clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF016P11 | Sequence | 460 | 010307 (12) | gb|AFK43307.1| | 3e-41 | unknown [Lotus japonicus] | 802 | 010307 (12) | ref|XP_009605547.1| | 1e-143 | PREDICTED: probable CCR4-associated factor 1 homolog 6 [Nicotiana tomentosiform |
JMFF018N01 | Sequence | 214 | 010307 (12) | ||||||||
JMFF029G13 | Sequence | 399 | 010307 (12) | gb|AFK43307.1| | 2e-45 | unknown [Lotus japonicus] | 660 | 010307 (12) | ref|XP_009605547.1| | 3e-123 | PREDICTED: probable CCR4-associated factor 1 homolog 6 [Nicotiana tomentosiform |
JMFF034E13 | Sequence | 214 | 010307 (12) | ||||||||
JMFF045L21 | Sequence | 641 | 010307 (12) | ref|XP_009605547.1| | 5e-77 | PREDICTED: probable CCR4-associated factor 1 homolog 6 [Nicotiana tomentosiform | 618 | 010307 (12) | ref|XP_009605547.1| | 3e-105 | PREDICTED: probable CCR4-associated factor 1 homolog 6 [Nicotiana tomentosiform |
JMFF051M22 | Sequence | 596 | 010307 (12) | ref|XP_009605547.1| | 2e-67 | PREDICTED: probable CCR4-associated factor 1 homolog 6 [Nicotiana tomentosiform | 569 | 010307 (12) | ref|XP_004507083.1| | 2e-67 | PREDICTED: probable CCR4-associated factor 1 homolog 7-like [Cicer arietinum] |
JMSF026E01 | Sequence | 674 | 010307 (12) | ref|XP_009605547.1| | 2e-85 | PREDICTED: probable CCR4-associated factor 1 homolog 6 [Nicotiana tomentosiform | 747 | 010307 (12) | ref|XP_009605547.1| | 1e-139 | PREDICTED: probable CCR4-associated factor 1 homolog 6 [Nicotiana tomentosiform |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig010307============================================1132 1 -------------------------------------------------------->JMFF045L21 <------------------------------------------------------rJMFF045L21 4 ---------------------------------------------------->JMFF051M22 <-------------------------------------------------rJMFF051M22 43 ---------------------------------------->JMFF016P11 <---------------------------------------------------------------------rJMFF016P11 89 ----------------------------------------------------------->JMSF026E01 <---------------------------------------------------------------rJMSF026E01 132 ---------------------------------->JMFF029G13 <---------------------------------------------------------rJMFF029G13
The following clones don't have the opposite end in this pair.
------------------>JMFF018N01- ------------------>JMFF034E13-