clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF026I06 | Sequence | 584 | 003524 (12) | ref|XP_004251213.1| | 165 | PREDICTED: uncharacterized protein LOC101258822 [Solanum lycopersicum] | 639 | 003524 (12) | ref|XP_004251213.1| | 165 | PREDICTED: uncharacterized protein LOC101258822 [Solanum lycopersicum] |
JMFN001H08 | Sequence | 544 | 003524 (12) | ref|XP_004251213.1| | 165 | PREDICTED: uncharacterized protein LOC101258822 [Solanum lycopersicum] | |||||
JMFN015C24 | Sequence | 320 | 003524 (12) | emb|CDP15577.1| | 9e-22 | unnamed protein product [Coffea canephora] | |||||
JMFN028M08 | Sequence | 616 | 003524 (12) | ref|XP_004251213.1| | 165 | PREDICTED: uncharacterized protein LOC101258822 [Solanum lycopersicum] | |||||
JMFN029N13 | Sequence | 475 | 003524 (12) | ref|XP_010274345.1| | 140 | PREDICTED: uncharacterized protein LOC104609675 [Nelumbo nucifera] | |||||
JMSF001M02 | Sequence | 391 | 003524 (12) | ref|XP_004251213.1| | 110 | PREDICTED: uncharacterized protein LOC101258822 [Solanum lycopersicum] | 599 | 003524 (12) | ref|XP_004251213.1| | 165 | PREDICTED: uncharacterized protein LOC101258822 [Solanum lycopersicum] |
JMSF003K03 | Sequence | 354 | 003524 (12) | ref|XP_004251213.1| | 85.1 | PREDICTED: uncharacterized protein LOC101258822 [Solanum lycopersicum] | 668 | 003524 (12) | ref|XP_004251213.1| | 162 | PREDICTED: uncharacterized protein LOC101258822 [Solanum lycopersicum] |
JMSF019G24 | Sequence | 265 | 003524 (12) | ref|XP_006361112.1| | 63.9 | PREDICTED: uncharacterized protein LOC102582349 [Solanum tuberosum] | 668 | 003524 (12) | ref|XP_004251213.1| | 162 | PREDICTED: uncharacterized protein LOC101258822 [Solanum lycopersicum] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig003524============================================ 668 1 ---------------------------------------------------->JMSF003K03 <---------------------------------------------------------------------------------------------------rJMSF003K03 16 --------------------------------------->JMSF019G24 <-------------------------------------------------------------------------------------------------rJMSF019G24 18 -------------------------------------------------------------------------------------->JMFF026I06 <---------------------------------------------------------------------------------------------rJMFF026I06 46 --------------------------------------------------------->JMSF001M02 <--------------------------------------------------------------------------------------rJMSF001M02
The following clones don't have the opposite end in this pair.
---------------------------------------------------------------------->JMFN029N13- -------------------------------------------------------------------------------->JMFN001H08- ----------------------------------------------->JMFN015C24- ------------------------------------------------------------------------------------------->JMFN028M08-