clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF001B23 | Sequence | 811 | 011249 (9) | emb|CDP03661.1| | 6e-139 | unnamed protein product [Coffea canephora] | |||||
JMFF022F22 | Sequence | 533 | 011249 (9) | ref|XP_002300824.2| | 240 | selenocysteine methyltransferase family protein [Populus trichocarpa] gb|EEE8009 | 754 | 011249 (9) | gb|AGG09240.1| | 5e-112 | selenocysteine methyltransferase [Camellia sinensis] gb|AGM15930.1| selenocystei |
JMFF024M22 | Sequence | 529 | 011249 (9) | ref|XP_002300824.2| | 240 | selenocysteine methyltransferase family protein [Populus trichocarpa] gb|EEE8009 | 682 | 011249 (9) | gb|KJB23026.1| | 6e-65 | hypothetical protein B456_004G078000 [Gossypium raimondii] gb|KJB23027.1| hypoth |
JMSF007N08 | Sequence | 272 | 011249 (9) | ref|XP_002300824.2| | 114 | selenocysteine methyltransferase family protein [Populus trichocarpa] gb|EEE8009 | 750 | 011249 (9) | gb|KJB23026.1| | 2e-53 | hypothetical protein B456_004G078000 [Gossypium raimondii] gb|KJB23027.1| hypoth |
JMSF022D04 | Sequence | 689 | 011249 (9) | ref|XP_002300824.2| | 250 | selenocysteine methyltransferase family protein [Populus trichocarpa] gb|EEE8009 | 720 | 011249 (9) | ref|XP_010651998.1| | 3e-86 | PREDICTED: homocysteine S-methyltransferase 2 [Vitis vinifera] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig011249============================================1524 8 ----------------->JMSF007N08 <------------------------------------------------rJMSF007N08 129 ---------------------------------->JMFF024M22 <-------------------------------------------rJMFF024M22 404 ---------------------------------->JMFF022F22 <----------------------------------rJMFF022F22 411 ---------------------------------->JMSF022D04 <--------------------------------------------rJMSF022D04
The following clones don't have the opposite end in this pair.
<--------------------------------------------------rJMFF001B23-