| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF017F20 | Sequence | 525 | 001786 (12) | emb|CDP06371.1| | 2e-04 | unnamed protein product [Coffea canephora] | 642 | 001786 (12) | ref|XP_006381262.1| | 4e-73 | hypothetical protein POPTR_0006s11200g [Populus trichocarpa] ref|XP_006381263.1| |
| JMFF048A24 | Sequence | 341 | 001786 (12) | 251 | 001786 (12) | ||||||
| JMFF050M08 | Sequence | 583 | 001786 (12) | emb|CDP06371.1| | 9e-22 | unnamed protein product [Coffea canephora] | 574 | 001786 (12) | ref|XP_008245279.1| | 186 | PREDICTED: uncharacterized protein LOC103343395 [Prunus mume] |
| JMFS048H05 | Sequence | 522 | 001786 (12) | emb|CDP06371.1| | 2e-27 | unnamed protein product [Coffea canephora] | |||||
| JMSF016E15 | Sequence | 466 | 001786 (12) | emb|CDP06371.1| | 2e-05 | unnamed protein product [Coffea canephora] | 697 | 001786 (12) | ref|XP_008245279.1| | 297 | PREDICTED: uncharacterized protein LOC103343395 [Prunus mume] |
| JMSF017I02 | Sequence | 456 | 001786 (12) | emb|CDP06371.1| | 3e-07 | unnamed protein product [Coffea canephora] | 673 | 001786 (12) | ref|XP_008245279.1| | 275 | PREDICTED: uncharacterized protein LOC103343395 [Prunus mume] |
| JMSF032H21 | Sequence | 488 | 001786 (12) | ||||||||
This contig is upended
. : . : . : . : . : . :
rJMFF048A24- ATCAGAAAGGGTTAAACTAGTTGTCCCTTGAAAGCAACAGAATTTGTTTCCATTTTATT
rJMFF050M08- TTGAAAGCAACAGAATTTGTTTCCATTTTATT
rJMFF017F20- TTTGTTTCCATCTTATT
____________________________________________________________
consensus ATCAGAAAGGGTTAAACTAGTTGTCCCTTGAAAGCAACAGAATTTGTTTCCATTTTATT
. : . : . : . : . : . :
rJMFF048A24- CAGAGCTCANAGGATAAGAAAGAGGAAAACAAACTA-GACCATATAGCTTACAACCCAAA
rJMFF050M08- CAGAGCTCAAAGGATAAGAAAGAGGAAAACAAACTA-GACAATATAGCTTACAACCCAAA
rJMFF017F20- CTGAGCTCNAAGGATAAGAAAGAGGAAAACAAACTANGACAATATAGCTTACAACCCAAA
rJMSF017I02- TAAGAAAGAGGAAAACAAACTA-GACAATATAGCTTACAACCCAAA
rJMSF016E15- AAGAGGAAAACAAACTA-GACAATATAGCTTACAACCCAAA
____________________________________________________________
consensus CAGAGCTCAAAGGATAAGAAAGAGGAAAACAAACTA-GACAATATAGCTTACAACCCAAA
. : . : . : . : . : . :
rJMFF048A24- TCACTTAGAGACAGCAGACTCATTCTGCAAATTCTCACTTTGATTCA-CAACTTCACTCT
rJMFF050M08- TCACTTAGAGACAGCAGACTCATTCTGCAAATTCTCACTTTGATTCACCAACTTCACTCT
rJMFF017F20- TCACTTAGAGACAGCAGACTCATTCTGCAAATTCTCACTTTGATTCACCAACTTCACTCT
rJMSF017I02- TCACTTAGAGACAGCAGACTCATTCTGCAAATTCTCACTTTGATTCACCAACTTCACTCT
rJMSF016E15- TCACTTAGAGACAGCAGACTCATTCTGCAAATTCTCACTTTGATTCACCAACTTCACTCT
____________________________________________________________
consensus TCACTTAGAGACAGCAGACTCATTCTGCAAATTCTCACTTTGATTCACCAACTTCACTCT
. : . : . : . : . : . :
rJMFF048A24- TTCTGCAGCCAATTCATCTTCTTCTACTGCAGCTACGCTCTGAGCGCCTGTCATTCTTGC
rJMFF050M08- TTCTGCAGCCAATTCATCTTCTTCTACTGCAGCTACGCTCTGAGCGCCTGTCATTCTTGC
rJMFF017F20- TTCTGCAGCCAATTCATCTTCTTCTACTGCAGCTACGCTCTGAGCGCCTGTCATTCTTGC
rJMSF017I02- TTCTGCAGCCAATTCATCTTCTTCTACTGCAGCTACGCTCTGAGCGCCTGTCATTCTTGC
rJMSF016E15- TTCTGCAGCCAATTCATCTTCTTCTACTGCAGCTACGCTCTGAGCGCCTGTCATTCTTGC
____________________________________________________________
consensus TTCTGCAGCCAATTCATCTTCTTCTACTGCAGCTACGCTCTGAGCGCCTGTCATTCTTGC
. : . : . : . : . : . :
rJMFF048A24- CAACACCACGAACG
rJMFF050M08- CAACACCACGAACGACACTCCCCCGAGGACATTATTCAGGCATCGCAACACGATAACCGA
rJMFF017F20- CAACACCACGAACGACACTCCCCCGAGGACATTATTCAGGCATCNCAACACGATAACCGA
rJMSF017I02- CAACACCACGAACGACACTCCCCCGAGGACATTATTCAGGCATCGCAACACGATAACCGA
rJMSF016E15- CAACACCACGAACGACACTCCCCCGAGGACATTATTCAGGCATCGCAACACGATAACCGA
____________________________________________________________
consensus CAACACCACGAACGACACTCCCCCGAGGACATTATTCAGGCATCGCAACACGATAACCGA
. : . : . : . : . : . :
rJMFF050M08- GCTCTTGAACACGAAGGGAGAAACCGTCTTGTCCAGCAAGAACTCGATCCCGTTCAGCGT
rJMFF017F20- GCTCTTGAACACGAAGGGAGAAACCGNCTTGTCCAGCAAGAACTCGATCCCGTTCAGCGT
rJMSF017I02- GCTCTTGAACACGAAGGGAGAAACCGTCTTGTCCAGCAAGAACTCGATCCCGTTCAGCGT
rJMSF016E15- GCTCTTGAACACGAAGGGAGAAACCGTCTTGTCCAGCAAGAACTCGATCCCGTTCAGCGT
____________________________________________________________
consensus GCTCTTGAACACGAAGGGAGAAACCGTCTTGTCCAGCAAGAACTCGATCCCGTTCAGCGT
. : . : . : . : . : . :
rJMFF050M08- TTGGTAGCGCAGATTACTGCTAACACCCATGTGGATTGCCCAGGTAGCTGCATTCAGGAT
rJMFF017F20- TTGGTAGCGCAGATTACTGCTAACACCCATGTGGATTGCCCAGGTAGCTGCATTCAGGAT
rJMSF017I02- TTGGTAGCGCAGATTACTGCTAACACCCATGTGGATTGCCCAGGTAGCTGCATTCAGGAT
rJMSF016E15- TTGGTAGCGCAGATTACTGCTAACACCCATGTGGATTGCCCAGGTAGCTGCATTCAGGAT
____________________________________________________________
consensus TTGGTAGCGCAGATTACTGCTAACACCCATGTGGATTGCCCAGGTAGCTGCATTCAGGAT
. : . : . : . : . : . :
rJMFF050M08- GGTGGGTGGAGCCTTGTTTGGTGTTTCGAAACTTGGATCCATCTTCTTCCTGATCTTGAT
rJMFF017F20- GGTGGGTGGAGCCTTGTTTGGTGTTTCGAAACTTGGATCCATCTTCTTCCTGATCTTGAT
rJMSF017I02- GGTGGGTGGAGCCTTGTTTGGTGTTTCGAAACTTGGATCCATCTTCTTCCTGATCTTGAT
rJMSF016E15- GGTGGGTGGAGCCTTGTTTGGTGTTTCGAAACTTGGATCCATCTTCTTCCTGATCTTGAT
____________________________________________________________
consensus GGTGGGTGGAGCCTTGTTTGGTGTTTCGAAACTTGGATCCATCTTCTTCCTGATCTTGAT
. : . : . : . : . : . :
rJMFF050M08- CAGTCCATTCGAGAGGGCGGTTCCCACCAGCCCTGCGGCGAATCCAACCGCAGCAAACAG
rJMFF017F20- CAGTCCATTCGAGAGGGCGGTTCCCACCAGCCCTGCGGCGAATCCAACCGCAGCAAACAG
rJMSF017I02- CAGTCCATTCGAGAGGGCGGTTCCCACCAGCCCTGCGGCGAATCCAACCGCAGCAAACAG
rJMSF016E15- CAGTCCATTCGAGAGGGCGGTTCCCACCAGCCCTGCGGCGAATCCAACCGCAGCAAACAG
____________________________________________________________
consensus CAGTCCATTCGAGAGGGCGGTTCCCACCAGCCCTGCGGCGAATCCAACCGCAGCAAACAG
. : . : . : . : . : . :
rJMFF050M08- AGTGCCCTTGTACACGAAAGTGCCAAGCCTGCTGATCAGACCGTAAGGA
rJMFF017F20- AGTGCCCTTGTACACGAAAGTGCCAAGCCTGCTGATCAGACCGTAAGGACCGGGCTCAAA
rJMSF017I02- AGTGCCCTTGTACACGAAAGTGCCAAGCCTGCTGATCAGACCGTAAGGACCGGGCTCAAA
rJMSF016E15- AGTGCCCTTGTACACGAAAGTGCCAAGCCTGCTGATCAGACCGTAAGGACCGGGCTCAAA
____________________________________________________________
consensus AGTGCCCTTGTACACGAAAGTGCCAAGCCTGCTGATCAGACCGTAAGGACCGGGCTCAAA
. : . : . : . : . : . :
rJMFF017F20- CATGTGGCTTGTGGGACAGCTCGCGAAAATGGAAGGTAAACCCTGGCTTACAGAGGAAGC
rJMSF017I02- CATGTGGCTTGTGGGACAGCTCGCGAAAATGGAAGGTAAACCCTGGCTTACAGAGGAAGC
rJMSF016E15- CATGTGGCTTGTGGGACAGCTCGCGAAAATGGAAGGTAAACCCTGGCTTACAGAGGAAGC
____________________________________________________________
consensus CATGTGGCTTGTGGGACAGCTCGCGAAAATGGAAGGTAAACCCTGGCTTACAGAGGAAGC
. : . : . : . : . : . :
rJMFF017F20- GGTTGGCGCCAAGAGATACATGAGC
rJMSF017I02- GGTTGGCGCCAAGAGATACATGAGCACGAAGTTCAAAATGGAGCCGACGACCAGAGTCGA
rJMSF016E15- GGTTGGCGCCAAGAGATACATGAGCACGAAGTTCAAAATGGAGCCGACGACCAGAGTCGA
JMFS048H05+ GACGACCAGAGTCGA
____________________________________________________________
consensus GGTTGGCGCCAAGAGATACATGAGCACGAAGTTCAAAATGGAGCCGACGACCAGAGTCGA
. : . : . : . : . : . :
rJMSF017I02- GAAGACGAAATCGAGCTCGTTGAGGCCG
rJMSF016E15- GAAGACGAAATCGAGCTCGTTGAGGCCGAAGTTAGGCCGGGAAGCCATGTCGCCGAG
JMFS048H05+ GAAGACGAAATCGAGCTCGTTGAGGCTGAAGTTAGGCCGGGAAGCCATGTCGCCGAGGAC
JMFF050M08+ ACGAAATCGAGCTCGTGNAGGCCGAAGTTAGNCCGGGAAGCCATGTCGCCGAGGAC
____________________________________________________________
consensus GAAGACGAAATCGAGCTCGTTGAGGCCGAAGTTAGGCCGGGAAGCCATGTCGCCGAGGAC
. : . : . : . : . : . :
JMFS048H05+ GCAGGCGGAAACGCCCACCAACTCCTCCATAAGAACCTTGAAAGGGAACTGCGGATCCGC
JMSF016E15+ TCCTCCATAAGAACCTTGAAAGGGAACTGCGGATCCGC
JMFF050M08+ GCAGGCGGAAACGCCCACCAACTCCTCCATAAGAACCTTGAAAGGGAACTGCGGATCCGC
JMSF032H21+ GC
JMFF017F20+ TCCATAAGAACCTTGAAAGGGAACTGCGGATCCGC
JMSF017I02+ TCCTCCATAAGAACCTTGAAAGGGAACTGCGGATCCGC
____________________________________________________________
consensus GCAGGCGGAAACGCCCACCAACTCCTCCATAAGAACCTTGAAAGGGAACTGCGGATCCGC
. : . : . : . : . : . :
JMFS048H05+ AGCAACCCTAGATCTCCACCCACTGAGAAAAGCTCCGATCGGACCGAAACTGTCCCCGGA
JMSF016E15+ AGCAACCCTAGATCTCCACCCACTGAGAAAAGCTCCGATCGGACCGAAACTGTCCCCGGA
JMFF050M08+ AGCAACCCTAGATCTCCACCCACTGAGAAAAGCTCCGATCGGACCGAAACTGTCCCCGGA
JMSF032H21+ AGCAACCCTAGATCTCCACCCACTGAGAAAAGCTCCGATCGGACCGAAACTGTCCCCGGA
JMFF017F20+ AGCAACCCTAGATCTCCACCCACTGAGAAAAGCTCCGATCGGACCGAAACTGTCCCCGGA
JMSF017I02+ AGCAACCCTAGATCTCCACCCACTGAGAAAAGCTCCGATCGGACCGAAACTGTCCCCGGA
____________________________________________________________
consensus AGCAACCCTAGATCTCCACCCACTGAGAAAAGCTCCGATCGGACCGAAACTGTCCCCGGA
. : . : . : . : . : . :
JMFS048H05+ AGATCCGGAATCACCACCTGCATTCCAATCCCCATCTCCTCCTCCGCCGCCGCCGCCACC
JMSF016E15+ AGATCCGGAATCACCACCTGCATTCCAATCCCCATCTCCTCCTCCGCCGCCGCCGCCACC
JMFF050M08+ AGATCCGGAATCACCACCTGCATTCCAATCCCCATCTCCTCCTCCGCCGCCGCCGCCACC
JMSF032H21+ AGATCCGGAATCACCACCTGCATTCCAATCCCCATCTCCTCCTCCGCCGCCGCCGCCACC
JMFF017F20+ AGATCCGGAATCACCACCTGCATTCCAATCCCCATCTCCTCCTCCGCCGCCGCCGCCACC
JMSF017I02+ AGATCCGGAATCACCACCTGCATTCCAATCCCCATCTCCTCCTCCGCCGCCGCCGCCACC
JMFF048A24+ GCATTCCAATCCCCATCTCTTCCTCCGCCGCCGCCGCCACC
____________________________________________________________
consensus AGATCCGGAATCACCACCTGCATTCCAATCCCCATCTCCTCCTCCGCCGCCGCCGCCACC
. : . : . : . : . : . :
JMFS048H05+ TCGTCCCACGCCGCTCCCGCCGCCGCCGGCACAAAGGGAAGGCAACTTCAGAAGCGAATC
JMSF016E15+ TCGTCCCACGCCGCTCCCGCCGCCGCCGGCACAAAGGGAAGGCAACTTCAGAAGCGAATC
JMFF050M08+ TCGTCCCACGCCGCTCCCGCCGCCGCCGGCACAAAGGGAAGGCAACTTCAGAAGCGAATC
JMSF032H21+ TCGTCCCACGCCGCTCCCGCCGCCGCCGGCACAAAGGGAAGGCAACTTCAGAAGCGAATC
JMFF017F20+ TCGTCCCACGCCGCTCCCGCCGCCGCCGGCACAAAGGGAAGGCAACTTCAGAAGCGAATC
JMSF017I02+ TCGTCCCACGCCGCTCCCGCCGCCGCCGGCACAAAGGGAAGGCAACTTCAGAAGCGAATC
JMFF048A24+ TTGTCCCACGCCGCTCCCGCCGCCGCCGGCACAAAGGGAAGGCAACTTCAGAAGCGAATC
____________________________________________________________
consensus TCGTCCCACGCCGCTCCCGCCGCCGCCGGCACAAAGGGAAGGCAACTTCAGAAGCGAATC
. : . : . : . : . : . :
JMFS048H05+ CGACTCCCATTTCTTCGAAGAAATGGAAACCGTATAATCACCGGAAAACACTGAACCATG
JMSF016E15+ CGACTCCCATTTCTTCGAAGAAATGGAAACCGTATAATCACCGGAAAACACTGAACCATG
JMFF050M08+ CGACTCCCATTTCTTCGAAGAAATGGAAACCGTATAATCACCGGAAAACACTGAACCATG
JMSF032H21+ CGACTCCCATTTCTTCGAAGAAATGGAAACCGTATAATCACCGGAAAACACTGAACCATG
JMFF017F20+ CGACTCCCATTTCTTCGAAGAAATGGAAACCGTATAATCACCGGAAAACACTGAACCATG
JMSF017I02+ CGACTCCCATTTCTTCGAAGAAATGGAAACCGTATAATCACCGGAAAACACTGAACCATG
JMFF048A24+ CGACTCCCATTTCTTCGAAGAAATGGAAACCGTATAATCACCGGAAAACACTGAACCATG
____________________________________________________________
consensus CGACTCCCATTTCTTCGAAGAAATGGAAACCGTATAATCACCGGAAAACACTGAACCATG
. : . : . : . : . : . :
JMFS048H05+ ACCAGAAAAAAGATGCCGACTCGGAGGGCTCAAACGAGAGTTCTGCGTCCGATTCAAGCC
JMSF016E15+ ACCAGAAAAAAGATGCCGACTCGGAGGGCTCAAACGAGAGTTCTGCGTCCGATTCAAGCC
JMFF050M08+ ACCAGAAAAAAGATGCCGACTCGGAGGGCTCAAACGAGAGTTCTGCGTCCGATTCAAGCC
JMSF032H21+ ACCAGAAAAAAGATGCCGACTCGGAGGGCTCAAACGAGAGTTCTGCGTCCGATTCAAGCC
JMFF017F20+ ACCAGAAAAAAGATGCCGACTCGGAGGGCTCAAACGAGAGTTCTGCGTCCGATTCAAGCC
JMSF017I02+ ACCAGAAAAAAGATGCCGACTCGGAGGGCTCAAACGAGAGTTCTGCGTCCGATTCAAGCC
JMFF048A24+ ACCAGAAAAAAGATGCCGACTCGGAGGGCTCAAACGAGAGTTCTGCGTCCGATTCAAGCC
____________________________________________________________
consensus ACCAGAAAAAAGATGCCGACTCGGAGGGCTCAAACGAGAGTTCTGCGTCCGATTCAAGCC
. : . : . : . : . : . :
JMFS048H05+ AGCAGTAGTATAGAAATGAAGCTGCGACATCGCCGCCATCTTAACAACTCCGGCGATCCA
JMSF016E15+ AGCAGTAGTATAGAAATGAAGCTGCGACATCGCCGCCATCTTAACAACTCCGGCGATCCA
JMFF050M08+ AGCAGTAGTATAGAAATGAAGCTGCGACATCGCCGCCATCTTAACAACTCCGGCGATCCA
JMSF032H21+ AGCAGTAGTATAGAAATGAAGCTGCGACATCGCCGCCATCTTAACAACTCCGGCGATCCA
JMFF017F20+ AGCAGTAGTATAGAAATGAAGCTGCGACATCGCCGCCATCTTAACAACTCCGGCGATCCA
JMSF017I02+ AGCAGTAGTATAGAAATGAAGCTGCGACATCGCCGCCATCTTAACAACTCCGGCGATCCA
JMFF048A24+ AGCAGTAGTATAGAAATGAAGCTGCGACATCGCCGCCATCTTAACAACTCCGGCGATCCA
____________________________________________________________
consensus AGCAGTAGTATAGAAATGAAGCTGCGACATCGCCGCCATCTTAACAACTCCGGCGATCCA
. : . : . : . : . : . :
JMFS048H05+ ACACAACAAGCCGCGATCTTTCC
JMSF016E15+ ACACAACAAGCCGCGATCTTTCCTTCTCTAAA
JMFF050M08+ ACACAACAAGCCGCGATCTTTCCTTCTCTAAA
JMSF032H21+ ACACAACAAGCCGCGATCTTTCCTTCTCTAAA
JMFF017F20+ ACACAACAAGCCGCGATCTTTCCTTCTCTAAA
JMSF017I02+ ACACAACAAGCCGCGATCTTTCCTTCTCTAAAGATCTCTATCAGCTAC
JMFF048A24+ ACACAACAAGCCGCGATCTTTCCTTCTCTAAAGATCTCTATCAGCTACGCAAAATGGAGT
____________________________________________________________
consensus ACACAACAAGCCGCGATCTTTCCTTCTCTAAAGATCTCTATCAGCTACGCAAAATGGAGT