clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF010B10 | Sequence | 459 | 004732 (12) | dbj|BAH97744.1| | 3e-44 | hypothetical protein [Hypochaeris radicata] | 433 | 004732 (12) | dbj|BAH97744.1| | 2e-44 | hypothetical protein [Hypochaeris radicata] |
JMFF011M13 | Sequence | 426 | 004732 (12) | dbj|BAH97744.1| | 1e-43 | hypothetical protein [Hypochaeris radicata] | |||||
JMFF013A03 | Sequence | 438 | 004732 (12) | dbj|BAH97744.1| | 2e-44 | hypothetical protein [Hypochaeris radicata] | |||||
JMFF022E08 | Sequence | 466 | 004732 (12) | dbj|BAH97744.1| | 3e-44 | hypothetical protein [Hypochaeris radicata] | 438 | 004732 (12) | dbj|BAH97744.1| | 2e-44 | hypothetical protein [Hypochaeris radicata] |
JMFF022N24 | Sequence | 447 | 004732 (12) | dbj|BAH97744.1| | 3e-44 | hypothetical protein [Hypochaeris radicata] | 424 | 004732 (12) | dbj|BAH97744.1| | 2e-44 | hypothetical protein [Hypochaeris radicata] |
JMFF023D04 | Sequence | 475 | 004732 (12) | dbj|BAH97744.1| | 4e-44 | hypothetical protein [Hypochaeris radicata] | 450 | 004732 (12) | dbj|BAH97744.1| | 3e-44 | hypothetical protein [Hypochaeris radicata] |
JMFN025M14 | Sequence | 460 | 004732 (12) | dbj|BAH97744.1| | 3e-44 | hypothetical protein [Hypochaeris radicata] | |||||
JMFN034P20 | Sequence | 439 | 004732 (12) | dbj|BAH97744.1| | 2e-44 | hypothetical protein [Hypochaeris radicata] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig004732============================================ 467 18 --------------------------------------------------------------->JMFF023D04 <-----------------------------------------------------------------------------------------------rJMFF023D04 29 ------------------------------------------------------------->JMFF022E08 <---------------------------------------------------------------------------------------------rJMFF022E08 37 ----------------------------------------------------------->JMFF010B10 <-------------------------------------------------------------------------------------------rJMFF010B10 44 -------------------------------------------------------------------------------------------->JMFF022N24 <------------------------------------------------------------------------------------------rJMFF022N24
The following clones don't have the opposite end in this pair.
<------------------------------------------------------------------------------------------rJMFF013A03- --------------------------------------------------------------------------------------------->JMFN034P20- -------------------------------------------------------------------------------------------------->JMFN025M14- <-------------------------------------------------------------------------------------rJMFF011M13-