clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF002G03 | Sequence | 562 | 013794 (9) | ref|XP_006350379.1| | 1e-72 | PREDICTED: succinyl-CoA ligase [ADP-forming] subunit alpha-2, mitochondrial-lik | 749 | 013794 (9) | ref|NP_001234574.1| | 3e-73 | succinyl-CoA ligase [ADP-forming] subunit alpha-2, mitochondrial [Solanum lycop |
JMFF020C10 | Sequence | 560 | 013794 (9) | ref|XP_006350379.1| | 8e-76 | PREDICTED: succinyl-CoA ligase [ADP-forming] subunit alpha-2, mitochondrial-lik | 730 | 013794 (9) | ref|NP_001234574.1| | 6e-68 | succinyl-CoA ligase [ADP-forming] subunit alpha-2, mitochondrial [Solanum lycop |
JMFF025A18 | Sequence | 739 | 013794 (9) | gb|AFL48180.1| | 1e-71 | succinyl-CoA synthetase [Capsicum annuum] gb|AFL48181.1| succinyl-CoA synthetase | |||||
JMFF041O09 | Sequence | 655 | 013794 (9) | ref|XP_006350379.1| | 1e-111 | PREDICTED: succinyl-CoA ligase [ADP-forming] subunit alpha-2, mitochondrial-lik | 578 | 013794 (9) | ref|XP_009788411.1| | 2e-38 | PREDICTED: succinyl-CoA ligase [ADP-forming] subunit alpha-2, mitochondrial-lik |
JMSF040K13 | Sequence | 656 | 013794 (9) | ref|XP_006350379.1| | 5e-108 | PREDICTED: succinyl-CoA ligase [ADP-forming] subunit alpha-2, mitochondrial-lik | 932 | 013794 (9) | gb|AFL48180.1| | 3e-118 | succinyl-CoA synthetase [Capsicum annuum] gb|AFL48181.1| succinyl-CoA synthetase |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig013794============================================1430 44 ------------------------------------->JMFF002G03 <--------------------------------------------------rJMFF002G03 44 -------------------------------------->JMFF020C10 <-------------------------------------------------rJMFF020C10 68 ------------------------------------------->JMFF041O09 <---------------------------------------rJMFF041O09 96 --------------------------------------------->JMSF040K13 <----------------------------------------------------------------rJMSF040K13
The following clones don't have the opposite end in this pair.
<--------------------------------------------------rJMFF025A18-