| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004D13 | Sequence | 512 | 000221 (20) | ref|XP_009616644.1| | 202 | PREDICTED: uncharacterized protein LOC104109132 [Nicotiana tomentosiformis] | 631 | 000221 (20) | ref|XP_009616644.1| | 194 | PREDICTED: uncharacterized protein LOC104109132 [Nicotiana tomentosiformis] |
| JMFF009A20 | Sequence | 537 | 000221 (20) | ref|XP_009616644.1| | 201 | PREDICTED: uncharacterized protein LOC104109132 [Nicotiana tomentosiformis] | 611 | 000221 (20) | ref|XP_009616644.1| | 194 | PREDICTED: uncharacterized protein LOC104109132 [Nicotiana tomentosiformis] |
| JMFF010A12 | Sequence | 550 | 000221 (20) | ref|XP_009616644.1| | 191 | PREDICTED: uncharacterized protein LOC104109132 [Nicotiana tomentosiformis] | 682 | 000221 (20) | ref|XP_009616644.1| | 192 | PREDICTED: uncharacterized protein LOC104109132 [Nicotiana tomentosiformis] |
| JMFF024H13 | Sequence | 447 | 000221 (20) | ref|XP_009616644.1| | 174 | PREDICTED: uncharacterized protein LOC104109132 [Nicotiana tomentosiformis] | 632 | 000221 (20) | ref|XP_009616644.1| | 194 | PREDICTED: uncharacterized protein LOC104109132 [Nicotiana tomentosiformis] |
| JMFF039H10 | Sequence | 599 | 000221 (20) | ref|XP_009616644.1| | 193 | PREDICTED: uncharacterized protein LOC104109132 [Nicotiana tomentosiformis] | 649 | 000221 (20) | ref|XP_009616644.1| | 193 | PREDICTED: uncharacterized protein LOC104109132 [Nicotiana tomentosiformis] |
| JMFF048H05 | Sequence | 364 | 000221 (20) | ref|XP_009616644.1| | 137 | PREDICTED: uncharacterized protein LOC104109132 [Nicotiana tomentosiformis] | 284 | 000221 (20) | |||
| JMFN008D11 | Sequence | 627 | 000221 (20) | ref|XP_009616644.1| | 191 | PREDICTED: uncharacterized protein LOC104109132 [Nicotiana tomentosiformis] | |||||
| JMFN008O21 | Sequence | 613 | 000221 (20) | ref|XP_009616644.1| | 199 | PREDICTED: uncharacterized protein LOC104109132 [Nicotiana tomentosiformis] | |||||
| JMFN013G10 | Sequence | 618 | 000221 (20) | ref|XP_009616644.1| | 193 | PREDICTED: uncharacterized protein LOC104109132 [Nicotiana tomentosiformis] | |||||
| JMFN029D23 | Sequence | 534 | 000221 (20) | ref|XP_009616644.1| | 194 | PREDICTED: uncharacterized protein LOC104109132 [Nicotiana tomentosiformis] | |||||
| JMFN031K12 | Sequence | 573 | 000221 (20) | ref|XP_009616644.1| | 198 | PREDICTED: uncharacterized protein LOC104109132 [Nicotiana tomentosiformis] | |||||
| JMFN037O03 | Sequence | 591 | 000221 (20) | ref|XP_009616644.1| | 193 | PREDICTED: uncharacterized protein LOC104109132 [Nicotiana tomentosiformis] | |||||
| JMSF021I11 | Sequence | 646 | 000221 (20) | ref|XP_009616644.1| | 194 | PREDICTED: uncharacterized protein LOC104109132 [Nicotiana tomentosiformis] | 594 | 000221 (20) | ref|XP_009616644.1| | 194 | PREDICTED: uncharacterized protein LOC104109132 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMFF048H05- CTTTTTTTTTTTTT
____________________________________________________________
consensus CTTTTTTTTTTTTT
. : . : . : . : . : . :
rJMFF048H05- TGAAAAAAAGGGGAGAAAAAATATATAAAGAAGAAGAAGAAAAAAGCATATATAGATGCC
rJMFF010A12- AGAAAAAGAAGAAAAAAGCATATATAGATGCC
____________________________________________________________
consensus TGAAAAAAAGGGGAGAAAAAATATATAAAGAAGAAGAAGAAAAAAGCATATATAGATGCC
. : . : . : . : . : . :
rJMFF048H05- ACACGACAAATTGATATAAAATTTAATAATACTTCGAAAAATACAGAAAATATTACGATA
JMSF021I11+ TTGATATAAAATTTAATAATACTTCGAAAAATACAGAAAATATTACGATA
rJMSF021I11- ACGATA
rJMFF010A12- ACACGACAAATTGATATAAAATTTAATAATACTTCGAAAAATACAGAAAATATTACGATA
rJMFF024H13- ATAATACTTCGAAAAATACAGAAAATATTACGATA
rJMFF009A20- AAAATATTACGACA
JMFN037O03+ AGAAAATATTNCGATA
JMFN031K12+ CGAAAAATACAGAAAATATTACGATA
rJMFF004D13- TAATACTTCGAAAAATACAGAAAATATTACGATA
JMFN008D11+ TGATATAAAATTTAATAATACTTCGAAAAATACAGAAAATATTACGATA
JMFN008O21+ TTTAATAATACTTCGAAAAATACAGAAAATATTNCGATA
JMFN013G10+ AAATTTAATAATACTTCGAAAAATACAGAAAATATTACGATA
rJMFF039H10- TGATATAAAATTTAATAATACTTCGAAAAATACAGAAAATATTACGATA
____________________________________________________________
consensus ACACGACAAATTGATATAAAATTTAATAATACTTCGAAAAATACAGAAAATATTACGATA
. : . : . : . : . : . :
rJMFF048H05- TTACAATAAAAAGAAAACGTATTATTCTTTTAACTTATTGGTTTCTGTAAACATCCCGGC
JMSF021I11+ TTACAATAAAAAGAAAACGTATTATTCTTTTAACTTATTGGTTTCTGTAAACATCCCGGC
rJMSF021I11- TTACAATAAAAAGAAAACGTATTATTCTTTTAACTTATTGGTTTCTGTAAACATCCCGGC
rJMFF010A12- TTACAATAAAAAGAAAACGTATTATTCTTTTAACTTATTGGTTTCTGTAAACATCCCGGC
rJMFF024H13- TTACAATAAAAAGAAAACGTATTATTCTTTTAACTTATTGGTTTCTGTAAACATCCCGGC
rJMFF009A20- TTACAATAAAAAGAAAACGTATTATTCTTTTAACTTATTGGTTTCTGTAAACATCCCGGC
JMFN037O03+ TTACAATAAAAAGAAAACGTATTATTCTTTTAACTTATTGGTTTCTGTAAACATCCCGGC
JMFN031K12+ TTACAATAAAAAGAAAACGTATTATTCTTTTAACTTATTGGTTTCTGTAAACATCCCGGC
rJMFF004D13- TTACAATAAAAAGAAAACGTATTATTCTTTTAACTTATTGGTTTCTGTAAACATCCCGGC
JMFN008D11+ TTACAATAAAAAGAAAACGTATTATTCTTTTAACTTATTGGTTTCTGTAAACATCCCGGC
JMFN008O21+ TTACAATAAAAAGAAAACGTATTATTCTTTTAACTTATTGGTTTCTGTAAACATCCCGGC
JMFN013G10+ TTACAATAAAAAGAAAACGTATTATTCTTTTAACTTATTGGTTTCTGTAAACATCCCGGC
rJMFF039H10- TTACAATAAAAAGAAAACGTATTATTCTTTTAACTTATTGGTTTCTGTAAACATCCCGGC
JMFF010A12+ TAAACATCCCGGC
JMFN029D23+ CAATAAAAAGAAAACGTATTATTCTTTTAACTTATTGGTTTCTGTAAACATCCCGGC
JMFF039H10+ TACAATAAAAAGAAAACGTATTATTCTTTTAACTTATTGGTTTCTGTAAACATCCCGGC
____________________________________________________________
consensus TTACAATAAAAAGAAAACGTATTATTCTTTTAACTTATTGGTTTCTGTAAACATCCCGGC
. : . : . : . : . : . :
rJMFF048H05- GAAAGCGTTCATTTCTTCTGGTCGCCGTCGGCAGCGGCGGCGTCCTCTTCAAAGGCGGAA
JMSF021I11+ GAAAGCGTTCGTTTCTTCTGGTCGCCGTCGGCAGCGGCGGCGTCCTCTTCAAAGGCGGAA
rJMSF021I11- GAAAGCGTTCGTTTCTTCTGGTCGCCGTCGGCAGCGGCGGCGTCCTCTTCAAAGGCGGAA
rJMFF010A12- GAAAGCGTTCATTTCTTCTGGTCGCCGTCGGCAGCGGCGGCGTCCTCTTCAAAGGCGGAA
rJMFF024H13- GAAAGCGTTCATTTCTTCTGGTCGCCGTCGGCAGCGGCGGCGTCCTCTTCAAAGGCGGAA
rJMFF009A20- GAAAGCGTTCATTTCTTCTGGTCGCCGTCGGCAGCGGCGGCGTCCTCTTCAAAGGCGGAA
JMFN037O03+ GAAAGCGTTCATTTCTTCTGGTCGCCGTCGGCAGCGGCGGCGTCCTCTTCAAAGGCGGAA
JMFN031K12+ GAAAGCGTTCATTTCTTCTGGTCGCCGTCGGCAGCGGCGGCGTCCTCTTCAAAGGCGGAA
rJMFF004D13- GAAAGCGTTCATTTCTTCTGGTCGCCGTCGGCAGCGGCGGCGTCCTCTTCAAAGGCGGAA
JMFN008D11+ GAAAGCGTTCATTTCTTCTGGTCGCCGTCGGCAGCGGCGGCGTCCTCTTCAAAGGCGGAA
JMFN008O21+ GAAAGCGTTCATTTCTTCTGGTCGCCGTCGGCAGCGGCGGCGTCCTCTTTAAAGGCGGAA
JMFN013G10+ GAAAGCGTTCATTTCTTCTGGTCGCCGTCGGCAGCGGCGGCGTCCTCTTCAAAGGCGGAA
JMFF009A20+ GAAAGCGTTCATTTCTTNTGGTCGCCGTCGGCAGCGGCGGCGTCCTCTTCAAAGGCGGAA
rJMFF039H10- GAAAGCGTTCATTTCTTCTGGTCGCCGTCGGCAGCGGCGGCGTCCTCTTCAAAGGCGGAA
JMFF010A12+ GAAAGCGTTCATTTCTTCTGGTCGCCGTCGGCAGCGGCGGCGTCCTCTTCAAAGGCGGAA
JMFN029D23+ GAAAGCGTTCATTTCTTCTGGTCGCCGTCGGCAGCGGCGGCGTCCTCTTCAAAGGCGGAA
JMFF004D13+ CGTCGGCAGCGGCGGCGTCCTCTTCAAAGGCGGAA
JMFF039H10+ GAAAGCGTTCATTTCTTCTGGTCGCCGTCGGCAGCGGCGGCGTCCTCTTCAAAGGCGGAA
____________________________________________________________
consensus GAAAGCGTTCATTTCTTCTGGTCGCCGTCGGCAGCGGCGGCGTCCTCTTCAAAGGCGGAA
. : . : . : . : . : . :
rJMFF048H05- ACGGGGTAGGAGCGGGGGAGGCCAGCCGGA
JMSF021I11+ ACGGGGTAGGAGCGGGAGAGGCCAGCCGGAGTTGAGAAGTTGATTTTCCCTGCGTCAGGA
rJMSF021I11- ACGGGGTAGGAGCGGGAGAGGCCAGCCGGAGTTGAGAAGTTGATTTTCCCTGCGTCAGGA
rJMFF010A12- ACGGGGTAGGAGCGGGGGAGGCCAGCCGGAGTTGAGAAGTTGATTTTCCCTGCGTCAGGA
rJMFF024H13- ACGGGGTAGGAGCGGGAGAGGCCAGCCGGAGTTGAGAAGTTGATTTTCCCTGCGTCAGGA
rJMFF009A20- ACGGGGTAGGAGCGGGAGAGGCCAGCCGGAGTTGAGAAGTTGATTTTCCCTGCGTCAGGA
JMFN037O03+ ACGGGGTAGGAGCGGGAGAGGCCAGCCGGAGTTGAGAAGTTGATTTTCCCTGCGTCAGGA
JMFN031K12+ ACGGGGTAGGAGCGGGAGAGGCCAGCCGGAGTTGAGAAGTTGATTTTCCCTGCGTCAGGA
rJMFF004D13- ACGGGGTAGGAGCGGGAGAGGCCAGCCGGAGTTGAGAAGTTGATTTTCCCTGCGTCAGGA
JMFN008D11+ ACGGGGTAGGAGCGGGAGAGGCCAGCCGGAGTTGAGAAGTTGATTTTCCCTGCGTCAGGA
JMFN008O21+ ACGGGGTAGGAGCGGGAGAGGCCAGCCGGAGTTGAGAAGTTGATTTTCCCTGCGTCAGGA
JMFN013G10+ ACGGGGTAGGAGCGGGAGAGGCCAGCCGGAGTTGAGAAGTTGATTTTCCCTGCGTCAGGA
JMFF009A20+ ACGGGGTAGGAGCGGGAGAGGCCAGCCGGAGTTGAGAAGTTGATTTTCCCTGCGTCAGGA
JMFF024H13+ GTTGAGAAGTTGATTTTCCCTGCGTCAGGA
rJMFF039H10- ACGGGGTAGGAGCGGGAGAGGCCAGCCGGAGTTGAGAAGTTGATTTTCCCTGCGTCAGGA
JMFF010A12+ ACGGGGTAGGAGCGGGGGAGGCCAGCCGGAGTTGAGAAGTTGATTTTCCCTGCGTCAGGA
JMFN029D23+ ACGGGGTAGGAGCGGGAGAGGCCAGCCGGAGTTGAGAAGTTGATTTTCCCTGCGTCAGGA
JMFF004D13+ ACGGGGTAGGAGCGGGAGAGGCCAGCCGGAGTTGAGAAGTTGATTTTCCCTGCGTCAGGA
JMFF039H10+ ACGGGGTAGGAGCGGGAGAGGCCAGCCGGAGTTGAGAAGTTGATTTTCCCTGCGTCAGGA
____________________________________________________________
consensus ACGGGGTAGGAGCGGGAGAGGCCAGCCGGAGTTGAGAAGTTGATTTTCCCTGCGTCAGGA
. : . : . : . : . : . :
JMSF021I11+ TCGGGGATCGAAATATGAGTAAGCGTAACCCAGAGTAACAGCTCCTTACTCTTGACGCCG
rJMSF021I11- TCGGGGATCGAAATATGAGTAAGCGTAACCCAGAGTAACAGCTCCTTACTCTTGACGCCG
rJMFF010A12- TCGGGGATCGAAATATGAGTAAGCGTAACCCAGAGTAACAGCTCCTTACTCTTGACGCCG
rJMFF024H13- TCGGGGATCGAAATATGAGTAAGCGTAACCCAGAGTAACAGCTCCTTACTCTTGACGCCG
rJMFF009A20- TCGGGGATCGAAATATGAGTAAGCGTAACCCAGAGTAACAGCTCCTTACTCTTGACGCCG
JMFN037O03+ TCGGGGATCGAAATATGAGTAAGCGTAACCCAGAGTAACAGCTCCTTACTCTTGACGCCG
JMFN031K12+ TCGGGGATCGAAATATGAGTAAGCGTAACCCAGAGTAACAGCTCCTTACTCTTGACGCCG
rJMFF004D13- TCGGGGATCGAAATATGAGTAAGCGTAACCCAGAGTAACAGCTCCTTACTCTTGACGCCG
JMFN008D11+ TCGGGGATCGAAATATGAGTAAGCGTAACCCAGAGTAACAGCTCCTTACTCTTGACGCCG
JMFN008O21+ TCGGGGATCGAAATATGAGTAAGCGTAACCCAGAGTAACAGCTCCTTACTCTTGACGCCG
JMFN013G10+ TCGGGGATCGAAATATGAGTAAGCGTAACCCAGAGTAACAGCTCCTTACTCTTGACGCCG
JMFF009A20+ TCGGGGATCGAAATATGAGTAAGCGTAACCCAGAGTAACAGCTCCTTACTCTTGACGCCG
JMFF048H05+ GACGCCG
JMFF024H13+ TCGGGGATCGAAATATGAGTAAGCGTAACCCAGAGTAACAGCTCCTTACTCTTGACGCCG
rJMFF039H10- TCGGGGATCGAAATATGAGTAAGCGTAACCCAGAGTAACAGCTCCTTACTCTTGACGCCG
JMFF010A12+ TCGGGGATCGAAATATGAGTAAGCGTAACCCAGAGTAACAGCTCCTTACTCTTGACGCCG
JMFN029D23+ TCGGGGATCGAAATATGAGTAAGCGTAACCCAGAGTAACAGCTCCTTACTCTTGACGCCG
JMFF004D13+ TCGGGGATCGAAATATGAGTAAGCGTAACCCAGAGTAACAGCTCCTTACTCTTGACGCCG
JMFF039H10+ TCGGGGATCGAAATATGAGTAAGCGTAACCCAGAGTAACAGCTCCTTACTCTTGACGCCG
____________________________________________________________
consensus TCGGGGATCGAAATATGAGTAAGCGTAACCCAGAGTAACAGCTCCTTACTCTTGACGCCG
. : . : . : . : . : . :
JMSF021I11+ GTGAGGTGCTTCAGGCGGCGGTCCTCCACGAAGGCGGTGACCTCGGTATCATACCACACA
rJMSF021I11- GTGAGGTGCTTCAGGCGGCGGTCCTCCACGAAGGCGGTGACCTCGGTATCATACCACACA
rJMFF010A12- GTGAGGTGCTTCAGGCGGCGGTCCTCCACGAAGGCGGTGACCTCGGTATCATACCACACA
rJMFF024H13- GTGAGGTGCTTCAGGCGGCGGTCCTCCACGAAGGCGGTGACCTCGGTATCATACCACACA
rJMFF009A20- GTGAGGTGCTTCAGGCGGCGGTCCTCCACGAAGGCGGTGACCTCGGTATCATACCACACA
JMFN037O03+ GTGAGGTGCTTCAGGCGGCGGTCCTCCACGAAGGCGGTGACCTCGGTATCATACCACACA
JMFN031K12+ GTGAGGTGCTTCAGGCGGCGGTCCTCCACGAAGGCGGTGACCTCGGTATCATACCACACA
rJMFF004D13- GTGAGGTGCTTCAGGCGGCGGTCCTCCACGAAGGCGGTGACCTCGGTATCATACCACACA
JMFN008D11+ GTGAGGTGCTTCAGGCGGAGGTCCTCCACGAAGGCGGTGACCTCGGTATCATACCACACA
JMFN008O21+ GTGAGGTGCTTCAGGCGGCGGTCCTCCACGAAGGCGGTGACCTCGGTATCATACCACACA
JMFN013G10+ GTGAGGTGCTTCAGGCGGCGGTCCTCCACGAAGGCGGTGACCTCGGTATCATACCACACA
JMFF009A20+ GTGAGGTGCTTCAGGCGGCGGTCCTCCACGAAGGCGGTGACCTCGGTATCATACCACACA
JMFF048H05+ GTGAGGTGCTTCAGGCGGCGGTCCTCCACGAAGGCGGTGACCTCGGTATCATACCACACA
JMFF024H13+ GTGAGGTGCTTCAGGCGGCGGTCCTCCACGAAGGCGGTGACCTCGGTATCATACCACACA
rJMFF039H10- GTGAGGTGCTTCAGGCGGCGGTCCTCCACGAAGGCGGTGACCTCGGTATCATACCACACA
JMFF010A12+ GTGAGGTGCTTCAGGCGGCGGTCCTCCACGAAGGCGGTGACCTCGGTATCATACCACACA
JMFN029D23+ GTGAGGTGCTTCAGGCGGCGGTCCTCCACGAAGGCGGTGACCTCGGTATCATACCACACA
JMFF004D13+ GTGAGGTGCTTCAGGCGGCGGTCCTCCACGAAGGCGGTGACCTCGGTATCATACCACACA
JMFF039H10+ GTGAGGTGCTTCAGGCGGCGGTCCTCCACGAAGGCGGTGACCTCGGTATCATACCACACA
____________________________________________________________
consensus GTGAGGTGCTTCAGGCGGCGGTCCTCCACGAAGGCGGTGACCTCGGTATCATACCACACA
. : . : . : . : . : . :
JMSF021I11+ AGCTTTCCGATCTTCTTGAACTTGTGCTCCTTCGCCTTCTTCTGCTTCATCCACACGAAC
rJMSF021I11- AGCTTTCCGATCTTCTTGAACTTGTGCTCCTTCGCCTTCTTCTGCTTCATCCACACGAAC
rJMFF010A12- AGCTTTCCGATCTTCTTGAACTTGTGCTCCTTCGCCTTCTTCTGCTTCATCCACACGAAC
rJMFF024H13- AGCTTTCCGATCTTCTTGAACTTGTGCTCCTTCGCCTTCTTCTGCTTCATCCACACGAAC
rJMFF009A20- AGCTTTCCGATCTTCTTGAACTTGTGCTCCTTCGCCTTCTTCTGCTTCATCCACACGAAC
JMFN037O03+ AGCTTTCCGATCTTCTTGAACTTGTGCTCCTTCGCCTTCTTCTGCTTCATCCACACGAAC
JMFN031K12+ AGCTTTCCGATCTTCTTGAACTTGTGCTCCTTCGCCTTCTTCTGCTTCATCCACACGAAC
rJMFF004D13- AGCTTTCCGATCTTCTTGAACTTGTGCTCCTTCGCCTTCTTCTGCTTCATCCACACGAAC
JMFN008D11+ AGCTTTCCGATCTTCTTGAACTTGTGCTCCTTCGCCTTCTTCTGCTTCATCCACACGAAC
JMFN008O21+ AGCTTTCCGATCTTCTTGAACTTGTGCTCCTTCGCCTTCTTCTGCTTCATCCACACGAAC
JMFN013G10+ AGCTTTCCGATCTTCTTGAACTTGTGCTCCTTCGCCTTCTTCTGCTTCATCCACACGAAC
JMFF009A20+ AGCTTTCCGATCTTCTTGAACTTGTGCTCCTTCGCCTTCTTCTGCTTCATCCACACGAAC
JMFF048H05+ AGCTTTCCGATCTTCTTGAACTTGTGCTCCTTCGCCTTCTTCTGCTTCATCCACACGAAC
JMFF024H13+ AGCTTTCCGATCTTCTTGAACTTGTGCTCCTTCGCCTTCTTCTGCTTCATCCACACGAAC
rJMFF039H10- AGCTTTCCGATCTTCTTGAACTTGTGCTCCTTCGCCTTCTTCTGCTTCATCCACACGAAC
JMFF010A12+ AGCTTTCCGATCTTCTTGAACTTGTGCTCCTTCGCCTTCTTCTGCTTCATCCACACGAAC
JMFN029D23+ AGCTTTCCGATCTTCTTGAACTTGTGCTCCTTCGCCTTCTTCTGCTTCATCCACACGAAC
JMFF004D13+ AGCTTTCCGATCTTCTTGAACTTGTGCTCCTTCGCCTTCTTCTGCTTCATCCACACGAAC
JMFF039H10+ AGCTTTCCGATCTTCTTGAACTTGTGCTCCTTCGCCTTCTTCTGCTTCATCCACACGAAC
____________________________________________________________
consensus AGCTTTCCGATCTTCTTGAACTTGTGCTCCTTCGCCTTCTTCTGCTTCATCCACACGAAC
. : . : . : . : . : . :
JMSF021I11+ CCGGTCTCGCGGTTCCGCCCCACCTCTACGTACTCGTCCAGCGGCAGCAGCCCTCTCGGC
rJMSF021I11- CCGGTCTCGCGGTTCCGCCCCACCTCTACGTACTCGTCCAGCGGCAGCAGCCCTCTCGGC
rJMFF010A12- CCGGTCTCGCGGTTCCGCCCCACCTCTACGTACTCGTCCAGCGGCAGCAGCCCTCTCGGC
rJMFF024H13- CCGGTCTCGCGGTTCCGCCCCACCTCTACGTACTCGTCCAGCGGCAGCAGCCCTCTCGGC
rJMFF009A20- CCGGTCTCGCGGTTCCGCCCCACTTCTACGTACTCGTCCAGCGGCAGCAGCCCTCTCGGC
JMFN037O03+ CCGGTCTCGCGGTTCCGCCCCACCTCTACGTACTCGTCCAGCGGCAGCAGCCCTCTCGGC
JMFN031K12+ CCGGTCTCGCGGTTCCGCCCCACCTCTACGTACTCGTCCAGCGGCAGCAGCCCTCTCGGC
rJMFF004D13- CCGGTCTCGCGGTTCCGCCCCACCTCTACGTACTCGTCCAGCGGCAGCAGCCCTCTCGGC
JMFN008D11+ CCGGTCTCGCGGTTCCGCCCCACCTCTACGTACTCGTCCAGCGGCAGCAGCCCTCTCGGC
JMFN008O21+ CCGGTCTCGCGGTTCCGCCCCACCTCTACGTACTCGTCCAGCGGCAGCAGCCCTCTCGGC
JMFN013G10+ CCGGTCTCGCGGTTCCGCCCCACCTCTACGTACTCGTCCAGCGGCAGCAGCCCTCTCGGC
JMFF009A20+ CCGGTCTCGCGGTTCCGCCCCACTTCTACGTACTCGTCCAGCGGCAGCAGCCCTCTCGGC
JMFF048H05+ CCGGTCTCGCGGTTCCGCCCCACCTCTACGTACTCGTCCAGCGGCAGCAGCCCTCTCGGC
JMFF024H13+ CCGGTCTCGCGGTTCCGCCCCACCTCTACGTACTCGTCCAGCGGCAGCAGCCCTCTCGGC
rJMFF039H10- CCGGTCTCGCGGTTCCGCCCCACCTCTACGTACTCGTCCAGCGGCAGCAGCCCTCTCGGC
JMFF010A12+ CCGGTCTCGCGGTTCCGCCCCACCTCTACGTACTCGTCCAGCGGCAGCAGCCCTCTCGGC
JMFN029D23+ CCGGTCTCGCGGTTCCGCCCCACCTCTACGTACTCGTCCAGCGGCAGCAGCCCTCTCGGC
JMFF004D13+ CCGGTCTCGCGGTTCCGCCCCACCTCTACGTACTCGTCCAGCGGCAGCAGCCCTCTCGGC
JMFF039H10+ CCGGTCTCGCGGTTCCGCCCCACCTCTACGTACTCGTCCAGCGGCAGCAGCCCTCTCGGC
____________________________________________________________
consensus CCGGTCTCGCGGTTCCGCCCCACCTCTACGTACTCGTCCAGCGGCAGCAGCCCTCTCGGC
. : . : . : . : . : . :
JMSF021I11+ ATGTGGATCTCCTCCAGCAGCTCCAGCGATTTCTGCTTGCACACCGCCGGATCGGTGAAC
rJMSF021I11- ATGTGGATCTCCTCCAGCAGCTCCAGCGATTTCTGCTTGCACACCGCCGGATCGGTGAAC
rJMFF010A12- ATGTGGATCTCCTCCAGCAGCTCCAGCGATTTCTGCTTGCACACCGCCGGATCGGTGAAC
rJMFF024H13- ATGTGGATCTCCTCCAGCAGCTCCAGCGATTTCTGCTTGCACACCGCCGGATCGGTGAAC
rJMFF009A20- ATGTGGATCTCCTCCAGCAGCTCCAGCGATTTCTGCTTGCACACCGCCGGATCGGTGAAC
JMFN037O03+ ATGTGGATCTCCTCCAGCAGCTCCAGCGATTTCTGCTTGCACACCGCCGGATCGGTGAAC
JMFN031K12+ ATGTGGATCTCCTCAAGCAGCTCCAGCGATTTCTGCTTGCACACCGCCGGATCGGTGAAC
rJMFF004D13- ATGTGGATCTCCTCCAGCAGCTCCAGCGATTTCTGCTTGCACACCGCCGGATCGGTGAAC
JMFN008D11+ ATGTGGATCTCCTCCAGCAGCTCCAGCGATTTCTGCTTGCACACCGCCGGATCGGTGAAC
JMFN008O21+ ATGTGGATCTCCTCCAGCAGCTCCAGCGATTTCTGCTTGCACACCGCCGGATCGGTGAAC
JMFN013G10+ ATGTGGATCTCCTCCAGCAGCTCCAGCGATTTCTGCTTGCACACCGCCGGATCGGTGAAC
JMFF009A20+ ATGTGGATCTCCTCCAGCAGCTCCAGCGATTTCTGCTTGCACACCGCCGGATCGGTGAAC
JMFF048H05+ ATGTGGATCTCCTCCAGCAGCTCCAGCGATTTCTGCTTGCGCACCGCCGGATCGGTGAAC
JMFF024H13+ ATGTGGATCTCCTCCAGCAGCTCCAGCGATTTCTGCTTGCACACCGCCGGATCGGTGAAC
rJMFF039H10- ATGTGGATCTCCTCCAGCAGCTCCAGCGATTTCTGCTTGCACACCGCCGGATCGGTGAAC
JMFF010A12+ ATGTGGATCTCCTCCAGCAGCTCCAGCGATTTCTGCTTGCACACCGCCGGATCGGTGAAC
JMFN029D23+ ATGTGGATCTCCTCCAGCAGCTCCAGCGATTTCTGCTTGCACACCGCCGGATCGGTGAAC
JMFF004D13+ ATGTGGATCTCCTCCAGCAGCTCCAGCGATTTCTGCTTGCACACCGCCGGATCGGTGAAC
JMFF039H10+ ATGTGGATCTCCTCCAGCAGCTCCAGCGATTTCTGCTTGCACACCGCCGGATCGGTGAAC
____________________________________________________________
consensus ATGTGGATCTCCTCCAGCAGCTCCAGCGATTTCTGCTTGCACACCGCCGGATCGGTGAAC
. : . : . : . : . : . :
JMSF021I11+ ACCTCCGCGTTTTCGCGGTGGTTCACGGCGGTTTGCTGCGACGACATCTTCAATTTGATT
rJMSF021I11- ACCTCCGCGTTTTCGCGGTGGTTCACGGCGGTTTGCTGCGACGACATCTTCAATTTGATT
rJMFF010A12- ACCTCCGCGTTTTCGCGGTGGTTCACGGCGGTTTGCTGCGACGACATCTTCAATTTGATT
rJMFF024H13- ACCTCCGCGTTTTCGCGGTGGTTCACGGCGGTTTGCTGCGACGACATCTTCAATTTGATT
rJMFF009A20- ACCTCCGCGTTTTCGCGGTGGTTCACGGCGGTTTGCTGCGACGACATCTTCAATTTGATT
JMFN037O03+ ACCTCCGCGTTTTCGCGGTGGTTCACGGCGGTTTGCTGCGACGACATCTTCAATTTGATT
JMFN031K12+ ACCTCCGCGTTTTCGCGGTGGTTCACGGCGGTT---TGCGACGACATCTTCAATTTGATT
rJMFF004D13- ACCTCCGCGTTTTCGCGGTGGTTCACGGCGGTTTGCTGCGACGACATCTTCAATTTGATT
JMFN008D11+ ACCTCCGCGTTTTCGCGGTGGTTCACGGCGGTTTGCTGCGACGACATCTTCAATTTGATT
JMFN008O21+ ACCTCCGCGTTTTCGCGGTGGTTCACGGCGGTTTGCTGCGACGACATCTTCAATTTGATT
JMFN013G10+ ACCTCCGCGTTTTCGCGGTGGTTCACGGCGGTTTGCTGCGACGACATCTTCAATTTGATT
JMFF009A20+ ACCTCCGCGTTTTCGCGGTGGTTCACGGCGGTTTGCTGCGACGACATCTTCAATTTGATT
JMFF048H05+ ACCTCCGCGTTTTCGCGGTGGTTCACGGCGGTTTGCTGCGACGACATCTTCAATTTGATT
JMFF024H13+ ACCTCCGCGTTTTCGCGGTGGTTCACGGCGGTTTGCTGCGACGACATCTTCAATTTGATT
rJMFF039H10- ACCTCCGCGTTTTCGCGGTGGTTCACGGCGGTTTGCTGCGACGACATCTTCAATTTGATT
JMFF010A12+ ACCTCCGCGTTTTCGCGGTGGTTCACGGCGGTTTGCTGCGACGACATCTTCAATTTGATT
JMFN029D23+ ACCTCCGCGTTTTCGCGGTGGTTCACGGCGGTTTGCTGCGACGACATCTTCAATTTG
JMFF004D13+ ACCTCCGCGTTTTCGCGGTGGTTCACGGCGGTTTGCTGCGACGACATCTTCAATTTGATT
JMFF039H10+ ACCTCCGCGTTTTCGCGGTGGTTCACGGCGGTTTGCTGCGACGACATCTTCAATTTGATT
____________________________________________________________
consensus ACCTCCGCGTTTTCGCGGTGGTTCACGGCGGTTTGCTGCGACGACATCTTCAATTTGATT
. : . : . : . : . : . :
JMSF021I11+ GTGGACTGGAGAGGAAAAAGGTTAAAACGTAAAAGGGATTCTCGTCT
rJMSF021I11- GTGGACTGGAGAGGAAAAAGGTTAAAACGTAAAAGGGATTCTCGTCT
rJMFF010A12- GTGGACTGGAGANGAAAAAGGTTAAAACGTAAAAGGGATTCTCGTCTGAG
rJMFF024H13- GTGGACTGGAGAGGAAAAAGGTTAAAACGTAAAAGGGATTCTCGTCTGAGAGATTAT
rJMFF009A20- GTGGACTGGAGAGGAAAAAGGTTAAAACGTAAAAGGGATTCTCGTCTGAGAGATTAT
JMFN037O03+ GTGGACTGGAGAGGAAAAAGGTTAAAACGTAAAAG
JMFN031K12+ GTGGACTGGA
rJMFF004D13- GTGGACTGGAGAGGAAAAAGGTTAAAACGTAAAAGGGATTCTCGTCTGAGAGATTAT
JMFN008D11+ GTGGACTGGAGAGGAAAAAGGTTAAAACGTAAAAGGGA
JMFN008O21+ GTGGACTGGAGAGGAAAAAGGTTAAAACGTAAAA
JMFN013G10+ GTGGACTGGAGAGGAAAAAGGTTAAAACGTAAAAGG
JMFF009A20+ GTGGACTGGAGAGGAAAAAGGTTAAAACGTAAAAGGGATTCTCGTCTGAGAGATTAT
JMFF048H05+ GTGGACTGGAGTGGAAAAAGGTTAAAACGTAAAAGGGATTCTCGTCTGAGAGATTAT
JMFF024H13+ GTGGACTGGAGAGGAAAAAGGTTAAAACGTAAAAGGGATTCTCGTCTGAGAGATTAT
rJMFF039H10- GTGGACTGGAGAGGAAAAAGGTTAAAACGTAAAAGGGATTCTCGTCTGAGAGATTAT
JMFF010A12+ GTGGACTGGAGAGGAAAAAGGTTAAAACGTAAAAGGGATTCTCGTCTGAGAGATTAT
JMFF004D13+ GTGGACTGGAGAGGAAAAAGGTTAAAACGTAAAAGGGATTCTCGTCTGAGAGATTAT
JMFF039H10+ GTGGACTGGAGAGGAAAAAGGTTAAAACGTAAAAGGGATTCTCGTCTGAGAGATTATAGG
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consensus GTGGACTGGAGAGGAAAAAGGTTAAAACGTAAAAGGGATTCTCGTCTGAGAGATTATAGG