAGCAGATGAATCCTTGGACAACAATCCAACATGCTGACCTCATCT
____________________________________________________________
consensus GCTGGTGCTTGCTTCAGCAGATGAATCCTTGGACAACAATCCAACATGCTGACCTCATCT
. : . : . : . : . : . :
JMSF020H17- GCCAAATTCTCTACTTTTCTGCTTCT
rJMFF009A21+ GCCAAATTCTCTACTTTTCTGCTTCTGTTTGTAAATCAAAGCTACTGCAAAGCACGATAC
rJMFF024P05+ GCCAAATTCTCTACTTTTCTGCTTCTGTTTGTAAATCAAAGCTACTGCAAAGCACGATA
JMFF045F07- GCCAAATTCTCTACTT
rJMSF020H17+ GCCAAATTCTCTACTTTTCTGCTTCTGTTTGTAAATCAAAGCTACTGCAAAGCACGATAC
rJMSF042P03+ GCCAAATTCTCTACTTTTCTGCTTCTGTTTGTAAATCAAAGCTACTGCAAAGCACGATA
JMFN007A10- GCCAAATTCTCTACTTTT
JMSF042P03- GCCAAATTCTCTACTTTTCTGCTTCTGTTTGTAAATCAAAGCTACTGCAAAGCACGATAC
rJMFF045F07+ GCCAAATTCTCTACTTTTCTGCTTCTGTTTGTAAATCAAAGCTACTGCAAAGCACGATAC
rJMFF044E16+ GCCAAATTCTCTACTTTTCTGCTTCTGTTTGTAAATCAAAGCTACTGCAAAGCACGATAC
rJMSF003P14+ GCCAAATTCTCTACTTTTCTGCTTCTGTTTGTAAATCAAAGCTACTGCAAAGCACGATAC
____________________________________________________________
consensus GCCAAATTCTCTACTTTTCTGCTTCTGTTTGTAAATCAAAGCTACTGCAAAGCACGATAC
. : . : . : . : . : . :
rJMFF009A21+ TAAGCAT
rJMSF020H17+ TAAGCATCCGTGTTCTATCTCT
JMSF042P03- TAAGCATCCGTGTTCTATCTCTTGAAATCCATTCCATTTAATTTACGCAA
rJMFF045F07+ TAAGCATCCGTGTTCTATCT
rJMFF044E16+ TAAGCATCCGTGTTCTATCTCTTG-AATCCATTCCATTTAATTTACGCAAGAA
rJMSF003P14+ TAAGCATCCGTGTTCTATCTCTTG-AATCCATTCCATTTAATTTACGCAAGAAGAATGTG
____________________________________________________________
consensus TAAGCATCCGTGTTCTATCTCTTG-AATCCATTCCATTTAATTTACGCAAGAAGAATGTG
. : . : . : . : . : . :
rJMSF003P14+ GTTGGTTATTTGGTTGTTACCTTAAGCTTGCAGTTCACACACCCCTCCCAAGTTTGCTAT
____________________________________________________________
consensus GTTGGTTATTTGGTTGTTACCTTAAGCTTGCAGTTCACACACCCCTCCCAAGTTTGCTAT