| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF016P11 | Sequence | 460 | 010307 (12) | gb|AFK43307.1| | 3e-41 | unknown [Lotus japonicus] | 802 | 010307 (12) | ref|XP_009605547.1| | 1e-143 | PREDICTED: probable CCR4-associated factor 1 homolog 6 [Nicotiana tomentosiform |
| JMFF018N01 | Sequence | 214 | 010307 (12) | ||||||||
| JMFF029G13 | Sequence | 399 | 010307 (12) | gb|AFK43307.1| | 2e-45 | unknown [Lotus japonicus] | 660 | 010307 (12) | ref|XP_009605547.1| | 3e-123 | PREDICTED: probable CCR4-associated factor 1 homolog 6 [Nicotiana tomentosiform |
| JMFF034E13 | Sequence | 214 | 010307 (12) | ||||||||
| JMFF045L21 | Sequence | 641 | 010307 (12) | ref|XP_009605547.1| | 5e-77 | PREDICTED: probable CCR4-associated factor 1 homolog 6 [Nicotiana tomentosiform | 618 | 010307 (12) | ref|XP_009605547.1| | 3e-105 | PREDICTED: probable CCR4-associated factor 1 homolog 6 [Nicotiana tomentosiform |
| JMFF051M22 | Sequence | 596 | 010307 (12) | ref|XP_009605547.1| | 2e-67 | PREDICTED: probable CCR4-associated factor 1 homolog 6 [Nicotiana tomentosiform | 569 | 010307 (12) | ref|XP_004507083.1| | 2e-67 | PREDICTED: probable CCR4-associated factor 1 homolog 7-like [Cicer arietinum] |
| JMSF026E01 | Sequence | 674 | 010307 (12) | ref|XP_009605547.1| | 2e-85 | PREDICTED: probable CCR4-associated factor 1 homolog 6 [Nicotiana tomentosiform | 747 | 010307 (12) | ref|XP_009605547.1| | 1e-139 | PREDICTED: probable CCR4-associated factor 1 homolog 6 [Nicotiana tomentosiform |
This contig is upended
. : . : . : . : . : . :
rJMFF051M22- ACCCTGGAGAGTTTTTTTTTTTTTTTGTGTGTTGTGGGTATTCACAGGTTTT
rJMFF045L21- ACCCTGGAGAGTTTTTTTTTTTTTTTGTGTGTTGTGGGTATTCACAGGTTTT
rJMFF016P11- TTCACAGGTTTT
____________________________________________________________
consensus ACCCTGGAGAGTTTTTTTTTTTTTTTGTGTGTTGTGGGTATTCACAGGTTTT
. : . : . : . : . : . :
rJMFF051M22- ATAAAATAACTTTTTAGTCTTGTTCATTCTGTCAAGAAGAAGAAGAAGATGATGATGATT
rJMFF045L21- ATAAAATAACTTTTTAGTCTTGTTCATTCTGTCAAGAAGAAGAAGAAGATGATGATGATT
rJMSF026E01- AGAAGAAGAAGAAGATGATGATGATT
rJMFF029G13- AAATAACTTTTTAGTCTTGTTCATTCTGTCAAGAAGAAGAAGAAGATGATGATGATT
rJMFF016P11- ATAAAATAACTTTTTAGTCTTGTTCATTCTGTCAAGAAGAAGAAGAAGATGATGATGATT
____________________________________________________________
consensus ATAAAATAACTTTTTAGTCTTGTTCATTCTGTCAAGAAGAAGAAGAAGATGATGATGATT
. : . : . : . : . : . :
rJMFF051M22- CAACACCTAAACCATACAATACACCTACATATTTCTCCACAGAGCTGCTAAAGAAGCTCT
rJMFF045L21- CAACACCTAAACCATACAATACACCTACATATTTCTCCACAGAGCTGCTAAAGAAGCTCT
rJMSF026E01- CAACACCTAAACCATACAATACACCTGCATATTTCTCCACAGAGCTGCTAAAGAAGCTCT
rJMFF029G13- CAACACCTAAACCATACAATACACCTGCATATTTCTCCACAGAGCTGCTAAAGAAGCTCT
rJMFF016P11- CAACACCTAAACCATACAATACACCTGCATATTTCTCCACAGAGCTGCTAAAGAAGCTCT
____________________________________________________________
consensus CAACACCTAAACCATACAATACACCTGCATATTTCTCCACAGAGCTGCTAAAGAAGCTCT
. : . : . : . : . : . :
rJMFF051M22- GTTTCAACTTCCTGAAAGTGCAAGCCGTGAGCAAGCTATCCGACCCAGCCTGGTGGCAAA
rJMFF045L21- GTTTCAACTTCCTGAAAGTGCAAGCCGTGAGCAAGCTATCCGACCCAGCCTGGTGGCAAA
rJMSF026E01- GTTTCAACTTCCTGAAAGTGCAAGCCGTGAGCAAGCTATCCGACCCAGCCTGGTGGCAAA
rJMFF029G13- GTTTCAACTTCCTGAAAGTGCAAGCCGTGAGCAAGCTATCCGACCCAGCCTGGTGGCAAA
rJMFF016P11- GTTTCAACTTCCTGAAAGTGCAAGCCGTGAGCAAGCTATCCGACCCAGCCTGGTGGCAAA
____________________________________________________________
consensus GTTTCAACTTCCTGAAAGTGCAAGCCGTGAGCAAGCTATCCGACCCAGCCTGGTGGCAAA
. : . : . : . : . : . :
rJMFF051M22- TCCCAACTCTCTTCACCTCCAAAAGCTCTGCAAGCTTGTTCAACCACACCATGGAGGCTA
rJMFF045L21- TCCCAACTCTCTTCACCTCCAAAAGCTCTGCAAGCTTGTTCAACC-CACCATGGAGGCTA
rJMSF026E01- TCCCAACTCTCTTCACCTCCAAAAGCTCTGCAAGCTTGTTCAACC-CACCATGGAGGCTA
rJMFF029G13- TCCCAACTCTCTTCACCTCCAAAAGCTCTGCAAGCTTGTTCAACC-CACCATGGAGGCTA
rJMFF016P11- TCCCAACTCTCTTCACCTCCAAAAGCTCTGCAAGCTTGTTCAACC-CACCATGGAGGCTA
____________________________________________________________
consensus TCCCAACTCTCTTCACCTCCAAAAGCTCTGCAAGCTTGTTCAACC-CACCATGGAGGCTA
. : . : . : . : . : . :
rJMFF051M22- TTGCAGAACTTCATCAAGTGTTTGATATCATACACAACCGGGAAATAAGCGTTGATCAAT
rJMFF045L21- TTGCAGAACTTCATCAAGTGTTTGATATCATACACAACCGGGAAATAAGCGTTGATCAAT
rJMSF026E01- TTGCAGAACTTCATCAAGTGTTTGATATCATACACAACCGGGAAATAAGCGTTGATCAAT
rJMFF029G13- TTGCAGAACTTCATCAAGTGTTTGATATCATACACAACCGGGAAATAAGCGTTGATCAAT
rJMFF016P11- TTGCAGAACTTCATCAAGTGTTTGATATCATACACAACCGGGAAATAAGCGTTGATCAAT
____________________________________________________________
consensus TTGCAGAACTTCATCAAGTGTTTGATATCATACACAACCGGGAAATAAGCGTTGATCAAT
. : . : . : . : . : . :
rJMFF051M22- GTAAAGAACCCAGGCTGCGAATCCGGCAACATTTGACAAGTCAAGAGCTTGAGAAGATAG
rJMFF045L21- GTAAAGAACCCAGGCTGCGAATCCGGCAACATTTGACAAGTCAAGAGCTTGAGAAGATAG
rJMSF026E01- GTAAAGAACCCAGGCTGCGAATCCGGCAACATTTGACAAGTCAAGAGCTTGAGAAGATAG
rJMFF029G13- GTAAAGAACCCAGGCTGCGAATCCGGCAACATTTGACAAGTCAAGAGCTTGAGAAGATAG
rJMFF016P11- GTAAAGAACCCAGGCTGCGAATCCGGCAACATTTGACAAGTCAAGAGCTTGAGAAGATAG
____________________________________________________________
consensus GTAAAGAACCCAGGCTGCGAATCCGGCAACATTTGACAAGTCAAGAGCTTGAGAAGATAG
. : . : . : . : . : . :
rJMFF051M22- CCGAAATCGTAGCCACTGTGGAACGTAACCCAATGAACATTATCGTTCAACACCACACCG
rJMFF045L21- CCGAAATCGTAGCCACTGTGGAACGTAACCCAATGAACATTATCGTTCAACACCACACCG
rJMSF026E01- CCGAAATCGTAGCCACTGTGGAACGTAACCCAATGAACATTATCGTTCAACACCACACCG
rJMFF029G13- CCGAAATCGTAGCCACTGTGGAACGTAACCCAATGAACATTATCGTCCAACACCACACCG
rJMFF016P11- CCGAAATCGTAGCCACTGTGGAACGTAACCCAATGAACATTATCGTTCAACACCACACCG
JMSF026E01+ TCGTTCAACACCACACCG
____________________________________________________________
consensus CCGAAATCGTAGCCACTGTGGAACGTAACCCAATGAACATTATCGTTCAACACCACACCG
. : . : . : . : . : . :
rJMFF051M22- GATGACATGAGCAGCTCCCCAAACCGCCTGGCGTCGATCCCTTTCTCGATGTTCTTCTGG
rJMFF045L21- GATGACATGAGCAGCTCCCCAAACCGCCTGGCGTCGATCCCTTTCTCGATGTTCTTCTGG
rJMSF026E01- GATGACATGAGCAGCTCCCCAAACCGCCTGGCGTCGATCCCTTTCTCGATGTTCTTCTGG
rJMFF029G13- GATGACATGAGCAGCTCCCCAAACCGCCTGGCGTCGATCCCTTTCTCGATGTTCTTCTGG
rJMFF016P11- GATGACATGAGCAGCTCCCCAAACCGCCTGGCGTCGATCCCTTTCTCGATGTTCTTCTGG
JMSF026E01+ GATGACATGAGCAGCTCCCCAAACCGCCNGGCGTCGATCCCTTTCTCGATGTTCTTCTGG
JMFF051M22+ G
JMFF045L21+ CCCAAACCGCCTGGCGTCGATCCCTTTCTCGATGTTCTTCTGG
____________________________________________________________
consensus GATGACATGAGCAGCTCCCCAAACCGCCTGGCGTCGATCCCTTTCTCGATGTTCTTCTGG
. : . : . : . : . : . :
rJMFF051M22- AAGTCGATCCCGCTGTGGCGCAACAGCTCTATGGAAT
rJMFF045L21- AAGTCGATCCCGCTGTGGCGCAACAGCTCTATGGAATCGTTGGCGAACACATCCTCGTTG
rJMSF026E01- AAGTCGATCCCGCTGTGGCGCAACAGCTCTATGGAATCGTTGGCGAACACATCCTCGTTG
rJMFF029G13- AAGTCGATCCCGCTGTGGCGCAACAGCTCTATGGAATCGTTGGCGAACACATCCTCGTTG
rJMFF016P11- AAGTCGATCCCGCTGTGGCGCAACAGCTCTATGGAATCGTTGGCGAACACATCCTCGTTG
JMSF026E01+ AAGTCGATCCCGCTGTGGCGCAACAGCTCTATGGAATCGTTGGCGAACACATCCTCGTTG
JMFF051M22+ AAGTCGATCCCGCTGTGGCGCAACAGCTCTATGGAATCGTTGGCGAACACATCCTCGTTG
JMFF045L21+ AAGTCGATCCCGCTGTGGCGCAACAGCTCTATGGAATCGTTGGCGAACACATCCTCGTTG
____________________________________________________________
consensus AAGTCGATCCCGCTGTGGCGCAACAGCTCTATGGAATCGTTGGCGAACACATCCTCGTTG
. : . : . : . : . : . :
rJMFF045L21- GGATTGAACTCCCGGAAGTTGAACTGC
rJMSF026E01- GGATTGAACTCCCGGAAGTTGAACTGCCAGATGCAGTGGGTGTTGTGGGTCCCACCGCAG
rJMFF029G13- GGATTGAACTCCCGGAAGTTGAACTGCCAGATGCAGTGGGTGTTGTGGGTCCCACCGCAG
rJMFF016P11- GGATTGAACTCCCGGAAGTTGAACTGCCAGATGCAGTGGGTGTTGTGGGTCCCACCGCAG
JMSF026E01+ GGATTGAACTCCCGGAAGTTGAACTGCCAGATGCAGTGGGTGTTGTGGGTCCCACCGCAG
JMFF051M22+ GGATTGAACTCCCGGAAGTTGAACTGCCAGATGCAGTGGGTGTTGTGGGTCCCACCGCAG
JMFF045L21+ GGATTGAACTCCCGGAAGTTGAACTGCCAGATGCAGTGGGTGTTGTGGGTCCCACCGCAG
____________________________________________________________
consensus GGATTGAACTCCCGGAAGTTGAACTGCCAGATGCAGTGGGTGTTGTGGGTCCCACCGCAG
. : . : . : . : . : . :
rJMSF026E01- TTGGGCAGGTTCCCTTCCTCGTCGGAGAAGGTGAGCCCCAGCTGGATGAGCTTCAGCATG
rJMFF029G13- TTGGGCAGGTTCCCTTCCTCGTCGGAGAAGGTGAGCCCCAGCTGGATGAGCTTCAGCATG
rJMFF016P11- TTGGGCAGGTTCCCTTCCTCGTCGGAGAAGGTGAGCCCCAGCTGGATGAGCTTCAGCATG
JMFF016P11+ TCCTCGTCGGAGAAGGTGAGCCCCAGCTGGATGAGCTTCAGCATG
JMFF029G13+ GGGCAGGTTCCCTTCCTCGTCGGAGAAGGTGAGCCCCAGCTGGATGAGCTTCAGCATG
JMSF026E01+ TTGGGCAGGTTCCCTTCCTCGTCGGAGAAGGTGAGCCCCAGCTGGATGAGCTTCAGCATG
JMFF051M22+ TTGGGCAGGTTCCCTTCCTCGTCGGAGAAGGTGAGCCCCAGCTGGATGAGCTTCAGCATG
JMFF045L21+ TTGGGCAGGTTCCCTTCCTCGTCGGAGAAGGTGAGCCCCAGCTGGATGAGCTTCAGCATG
____________________________________________________________
consensus TTGGGCAGGTTCCCTTCCTCGTCGGAGAAGGTGAGCCCCAGCTGGATGAGCTTCAGCATG
. : . : . : . : . : . :
rJMSF026E01- TCCACGTTGTCCTTGAGCGTCTGGTAATGGTAGTCGCAGCTGTTCTTGAAGTTGCCCACC
rJMFF029G13- TCCA
rJMFF016P11- TCCACGTTGTCCTTGAGCGTCTGGTAATGGTAGTCGCAGCTGTTCTTGAAGTTGCCCACC
JMFF016P11+ TCCACGTTGTCCTTGAGCGTCTGGTAATGGTAGTCGCAGCTGTTCTTGAAGTTGCCCACC
JMFF029G13+ TCCACGTTGTCCTTGAGCGTCTGGTAATGGTAGTCGCAGCTGTTCTTGAAGTTGCCCACC
JMSF026E01+ TCCACGTTGTCCTTGAGCGTCTGGTAATGGTAGTCGCAGCTGTTCTTGAAGTTGCCCACC
JMFF051M22+ TCCACGTTGTCCTTGAGCGTCTGGTAATGGTAGTCGCAGCTGTTCTTGAAGTTGCCCACC
JMFF045L21+ TCCACGTTGTCCTTGAGCGTCTGGTAATGGTAGTCGCAGCTGTTCTTGAAGTTGCCCACC
____________________________________________________________
consensus TCCACGTTGTCCTTGAGCGTCTGGTAATGGTAGTCGCAGCTGTTCTTGAAGTTGCCCACC
. : . : . : . : . : . :
rJMSF026E01- GGNCCGGATAACCACGCC-GGGGAACTCCGTGTCCATG
rJMFF016P11- GG-CCGGATAACCACGCCGGGGGAACTCCGTGTCCATGGCGATGTACGGATACTCATCCA
JMFF016P11+ GG-CCGGATAACCACGCC-GGGGAACTCCGTGTCCATGGCGATGTACGGATACTCATCCA
JMFF029G13+ GG-CCGGATAACCACGCC-GGGGAACTCCGTGTCCATGGCGATGTACGGATACTCATCCA
JMSF026E01+ GG-CCGGATAACCACGCC-GGGGAACTCCGTGTCCATGGCGATGTACGGATACTCATCCA
JMFF051M22+ GG-CCGGATAACCACGCC-GGGGAACTCCGTGTCCATGGCGATGTACGGATACTCATCCA
JMFF045L21+ GG-CCGGATAACCACGCC-GGGGAACTCCGTGTCCATGGCGATGTACGGATACTCATCCA
____________________________________________________________
consensus GG-CCGGATAACCACGCC-GGGGAACTCCGTGTCCATGGCGATGTACGGATACTCATCCA
. : . : . : . : . : . :
rJMFF016P11- CC
JMFF016P11+ CCACTTCCCGGATCAGGGCAAACTCCTGCTCTAGATTATAATCCCACACTTCCCGAATCT
JMFF029G13+ CCACTTCCCGGATCAGGGCAAACTCCTGCTCTAGATTATAATCCCACACTTCCCGAATCT
JMSF026E01+ CCACTTCCCGGATCAGGGCAAACTCCTGCTCTAGATTATAATCCCACACTTCCCGAATCT
JMFF051M22+ CCACTTACCGGATCAGGGCAAACTCCTGCTCTAGATTATAATCCCACACTTCCCGAATCT
JMFF045L21+ CCACTTACCGGATCAGGGCAAACTCCTGCTCTAGATTATAATCCCACACTTCCCGAATCT
____________________________________________________________
consensus CCACTTCCCGGATCAGGGCAAACTCCTGCTCTAGATTATAATCCCACACTTCCCGAATCT
. : . : . : . : . : . :
JMFF016P11+ CAACCGAATCTGAATCCGGATCCTTCTCAGCTACCATCGCCATCTACCAGAAACCACTTT
JMFF029G13+ CAACCGAATCTGAATCCGGATCCTTCTCAGCTACCATCGCCATCTACCAGAAACCACTTT
JMSF026E01+ CAACCGAATCTGAATCCGGATCCTTCTCAGCTACCATCGCCATCTACCAGAAACCACTTT
JMFF051M22+ CAACCGAATCTGAATCCGGATCCTTCTCAGCTACCATCGCCATCTACCAGAAACCACTTT
JMFF018N01+ TTCTCAGCTACCATCGCCATCTACCAGAAACCACTTT
JMFF034E13+ TTCTCAGCTACCATCGCCATCTACCAGAAACCACTTT
JMFF045L21+ CAACCGAATCTGAATCCGGATCCTTCTCAGCTACCATCGCCATCTACCAGAAACCACTTT
____________________________________________________________
consensus CAACCGAATCTGAATCCGGATCCTTCTCAGCTACCATCGCCATCTACCAGAAACCACTTT
. : . : . : . : . : . :
JMFF016P11+ TGCTTCACCACCATACGAAATCCCAGATCCCAGATCCCAGATCTATTCTATAGGCTTCAA
JMFF029G13+ TGCTTCACCACCATACGAAATCCCAGATCCCAGATCCCAGATCTATTCTATAGGCTTCAA
JMSF026E01+ TGCTTCACCACCATACGAAATCCCAGATCCCAGATCCCAGATCTATTCTATAGGCTTCAA
JMFF051M22+ TGCTTCACCACCATACGAAATCCCAGATCCCAGATCCCAGATCTATTCTATAGGCTTCAA
JMFF018N01+ TGCTTCACCACCATACGAAATCCCAGATCCCAGATCCCAGATCTATTCTATAGGCTTCAA
JMFF034E13+ TGCTTCACCACCATACGAAATCCCAGATCCCAGATCCCAGATCTATTCTATAGGCTTCAA
JMFF045L21+ TGCTTCACCACCATACGAAATCCCAGATCCCAGATCCCAGATCTATTCTATAGGCTTCAA
____________________________________________________________
consensus TGCTTCACCACCATACGAAATCCCAGATCCCAGATCCCAGATCTATTCTATAGGCTTCAA
. : . : . : . : . : . :
JMFF016P11+ CTTCAAACAGATTAGATCTTTGTATACACAAAGATTCAAACTTTGAATCGAAAATCGGCA
JMFF029G13+ CTTCAAACAGATTAGATCTTTGTATACACAAAGATTCAAACTT
JMSF026E01+ CTTCAAACAGATTAGATCTTTGTATACACAAAGATTCAAACTTTGAATCGAAAATCGGCA
JMFF051M22+ CTTCAAACAGATTAGATCTTTGTATACACAAAGATTCAAACTTTGAATCGAAAATCGGCA
JMFF018N01+ CTTCAAACAGATTAGATCTTTGTATACACAAAGATTCAAACTTTGAATCGAAAATCGGCA
JMFF034E13+ CTTCAAACAGATTAGATCTTTGTATACACAAAGATTCAAACTTTGAATCGAAAATCGGCA
JMFF045L21+ CTTCAAACAGATTAGATCTTTGTATACACAAAGATTCAAACTTTGAATCGAAAATCGGCA
____________________________________________________________
consensus CTTCAAACAGATTAGATCTTTGTATACACAAAGATTCAAACTTTGAATCGAAAATCGGCA
. : . : . : . : . : . :
JMFF016P11+ GGAGAGGTCCTAGGTTTTGACTGGAAAAACAAAAGAGATATAGAAGACGACGACGAT
JMSF026E01+ GGAGAGGTCCTAGGTTTTGACTGGAAAAACAAAAGAGATATAGAAGACGACGACGAT
JMFF051M22+ GGAGAGGTCCTAGGTTTTGACTGGAAAAACAAAAGAGATATAGAAGACGACGACGAT
JMFF018N01+ GGAGAGGTCCTAGGTTTTGACTGGAAAAACAAAAGAGATATAGAAGACGACGACGAT
JMFF034E13+ GGAGAGGTCCTAGGTTTTGACTGGAAAAACAAAAGAGATATAGAAGACGACGACGAT
JMFF045L21+ GGAGAGGTCCTAGGTTTTGACTGGAAAAACAAAAGAGATATAGAAGACGACGACGATCGG
____________________________________________________________
consensus GGAGAGGTCCTAGGTTTTGACTGGAAAAACAAAAGAGATATAGAAGACGACGACGATCGG