| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF002G03 | Sequence | 562 | 013794 (9) | ref|XP_006350379.1| | 1e-72 | PREDICTED: succinyl-CoA ligase [ADP-forming] subunit alpha-2, mitochondrial-lik | 749 | 013794 (9) | ref|NP_001234574.1| | 3e-73 | succinyl-CoA ligase [ADP-forming] subunit alpha-2, mitochondrial [Solanum lycop |
| JMFF020C10 | Sequence | 560 | 013794 (9) | ref|XP_006350379.1| | 8e-76 | PREDICTED: succinyl-CoA ligase [ADP-forming] subunit alpha-2, mitochondrial-lik | 730 | 013794 (9) | ref|NP_001234574.1| | 6e-68 | succinyl-CoA ligase [ADP-forming] subunit alpha-2, mitochondrial [Solanum lycop |
| JMFF025A18 | Sequence | 739 | 013794 (9) | gb|AFL48180.1| | 1e-71 | succinyl-CoA synthetase [Capsicum annuum] gb|AFL48181.1| succinyl-CoA synthetase | |||||
| JMFF041O09 | Sequence | 655 | 013794 (9) | ref|XP_006350379.1| | 1e-111 | PREDICTED: succinyl-CoA ligase [ADP-forming] subunit alpha-2, mitochondrial-lik | 578 | 013794 (9) | ref|XP_009788411.1| | 2e-38 | PREDICTED: succinyl-CoA ligase [ADP-forming] subunit alpha-2, mitochondrial-lik |
| JMSF040K13 | Sequence | 656 | 013794 (9) | ref|XP_006350379.1| | 5e-108 | PREDICTED: succinyl-CoA ligase [ADP-forming] subunit alpha-2, mitochondrial-lik | 932 | 013794 (9) | gb|AFL48180.1| | 3e-118 | succinyl-CoA synthetase [Capsicum annuum] gb|AFL48181.1| succinyl-CoA synthetase |
This contig is upended
. : . : . : . : . : . :
JMFF002G03- ATTTCAAATCAAAAAAGAGGAGTAAACATAAGCTAAGCTACGAGAGAGAG
JMFF020C10- ATTTCAAATCAAAAAAGAGGAGTAAACATAAGCTAAGCTACGAGAGAGAG
JMSF040K13- AAGCTAAGCTACGAGAGAGAG
____________________________________________________________
consensus ATTTCAAATCAAAAAAGAGGAGTAAACATAAGCTAAGCTACGAGAGAGAG
. : . : . : . : . : . :
JMFF002G03- AGAGAGAAAAAGAGAAAGAGAAAGAGAGAGTAGTTATGGCTTGGCAAACGGCGAGATTGA
JMFF020C10- AGAGAGAAAAAGAGAAAGAGAAAGAGAGAGTAGTTATGGCTTGGCAAACGGCGAGATTGA
JMSF040K13- AGAGAGAAAAAGAGAAAGAGAAAGAGAGAGTAGTTATGGCTTGGCAAACGGCGAGATTGA
JMFF041O09- AGAAAGAGAGAGTAGTTATGGCTTGGCAAACGGCGAGATTGA
____________________________________________________________
consensus AGAGAGAAAAAGAGAAAGAGAAAGAGAGAGTAGTTATGGCTTGGCAAACGGCGAGATTGA
. : . : . : . : . : . :
JMFF002G03- TCGCGAACGTGTCAAAGAAGGTGAGGCCTATCACGCAATCACCGCTGTGGCAGCAGCAGC
JMFF020C10- TCGCGAACGTGTCAAAGAAGGTGAGGCCTATCACGCAATCACCGCTGTGGCAGCAGCAGC
JMSF040K13- TCGCGAACGTGTCAAAGAAGGTGAGGCCTATCACGCAATCACCGCTGTGGCAGCAGCAGC
JMFF041O09- TCGCGAACGTGTCAAAGAAGGTGAGGCCTATCACGCAATCACCGCTGTGGCAGCAGCAGC
____________________________________________________________
consensus TCGCGAACGTGTCAAAGAAGGTGAGGCCTATCACGCAATCACCGCTGTGGCAGCAGCAGC
. : . : . : . : . : . :
JMFF002G03- AGCACCGACTATTCGGATCCCCGGCGCCGGAAGTCTTCGTGGACAAGAACACCCGCGTCA
JMFF020C10- AGCACCGACTATTCGGATCCCCGGCGCCGGAAGTCTTCGTGGACAAGAACACCCGCGTCA
JMSF040K13- AGCACCGACTATTCGGATCCCCGGCGCCGGAAGTCTTCGTGGACAAGAACACCCGCGTCA
JMFF041O09- AGCACCGACTATTCGGATCCCCGGCGCCGGAAGTCTTCGTGGACAAGAACACCCGCGTCA
____________________________________________________________
consensus AGCACCGACTATTCGGATCCCCGGCGCCGGAAGTCTTCGTGGACAAGAACACCCGCGTCA
. : . : . : . : . : . :
JMFF002G03- TATGTCAAGGTATCACGGGGAAGAACGGCACCTTCCACACCGAACAGGCCATCGAATATG
JMFF020C10- TATGTCAAGGTATCACGGGGAAGAACGGCACCTTCCACACCGAACAGGCCATCGAATATG
JMSF040K13- TATGTCAAGGTATCACGGGGAAGAACGGCACCTTCCACACCGAACAGGCCATCGAATATG
JMFF041O09- TATGTCAAGGTATCACGGGGAAGAACGGCACCTTCCACACCGAACAGGCCATCGAATATG
____________________________________________________________
consensus TATGTCAAGGTATCACGGGGAAGAACGGCACCTTCCACACCGAACAGGCCATCGAATATG
. : . : . : . : . : . :
JMFF002G03- GCACCAAAATGGTTGGTGGAGTCACCCCAAAAAAGGGTGGTACTGAACACCTTGGACTTC
JMFF020C10- GCACCAAAATGGTTGGTGGAGTCACCCCAAAAAAGGGTGGTACTGAACACCTTGGACTTC
JMSF040K13- GCACCAAAATGGTTGGTGGAGTCACCCCAAAAAAGGGTGGTACTGAACACCTTGGACTTC
JMFF041O09- GCACCAAAATGGTTGGTGGAGTCACCCCAAAAAAGGGTGGTACTGAACACCTTGGACTTC
____________________________________________________________
consensus GCACCAAAATGGTTGGTGGAGTCACCCCAAAAAAGGGTGGTACTGAACACCTTGGACTTC
. : . : . : . : . : . :
JMFF002G03- CAGTTTTCAACACTGTTGCAGACGCAAAAGCTGAAACCAAGGCTAATGCTTCAGTTATCT
JMFF020C10- CAGTTTTCAACACTGTTGCAGACGCAAAAGCTGAAACCAAGGCTAATGCTTCAGTTATCT
JMSF040K13- CAGTTTTCAACACTGTTGCAGACGCAAAAGCTGAAACCAAGGCTAATGCTTCAGTTATCT
JMFF041O09- CAGTTTTCAACACTGTTGCAGACGCAAAAGCTGAAACCAAGGCTAATGCTTCAGTTATCT
____________________________________________________________
consensus CAGTTTTCAACACTGTTGCAGACGCAAAAGCTGAAACCAAGGCTAATGCTTCAGTTATCT
. : . : . : . : . : . :
JMFF002G03- ATGTACCTCCCCCCTTTGCTGGAGCAGCGATTATGGAGGCAATGGAAGCTGAATTAGATT
JMFF020C10- ATGTACCTCCCCCCTTTGCTGGAGCAGCGATTATGGAGGCAATGGAAGCTGAATTAGATT
JMSF040K13- ATGTACCTCCCCCCTTTGCTGGAGCAGCGATTATGGAGGCAATGGAAGCTGAATTAGATT
JMFF041O09- ATGTACCTCCCCCCTTTGCTGGAGCAGCGATTATGGAGGCAATGGAAGCTGAATTAGATT
rJMSF040K13+ GAGCAGCGATTATGGAGGCAATGGAAGCTGAATTAGATT
____________________________________________________________
consensus ATGTACCTCCCCCCTTTGCTGGAGCAGCGATTATGGAGGCAATGGAAGCTGAATTAGATT
. : . : . : . : . : . :
JMFF002G03- T-GGTTGTGTGCATCACAGAGGGAATTCCTCAGCATGATATGGTTAAAGTAAAAGCTGCT
JMFF020C10- T-GGTTGTGTGCATCACAGAGGGAATTCCTCAGCATGATATGGTTAAAGTAAAAGCTGCT
JMSF040K13- T-GGTTGTGTGCATCACAGAGGGAATTCCTCAGCATGATATGGTTAAAGTAAAAGCTGCT
JMFF041O09- T-GGTTGTGTGCATCACAGAGGGAATTCCTCAGCATGATATGGTTAAAGTAAAAGCTGCT
rJMSF040K13+ TNGGTTGTGTGCATCACAGAGGGAATTCCTCAGCATGATATGGTTAAAGTAAAAGCTGCT
____________________________________________________________
consensus T-GGTTGTGTGCATCACAGAGGGAATTCCTCAGCATGATATGGTTAAAGTAAAAGCTGCT
. : . : . : . : . : . :
JMFF002G03- CTTAAACAGCAGA
JMFF020C10- CTTAAACAGCAGACCAAAACTCGTCTTATTG
JMSF040K13- CTTAAACAGCAGACCAAAACTCGTCTTATTGGTCCAAATTGCCCTGGTATCATCAAACCA
JMFF041O09- CTTAAACAGCAGACCAAAACTCGTCTTATTGGTCCAAATTGCCCTGGTATCATCAAACCA
rJMSF040K13+ CTTAAACAGCAGACCAAAACTCGTCTTATTGGTCCAAATTGCCCTGGTATCATCAAACCA
____________________________________________________________
consensus CTTAAACAGCAGACCAAAACTCGTCTTATTGGTCCAAATTGCCCTGGTATCATCAAACCA
. : . : . : . : . : . :
JMSF040K13- GGTGAATGCAAAATTGGAATTATGCCTGGATACATTCACAAGCCTGGACGTATTGGAATT
JMFF041O09- GGTGAATGCAAAATTGGAATTATGCCTGGATACATTCACAAGCCTGGACGTATTGGAATT
rJMSF040K13+ GGTGAATGCAAAATTGGAATTATGCCTGGATACATTCACAAGCCTGGACGTATTGGAATT
____________________________________________________________
consensus GGTGAATGCAAAATTGGAATTATGCCTGGATACATTCACAAGCCTGGACGTATTGGAATT
. : . : . : . : . : . :
JMSF040K13- GTTTCTCGATCTGGCACATTGACATATGAAGCAGT
JMFF041O09- GTTTCTCGATCTGGCACATTGACATATGAAGCAGTTTTCCAAACGACTG
rJMSF040K13+ GTTTCTCGATCTGGCACATTGACATATGAAGCAGTTTTCCAAACAACTGCTGTTGGCCTT
rJMFF025A18+ GATCTGGCACATTGACATATGAAGCAGTTTTCCAAACAACTGCTGTTGGCCTT
rJMFF020C10+ CATTGACATATGAAGCAGTTTTCCAANCAACTGCTGTTGNCCTT
rJMFF002G03+ GATCTGGCACATTGACATATGAAGCAGTTTTCCAAACAACTGCTGTTGGCCTT
____________________________________________________________
consensus GTTTCTCGATCTGGCACATTGACATATGAAGCAGTTTTCCAAACAACTGCTGTTGGCCTT
. : . : . : . : . : . :
rJMSF040K13+ GGGCAATCAACCTGTGTGGGGATTGGTGGGGACCCTTTCAATGGTACAAATTTTGTTGAT
rJMFF025A18+ GGGCAATCAACCTGTGTGGGGATTGGTGGGGACCCTTTCAATGGTACAAATTTTGTTGAT
rJMFF020C10+ GGGCAATCAACCTGTGTGGGGATTGGTGGGGACCCTTTCAATGGTACAAATTTTGTTGAT
rJMFF002G03+ GGGCAATCAACCTGTGTGGGGATTGGTGGGGACCCTTTCAATGGTACAAATTTTGTTGAT
____________________________________________________________
consensus GGGCAATCAACCTGTGTGGGGATTGGTGGGGACCCTTTCAATGGTACAAATTTTGTTGAT
. : . : . : . : . : . :
rJMSF040K13+ TGCTTAGAGCGATTTGTTGCTGACCCACAGACTGAAGGTATTGTTCTTATTGGTGAGATA
rJMFF025A18+ TGCTTAGAGCGATTTGTTGCTGACCCACAGACTGAAGGTATTGTTCTTATTGGTGAGATA
rJMFF020C10+ TGCTTAGAGCGATTTGTTGCTGACCCACAGACTGAAGGTATTGTTCTTATTGGTGAGATA
rJMFF002G03+ TGCTTAGAGCGATTTGTTGCTGACCCACAGACTGAAGGTATTGTTCTTATTGGTGAGATA
____________________________________________________________
consensus TGCTTAGAGCGATTTGTTGCTGACCCACAGACTGAAGGTATTGTTCTTATTGGTGAGATA
. : . : . : . : . : . :
rJMSF040K13+ GGTGGTACTGCAGAAGAGGAAGCTGCAGCCTTCATAAAGGAAAGTGGGACTGAGAAGCCT
rJMFF025A18+ GGTGGTACTGCAGAAGAGGAAGCTGCAGCCTTCATAAAGGAAAGTGGGACTGAGAAGCCT
rJMFF020C10+ GGTGGTACTGCAGAAGAGGAAGCTGCAGCCTTCATAAAGGAAAGTGGGACTGAGAAGCCT
rJMFF002G03+ GGTGGTACTGCAGAAGAGGAAGCTGCAGCCTTCATAAAGGAAAGTGGGACTGAGAAGCCT
rJMFF041O09+ CTGCAGCCTTCATAAAGGAAAGTGGGACTGAGAAGCCT
____________________________________________________________
consensus GGTGGTACTGCAGAAGAGGAAGCTGCAGCCTTCATAAAGGAAAGTGGGACTGAGAAGCCT
. : . : . : . : . : . :
rJMSF040K13+ GTTGTTGCTTTTATTGCTGGACTTACTGCCCCACCTGGACGGCGGATGGGTCATGCTGGA
rJMFF025A18+ GTTGTTGCTTTTATTGCTGGACTTACTGCCCCACCTGGACGGCGGATGGGTCATGCTGGA
rJMFF020C10+ GTTGTTGCTTTTATTGCTGGACTTACTGCCCCACCTGGACGGCGGATGGGTCATGCTGGA
rJMFF002G03+ GTTGTTGCTTTTATTGCTGGACTTACTGCCCCACCTGGACGGCGGATGGGTCATGCTGGA
rJMFF041O09+ GTTGTTGCTTTTATTGCTGGACTTACTGCCCCACCTGGACGGCGGATGGGTCATGCTGGA
____________________________________________________________
consensus GTTGTTGCTTTTATTGCTGGACTTACTGCCCCACCTGGACGGCGGATGGGTCATGCTGGA
. : . : . : . : . : . :
rJMSF040K13+ GCTATAGTTTCTGGGGGGAAGGGTACAGCTCAAGACAAAATCAGGACCCTTAAAGAAGCT
rJMFF025A18+ GCTATAGTTTCTGGGGGGAAGGGTACAGCTCAAGACAAAATCAGGACCCTTAAAGAAGCT
rJMFF020C10+ GCTATAGTTTCTGGGGGGAAGGGTACAGCTCAAGACAAAATCAGGACCCTTAAAGAAGCT
rJMFF002G03+ GCTATAGTTTCTGGGGGGAAGGGTACAGCTCAAGACAAAATCAGGACCCTTAAAGAAGCT
rJMFF041O09+ GCTATAGTTTCTGGGGGGAAGGGTACAGCTCAAGACAAAATCAGGACCCTTAAAGAAGCT
____________________________________________________________
consensus GCTATAGTTTCTGGGGGGAAGGGTACAGCTCAAGACAAAATCAGGACCCTTAAAGAAGCT
. : . : . : . : . : . :
rJMSF040K13+ GGTGTAACAGTATGTGAATCTCCAGCAAAACTTGGAACCACAATGCTTGATGTCTTCACA
rJMFF025A18+ GGTGTAACAGTATGTGAATCTCCAGCAAAACTTGGAACCACAATGCTTGATGTCTTCACA
rJMFF020C10+ GGTGTAACAGTATGTGAATCTCCAGCAAAACTTGGAACCACAATGCTTGATGTCTTCACA
rJMFF002G03+ GGTGTAACAGTATGTGAATCTCCAGCAAAACTTGGAACCACAATGCTTGATGTCTTCACA
rJMFF041O09+ GGTGTAACAGTATGTGAATCTCCAGCAAAACTTGGAACCACAATGCTTGATGTCTTCACA
____________________________________________________________
consensus GGTGTAACAGTATGTGAATCTCCAGCAAAACTTGGAACCACAATGCTTGATGTCTTCACA
. : . : . : . : . : . :
rJMSF040K13+ AAGAGGGGTCTTCTGTAAAGCATGAGTGGATATTTTTGGTTCATGAGTTTCTTCTTTTTC
rJMFF025A18+ AAGAGGGGTCTTCTGTAAAGCATGAGTGGATATTTTTGGTTCATGAGTTTCTTCTTTTTC
rJMFF020C10+ AAGAGGGGTCTTCTGTAAAGCATGAGTGGATATTTTTGGTTCATGAGTTTCTTCTTTTTC
rJMFF002G03+ AAGAGGGGTCTTCTGTAAAGCATGAGTGGATATTTTTGGTTCATGAGTTTCTTCTTTTTC
rJMFF041O09+ AAGAGGGGTCTTCTGTAAAGCATGAGTGGATATTTTTGGTTCATGAGTTTCTTCTTTTTC
____________________________________________________________
consensus AAGAGGGGTCTTCTGTAAAGCATGAGTGGATATTTTTGGTTCATGAGTTTCTTCTTTTTC
. : . : . : . : . : . :
rJMSF040K13+ CCCGATTTTATTTCTTTTTGACTTGTGGTATATCCAACCATCATTGAAACGCATTTATCT
rJMFF025A18+ CCCGATTTTATTTCTTTTTGACTTGTGGTATATCCAACCATCATTGAAACGCATTTATCT
rJMFF020C10+ CCCGATTTTATTTCTTTTTGACTTGTGGTATATCCAACCATCATTGAAACGCATTTATCT
rJMFF002G03+ CCCGATTTTATTTCTTTTTGACTTGTGGTATATCCAACCATCATTGAAACGCATTTATCT
rJMFF041O09+ CCCGATTTTATTTCTTTTTGACTTGTGGTATATCCAACCATCATTGAAACGCATTTATCT
____________________________________________________________
consensus CCCGATTTTATTTCTTTTTGACTTGTGGTATATCCAACCATCATTGAAACGCATTTATCT
. : . : . : . : . : . :
rJMSF040K13+ GTTAACAACGTAGATAAATACAAGGCGGCTGTGCTGTTTTCTAGCATTCTTTAAAAGCCT
rJMFF025A18+ GTTAACAACGTAGATAAATACAAGGCGGCTGTGCTGTTTTCTAGCATTCTTTAAAAGCCT
rJMFF020C10+ GTTAACAACGTAGATAAATACAAGGCGGCTGTGCTGTTTTCTAGCATTCTTTAAAAGCCT
rJMFF002G03+ GTTAACAACGTAGATAAATACAAGGCGGCTGTGCTGTTTTCTAGCATTCTTTAAAAGCCT
rJMFF041O09+ GTTAACAACGTAGATAAATACAAGGCGGCTGTGCTGTTTTCTAGCATTCTTTAAAAGCCT
____________________________________________________________
consensus GTTAACAACGTAGATAAATACAAGGCGGCTGTGCTGTTTTCTAGCATTCTTTAAAAGCCT
. : . : . : . : . : . :
rJMSF040K13+ GAAGTGTTTGGTTTTCATAGTGCTTCGACTGTCTACCCTGCTCCCAATCAATGTCCTCTC
rJMFF025A18+ GAAGTGTTTGGTTTTCATAGTGCTTCGACTGTCTACCCTGCTCCCAATCAATGTCCTCTC
rJMFF020C10+ GAAGTGTTTGGTTTTCATAGTGCTTCGACTGTCTACCCTGCTCCCAATCAATGTCCTCTC
rJMFF002G03+ GAAGTGTTTGGTTTTCATAGTGCTTCGACTGTCTACCCTGCTCCCAATCAATGTCCTCTC
rJMFF041O09+ GAAGTGTTTGGTTTTCATAGTGCTTCGACTGTCTACCCTGCTCCCAATCAATGTCCTCTC
____________________________________________________________
consensus GAAGTGTTTGGTTTTCATAGTGCTTCGACTGTCTACCCTGCTCCCAATCAATGTCCTCTC
. : . : . : . : . : . :
rJMSF040K13+ CAGGGGCATTGGTAGCATGCAATTTATTTCGTCCCCCGTTGTAAACAATGACT
rJMFF025A18+ CAGGGGCATTGGTAGCATGCAATTTATTTCGTCCCCCGTTGTAAACAATGACTTGCGTTT
rJMFF020C10+ CAGGGGCATTGGTAGCATGCAATTTATTTCGTCCCCCGTTGTAAACAATGACTTGCGTTT
rJMFF002G03+ CAGGGGCATTGGTAGCATGCAATTTATTTCGTCCCCCGTTGTAAACAATGACTTGCGTTT
rJMFF041O09+ CAGGGGCATTGGTAGCATGCAATTTATTTCGTCCCCCGTTGTAAACAATGACTTGCGTTT
____________________________________________________________
consensus CAGGGGCATTGGTAGCATGCAATTTATTTCGTCCCCCGTTGTAAACAATGACTTGCGTTT
. : . : . : . : . : . :
rJMFF025A18+ TTATTAGCTTCCAATAA
rJMFF020C10+ TTATTAGCTTCCAATAA
rJMFF002G03+ TTATTAGCTTCCAATAA
rJMFF041O09+ TTATTAGCTTCCAATAATGAAAAGAACAGCTTTGTGGAGTAAAAAAAAAAGAAAAAAAAG
____________________________________________________________
consensus TTATTAGCTTCCAATAATGAAAAGAACAGCTTTGTGGAGTAAAAAAAAAAGAAAAAAAAG