clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF004D13 | Sequence | 512 | 000221 (20) | ref|XP_009616644.1| | 202 | PREDICTED: uncharacterized protein LOC104109132 [Nicotiana tomentosiformis] | 631 | 000221 (20) | ref|XP_009616644.1| | 194 | PREDICTED: uncharacterized protein LOC104109132 [Nicotiana tomentosiformis] |
JMFF009A20 | Sequence | 537 | 000221 (20) | ref|XP_009616644.1| | 201 | PREDICTED: uncharacterized protein LOC104109132 [Nicotiana tomentosiformis] | 611 | 000221 (20) | ref|XP_009616644.1| | 194 | PREDICTED: uncharacterized protein LOC104109132 [Nicotiana tomentosiformis] |
JMFF010A12 | Sequence | 550 | 000221 (20) | ref|XP_009616644.1| | 191 | PREDICTED: uncharacterized protein LOC104109132 [Nicotiana tomentosiformis] | 682 | 000221 (20) | ref|XP_009616644.1| | 192 | PREDICTED: uncharacterized protein LOC104109132 [Nicotiana tomentosiformis] |
JMFF024H13 | Sequence | 447 | 000221 (20) | ref|XP_009616644.1| | 174 | PREDICTED: uncharacterized protein LOC104109132 [Nicotiana tomentosiformis] | 632 | 000221 (20) | ref|XP_009616644.1| | 194 | PREDICTED: uncharacterized protein LOC104109132 [Nicotiana tomentosiformis] |
JMFF039H10 | Sequence | 599 | 000221 (20) | ref|XP_009616644.1| | 193 | PREDICTED: uncharacterized protein LOC104109132 [Nicotiana tomentosiformis] | 649 | 000221 (20) | ref|XP_009616644.1| | 193 | PREDICTED: uncharacterized protein LOC104109132 [Nicotiana tomentosiformis] |
JMFF048H05 | Sequence | 364 | 000221 (20) | ref|XP_009616644.1| | 137 | PREDICTED: uncharacterized protein LOC104109132 [Nicotiana tomentosiformis] | 284 | 000221 (20) | |||
JMFN008D11 | Sequence | 627 | 000221 (20) | ref|XP_009616644.1| | 191 | PREDICTED: uncharacterized protein LOC104109132 [Nicotiana tomentosiformis] | |||||
JMFN008O21 | Sequence | 613 | 000221 (20) | ref|XP_009616644.1| | 199 | PREDICTED: uncharacterized protein LOC104109132 [Nicotiana tomentosiformis] | |||||
JMFN013G10 | Sequence | 618 | 000221 (20) | ref|XP_009616644.1| | 193 | PREDICTED: uncharacterized protein LOC104109132 [Nicotiana tomentosiformis] | |||||
JMFN029D23 | Sequence | 534 | 000221 (20) | ref|XP_009616644.1| | 194 | PREDICTED: uncharacterized protein LOC104109132 [Nicotiana tomentosiformis] | |||||
JMFN031K12 | Sequence | 573 | 000221 (20) | ref|XP_009616644.1| | 198 | PREDICTED: uncharacterized protein LOC104109132 [Nicotiana tomentosiformis] | |||||
JMFN037O03 | Sequence | 591 | 000221 (20) | ref|XP_009616644.1| | 193 | PREDICTED: uncharacterized protein LOC104109132 [Nicotiana tomentosiformis] | |||||
JMSF021I11 | Sequence | 646 | 000221 (20) | ref|XP_009616644.1| | 194 | PREDICTED: uncharacterized protein LOC104109132 [Nicotiana tomentosiformis] | 594 | 000221 (20) | ref|XP_009616644.1| | 194 | PREDICTED: uncharacterized protein LOC104109132 [Nicotiana tomentosiformis] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig000221============================================ 734 4 ------------------------------------------------->JMFF048H05 <--------------------------------------rJMFF048H05 45 -------------------------------------------------------------------------->JMFF010A12 <--------------------------------------------------------------------------------------------rJMFF010A12 85 --------------------------------------------------------------------------------->JMFF039H10 <---------------------------------------------------------------------------------------rJMFF039H10 102 ------------------------------------------------------------>JMFF024H13 <-------------------------------------------------------------------------------------rJMFF024H13 103 --------------------------------------------------------------------->JMFF004D13 <-------------------------------------------------------------------------------------rJMFF004D13 123 ------------------------------------------------------------------------>JMFF009A20 <----------------------------------------------------------------------------------rJMFF009A20 141 -------------------------------------------------------------------------------------->JMSF021I11 <--------------------------------------------------------------------------------rJMSF021I11
The following clones don't have the opposite end in this pair.
----------------------------------------------------------------------------------->JMFN013G10- ------------------------------------------------------------------------>JMFN029D23- ----------------------------------------------------------------------------------->JMFN008O21- ----------------------------------------------------------------------------->JMFN031K12- -------------------------------------------------------------------------------->JMFN037O03- ------------------------------------------------------------------------------------>JMFN008D11-