clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF017F20 | Sequence | 525 | 001786 (12) | emb|CDP06371.1| | 2e-04 | unnamed protein product [Coffea canephora] | 642 | 001786 (12) | ref|XP_006381262.1| | 4e-73 | hypothetical protein POPTR_0006s11200g [Populus trichocarpa] ref|XP_006381263.1| |
JMFF048A24 | Sequence | 341 | 001786 (12) | 251 | 001786 (12) | ||||||
JMFF050M08 | Sequence | 583 | 001786 (12) | emb|CDP06371.1| | 9e-22 | unnamed protein product [Coffea canephora] | 574 | 001786 (12) | ref|XP_008245279.1| | 186 | PREDICTED: uncharacterized protein LOC103343395 [Prunus mume] |
JMFS048H05 | Sequence | 522 | 001786 (12) | emb|CDP06371.1| | 2e-27 | unnamed protein product [Coffea canephora] | |||||
JMSF016E15 | Sequence | 466 | 001786 (12) | emb|CDP06371.1| | 2e-05 | unnamed protein product [Coffea canephora] | 697 | 001786 (12) | ref|XP_008245279.1| | 297 | PREDICTED: uncharacterized protein LOC103343395 [Prunus mume] |
JMSF017I02 | Sequence | 456 | 001786 (12) | emb|CDP06371.1| | 3e-07 | unnamed protein product [Coffea canephora] | 673 | 001786 (12) | ref|XP_008245279.1| | 275 | PREDICTED: uncharacterized protein LOC103343395 [Prunus mume] |
JMSF032H21 | Sequence | 488 | 001786 (12) |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig001786============================================1259 1 -------------------------->JMFF048A24 <-------------------rJMFF048A24 55 --------------------------------------->JMFF050M08 <--------------------------------------------rJMFF050M08 70 --------------------------------->JMFF017F20 <--------------------------------------------------rJMFF017F20 85 ---------------------------------->JMSF017I02 <-----------------------------------------------------rJMSF017I02 106 --------------------------------->JMSF016E15 <------------------------------------------------------rJMSF016E15
The following clones don't have the opposite end in this pair.
---------------------------------------->JMFS048H05- ------------------------------>JMSF032H21-