Contig 003524:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF026I06Sequence584003524 (12)ref|XP_004251213.1|165PREDICTED: uncharacterized protein LOC101258822 [Solanum lycopersicum]639003524 (12)ref|XP_004251213.1|165PREDICTED: uncharacterized protein LOC101258822 [Solanum lycopersicum]
JMFN001H08Sequence544003524 (12)ref|XP_004251213.1|165PREDICTED: uncharacterized protein LOC101258822 [Solanum lycopersicum]
JMFN015C24Sequence320003524 (12)emb|CDP15577.1|9e-22unnamed protein product [Coffea canephora]
JMFN028M08Sequence616003524 (12)ref|XP_004251213.1|165PREDICTED: uncharacterized protein LOC101258822 [Solanum lycopersicum]
JMFN029N13Sequence475003524 (12)ref|XP_010274345.1|140PREDICTED: uncharacterized protein LOC104609675 [Nelumbo nucifera]
JMSF001M02Sequence391003524 (12)ref|XP_004251213.1|110PREDICTED: uncharacterized protein LOC101258822 [Solanum lycopersicum]599003524 (12)ref|XP_004251213.1|165PREDICTED: uncharacterized protein LOC101258822 [Solanum lycopersicum]
JMSF003K03Sequence354003524 (12)ref|XP_004251213.1|85.1PREDICTED: uncharacterized protein LOC101258822 [Solanum lycopersicum]668003524 (12)ref|XP_004251213.1|162PREDICTED: uncharacterized protein LOC101258822 [Solanum lycopersicum]
JMSF019G24Sequence265003524 (12)ref|XP_006361112.1|63.9PREDICTED: uncharacterized protein LOC102582349 [Solanum tuberosum]668003524 (12)ref|XP_004251213.1|162PREDICTED: uncharacterized protein LOC101258822 [Solanum lycopersicum]

Alignment

This contig is upended


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rJMSF003K03-                                                              AAGACATT
                      ____________________________________________________________
consensus                                                                 AAGACATT
 
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rJMSF019G24-                  AACGAAATCCGAAATTCATGCCAATTCTGTGGCCACAGAATTTCTAAAACCA
JMFN028M08+                          TCCGAAATTCATGCCAATTCTGTGGCCACAGAATTTCTAAAACCA
rJMFF026I06-                  AACGAAATCCGAAATTCATGCCAATTCTGTGGCCACAGAATTTCTAAAACCA
rJMSF001M02-                  AACGAAATCCGAAATTCATGCCAATTCTGTGGCCACAGAATTTCTAAAACCA
rJMSF003K03-          AGCATTCCAACGAAATCCGAAATTCATGCCAATTCTGTGGCCACAGAATTTCTAAAACCA
                      ____________________________________________________________
consensus             AGCATTCCAACGAAATCCGAAATTCATGCCAATTCTGTGGCCACAGAATTTCTAAAACCA
 
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rJMSF019G24-          AACAACCTTTAGTGATTCTTATTATTGAGCATACAAAAGTGCGTTCCACTAGTAGTTGAC
JMFN028M08+           AACAACCTTTAGTGATTCTTATTATTGAGCATACAAAAGTGCGTTCCACTAGTAGTTGAC
JMFN001H08+                               ATTATTGAGCATACAAAAGTGCGTTCCACTAGTAGTTGAC
rJMFF026I06-          AACAACCTTTAGTGATTCTTATTATTGAGCATACAAAAGTGCGTTCCACTAGTAGTTGAC
rJMSF001M02-          AACAACCTTTAGTGATTCTTATTATTGAGCATACAAAAGTGCGTTCCACTAGTAGTTGAC
JMFF026I06+                          TTCTTATTATTGAGCATACAAAAGTGCGTTCCACTAGTAGTTGAC
rJMSF003K03-          AACAACCTTTAGTGATTCTTATTATTGAGCATACAAAAGTGCGTTCCACTAGTAGTTGAC
                      ____________________________________________________________
consensus             AACAACCTTTAGTGATTCTTATTATTGAGCATACAAAAGTGCGTTCCACTAGTAGTTGAC
 
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rJMSF019G24-          AGCAAACTGACTTCTTAAGACTTGTTTTGCCACCACTCCAAGAATTTAGCCTGTGCAGTC
JMFN028M08+           AGCAAACTGACTTCTTAAGACTTGTTTTGCCACCACTCCAAGAATTTAGCCTGTGCAGTC
JMFN001H08+           AGCAAACTGACTTCTTAAGACTTGTTTTGCCACCACTCCAAGAATTTAGCCTGTGCAGTC
rJMFF026I06-          AGCAAACTGACTTCTTAAGACTTGTTTTGCCACCACTCCAAGAATTTAGCCTGTGCAGTC
rJMSF001M02-          AGCAAACTGACTTCTTAAGACTTGTTTTGCCACCACTCCAAGAATTTAGCCTGTGCAGTC
JMFN029N13+                                                          AGCCTGTGCAGTC
JMFF026I06+           AGCAAACTGACTTCTTAAGACTTGTTTTGCCACCACTCCAAGAATTTAGCCTGTGCAGTC
rJMSF003K03-          AGCAAACTGACTTCTTAAGACTTGTTTTGCCACCACTCCAAGAATTTAGCCTGTGCAGTC
                      ____________________________________________________________
consensus             AGCAAACTGACTTCTTAAGACTTGTTTTGCCACCACTCCAAGAATTTAGCCTGTGCAGTC
 
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rJMSF019G24-          ACAGTGTTGTACCTGTAAAGCTGCAACGAATGGTTTCCAATTTCATGTCCAAATGTCCAA
JMFN028M08+           ACAGTGTTGTACCTGTAAAGCTGCAACGAATGGTTTCCAATTTCATGTCCAAATGTCCAA
JMFN001H08+           ACAGTGTTGTACCTGTAAAGCTGCAACGAATGGTTTCCAATTTCATGTCCAAATGTCCAA
rJMFF026I06-          ACAGTGTTGTACCTGTAAAGCTGCAACGAATGGTTTCCAATTTCATGTCCAAATGTCCAA
rJMSF001M02-          ACAGTGTTGTACCTGTAAAGCTGCAACGAATGGTTTCCAATTTCATGTCCAAATGTCCAA
JMFN029N13+           ACAGTGTTGTACCTGTAAAGCTGGTACGAATGGTTTCCAATTTCATGTCCAAATGTCCAA
JMFF026I06+           ACAGTGTTGTACCTGTAAAGCTGCAACGAATGGTTTCCAATTTCATGTCCAAATGTCCAA
rJMSF003K03-          ACAGTGTTGTACCTGTAAAGCTGCAACGAATGGTTTCCAATTTCATGTCCAAATGTCCAA
                      ____________________________________________________________
consensus             ACAGTGTTGTACCTGTAAAGCTGCAACGAATGGTTTCCAATTTCATGTCCAAATGTCCAA
 
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rJMSF019G24-          CCGCAGATGGCACCAAATCCGAGAGACAGTACAGTTCCATGTGGACTCTTAGAATACTTC
JMFN028M08+           CCGCAGATGGCACCAAATCCGAGAGACAGTACAGTTCCATGTGGACTCTTAGAATACTTC
JMFN015C24+                                                           TTAGAATACTTC
JMFN001H08+           CCGCAGATGGCACCAAATCCGAGAGACAGTACAGTTCCATGTGGACTCTTAGAATACTTC
JMSF001M02+            CGCAGATGGCACCAAATCCGAGAGACAGTACAGTTCCATGTGGACTCTTAGAATACTTC
rJMFF026I06-          CCGCAGATGGCACCAAATCCGAGAGACAGTACAGTTCCATGTGGACTCTTAGAATACTTC
rJMSF001M02-          CCGCAGATGGCACCAAATCCGAGAGACAGTACAGTTCCATGTGGACTCTTAGAATACTTC
JMFN029N13+           CCGCAGATGGCACCAAATCCTAGAGACAGTACAGTTCCATGTGGACTCTTAGAATACTTC
JMFF026I06+           CCGCAGATGGCACCAAATCCGAGAGACAGTACAGTTCCATGTGGACTCTTAGAATACTTC
rJMSF003K03-          CCGCAGATGGCACCAAATCCGAGAGACAGTACAGTTCCATGTGGACTCTTAGAATACTTC
                      ____________________________________________________________
consensus             CCGCAGATGGCACCAAATCCGAGAGACAGTACAGTTCCATGTGGACTCTTAGAATACTTC
 
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rJMSF019G24-          CAAGCCCAACCAGCAGTTGTAATACCTCCAACAATGCTTCCAACAACACCAAATTGTGCT
JMFN028M08+           CAAGCCCAACCAGCAGTTGTAATACCTCCAACAATGCTTCCAACAACACCAAATTGTGCT
JMFN015C24+           CAAGCCCAACCAGCAGTTGTAATACCTCCAACAATGCTTCCAACAACACCAAATTGTGCT
JMFN001H08+           CAAGCCCAACCAGCAGTTGTAATACCTCCAACAATGCTTCCAACAACACCAAATTGTGCT
JMSF001M02+           CAAGCCCAACCAGCAGTTGTAATACCTCCAACAATGCTTCCAACAACACCAAATTGTGCT
rJMFF026I06-          CAAGCCCAACCAGCAGTTGTAATACCTCCAACAATGCTTCCAACAACACCAAATTGTGCT
rJMSF001M02-          CAAGCCCAACCAGCAGTTGTAATACCTCCAACAATGCTTCCAACAACACCAAATTGTGCT
JMFN029N13+           CAAGCCCAACCAGCAGTTGTAATACCTCCAACAATGCTTCCAACAACACCAAATTGTGCT
JMFF026I06+           CAAGCCCAACCAGCAGTTGTAATACCTCCAACAATGCTTCCAACAACACCAAATTGTGCT
rJMSF003K03-          CAAGCCCAACCAGCAGTTGTAATACCTCCAACAATGCTTCCAACAACACCAAATTGTGCT
JMSF003K03+                 CAACCAGCAGTTGTAATACCTCCAACAATGCTTCCAACAACACCAAATTGTGCT
                      ____________________________________________________________
consensus             CAAGCCCAACCAGCAGTTGTAATACCTCCAACAATGCTTCCAACAACACCAAATTGTGCT
 
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rJMSF019G24-          ACTTCTCGTGCAGTCTTCAGCGCGGCGCCATGAACAGGATCGGAGGAAATGAACTCCTTG
JMFN028M08+           ACTTCTCGTGCAGTCTTCAGCGCGGGGCCATGAACAGGATCGGAGGAAATGAACTCCTTG
JMFN015C24+           ACTTCTCGTGCAGTCTTCAGCGCGGGGCCATGAACAGGATCGGAGGAAATGAACTCCTTG
JMFN001H08+           ACTTCTCGTGCAGTCTTCAGCGCGGGGCCATGAACAGGATCGGAGGAAATGAACTCCTTG
JMSF001M02+           ACTTCTCGTGCAGTCTTCAGCGCGGGGCCATGAACAGGATCGGAGGAAATGAACTCCTTG
rJMFF026I06-          ACTTCTCGTGCAGTCTTCAGCGCGGGGCCATGAACAGGATCGGAGGAAATGAACTCCTTG
rJMSF001M02-          ACTTCTCGTGCAGTCTTCAGCGCGGGGCCATGAACAGGATCGGAGGAAATGAACTCCTTG
JMFN029N13+           ACTTCTCGTGCAGTCTTCAGCGCGGGGCCATGAACAGGATCGGTGGAAATGGTCTCCTTG
JMFF026I06+           ACTTCTCGTGCAGTCTTCAGCGCGGGGCCATGAACAGGATCGGAGGAAATGAACTCCTTG
rJMSF003K03-          ACTTCTCGTGCAGTCTTCAGCGCGGCGCCATGAACAGGATCGGAGGAAATGAACTCCTTG
JMSF019G24+                                              AGGATCGGAGGAAATGAACTCCTTG
JMSF003K03+           ACTTCTCGTGCAGTCTTCAGCGCGGCGCCATGAACAGGATCGGAGGAAATGAACTCCTTG
                      ____________________________________________________________
consensus             ACTTCTCGTGCAGTCTTCAGCGCGGGGCCATGAACAGGATCGGAGGAAATGAACTCCTTG
 
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rJMSF019G24-          ACGTCGGCGTCGGTCCAGGAAGGAAGCGGCTTATCGCGCTTTAGGAACCTGTTGTAGCTG
JMFN028M08+           ACGTCGGCGTCGGTCCAGGAAGGAAGCGGCTTATCGCGCTTTAGGAACCTGTTGTAGCTG
JMFN015C24+           ACGTCGGCGTCGGTCCAGGAAGGAAGCGGCTTATCGCGCTTTAGGAACCTGTTGTAGCTG
JMFN001H08+           ACGTCGGCGTCGGTCCAGGAAGGAAGCGGCTTATCGCGCTTTAGGAACCTGTTGTAGCTG
JMSF001M02+           ACGTCGGCGTCGGTCCAGGAAGGAAGCGGCTTATCGCGCTTTAGGAACCTGTTGTAGCTG
rJMFF026I06-          ACGTCGGCGTCGGTCCAGGAAGGAAGCGGCTTATCGCGCTTTAGGAACCTGTTGTAGCTG
rJMSF001M02-          ACGTCGGCGTCGGTCCAGGAAGGAAGCGGCTTATCGCGCTTTAGGAACCTGTTGTAGCTG
JMFN029N13+           ACGTCGGCGTCGGTCCAGGAAGGAAGCGGCTTATCGCGCTTTAGGAACCTGTTGTAGCTG
JMFF026I06+           ACGTCGGCGTCGGTCCAGGAAGGAAGCGGCTTATCGCGCTTTAGGAACCTGTTGTAGCTG
rJMSF003K03-          ACGTCGGCGTCGGTCCAGGAAGGAAGCGGCTTATCGCGCTTTAGGAACCTGTTGTAGCTG
JMSF019G24+           ACGTCGGCGTCGGTCCAGGAAGGAAGCGGCTTATCGCGCTTTAGGAACCTGTTGTAGCTG
JMSF003K03+           ACGTCGGCGTCGGTCCAGGAAGGAAGCGGCTTATCGCGCTTTAGGAACCTGTTGTAGCTG
                      ____________________________________________________________
consensus             ACGTCGGCGTCGGTCCAGGAAGGAAGCGGCTTATCGCGCTTTAGGAACCTGTTGTAGCTG
 
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rJMSF019G24-          TCTAGGAAGGAAAACGGCTCCGCCATAGATCAATGATTGATTGAATGACTTATCGATCGA
JMFN028M08+           TCTAGGAAGGAAAACGGCTCCGCCATAGATCAATGATTGATTGAATGACTTATCGATCGA
JMFN015C24+           TCTAGGAAGGAAAACGGCTCCGCCATAGATCAATGATTGATTGAATGACTTATCGATCGA
JMFN001H08+           TCTAGGAAGGAAAACGGCTCCGCCATAGATCAATGATTGATTGAATGACTTATCGATCGA
JMSF001M02+           TCTAGGAAGGAAAACGGCTCCGCCATAGATCAATGATTGATTGAATGACTTATCGATCGA
rJMFF026I06-          TCTAGGAAGGAAAACGGCTCCGCCATAGATCAATGATTGATTGAATGACTTATCGATCGA
rJMSF001M02-          TCTAGGAAGGAAAACGGCTCCGCCATAGATCAATGATTGATTGAATGACTTATCGATCGA
JMFN029N13+           TCTAGGAAGGAAAACGGCTCCGCCATAGATCAATGATTGATTGAATGACTTATCGATCGA
JMFF026I06+           TCTAGGAAGGAAAACGGCTCCGCCATAGATCAATGATTGATTGAATGACTTATCGATCGA
rJMSF003K03-          TCTAGGAAGGAAAACGGCTCCGCCATAGATCAATGATTGATTGAATGACTTATCGATCGA
JMSF019G24+           TCTAGGAAGGAAAACGGCTCCGCCATAGATCAATGATTGATTGAATGACTTATCGATCGA
JMSF003K03+           TCTAGGAAGGAAAACGGCTCCGCCATAGATCAATGATTGATTGAATGACTTATCGATCGA
                      ____________________________________________________________
consensus             TCTAGGAAGGAAAACGGCTCCGCCATAGATCAATGATTGATTGAATGACTTATCGATCGA
 
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rJMSF019G24-          TCTGCTATGCTAATCTAACCTTCAATGATCGAGATGATGAAAGAGAGCTTAACTTCAGCT
JMFN028M08+           TCTGCTATGCTAATCTAACCTTCAATGATCGAGATGATGAAAGAGAGCTTAACTTCAGCT
JMFN015C24+           TCTGCTATGCTAATCTAACCTTCAATGATCGAGATGATGAAAGAGAGCTTAACTTCAGCT
JMFN001H08+           TCTGCTATGCTAATCTAACCTTCAATGATCGAGATGATGAAAGAGAGCTTAACTTCAGCT
JMSF001M02+           TCTGCTATGCTAATCTAACCTTCAATGATCGAGATGATGAAAGAGAGCTTAACTTCAGCT
rJMFF026I06-          TCTGCTATGCTAATCTAACCTTCAATGATCGAGATGATGAAAGAGAGCTTAACTTCAGCT
rJMSF001M02-          TCTGCTATGCTAATCTAACCTTCAATGATCGAGATGATGAAAGAGAGCTTA         
JMFN029N13+           TCTGCTATGCTAATCTAACCGTCAATGATCGAGATGATGAAAGAGAGCTTAAGTTCAGCT
JMFF026I06+           TCTGCTATGCTAATCTAACCTTCAATGATCGAGATGATGAAAGAGAGCTTAACTTCAGCT
rJMSF003K03-          TCTGCTATGCTAATCTAACCTTCAATGATCGAGATGATGAAAGAGAGCTTAACTTCAGCT
JMSF019G24+           TCTGCTATGCTAATCTAACCTTCAATGATCGAGATGATGAAAGAGAGCTTAACTTCAGCT
JMSF003K03+           TCTGCTATGCTAATCTAACCTTCAATGATCGAGATGATGAAAGAGAGCTTAACTTCAGCT
                      ____________________________________________________________
consensus             TCTGCTATGCTAATCTAACCTTCAATGATCGAGATGATGAAAGAGAGCTTAACTTCAGCT
 
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rJMSF019G24-          ACGATTGTGTCTACGTCGCTCCTGGAGTTCTGGATTTGAGGCTAGGTTGAGCTAAAACGC
JMFN028M08+           ACGATTGTGTCTACGTCGCTCCTGGAGTTCT                             
JMFN015C24+           ACGATTGT                                                    
JMFN001H08+           ACGATTGTGTCTACGTCGCTCCTG                                    
JMSF001M02+           ACGATTGTGTCTACGTCGCTCCTGGAGTTC                              
rJMFF026I06-          ACGATTGTGTCTACGTCGCTCCTGGAGTTCTGGATT                        
JMFN029N13+           ACGATTGTGTCTACGTCGCTCCTGGAGTTCTGGATTTGAG                    
JMFF026I06+           ACGATTGTGTCTACGTCGCTCCTGGAGTTCTGGATTTGAGGCTAGGTTGAGCTAAAAC  
rJMSF003K03-          ACGATTGTGTCTACGTCGCTCCTGGAGTTCTGGATTTGAGGCTAGGTTGAGCTAAAACGC
JMSF019G24+           ACGATTGTGTCTACGTCGCTCCTGGAGTTCTGGATTTGAGGCTAGGTTGAGCTAAAACGC
JMSF003K03+           ACGATTGTGTCTACGTCGCTCCTGGAGTTCTGGATTTGAGGCTAGGTTGAGCTAAAACGC
                      ____________________________________________________________
consensus             ACGATTGTGTCTACGTCGCTCCTGGAGTTCTGGATTTGAGGCTAGGTTGAGCTAAAACGC