clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF040D12 | Sequence | 528 | 002215 (10) | ref|XP_002279933.1| | 1e-07 | PREDICTED: DNA-binding protein S1FA [Vitis vinifera] emb|CBI32704.3| unnamed pro | 505 | 002215 (10) | ref|XP_002279933.1| | 5e-07 | PREDICTED: DNA-binding protein S1FA [Vitis vinifera] emb|CBI32704.3| unnamed pro |
JMFS162B09 | Sequence | 499 | 002215 (10) | ref|XP_002279933.1| | 1e-07 | PREDICTED: DNA-binding protein S1FA [Vitis vinifera] emb|CBI32704.3| unnamed pro | |||||
JMSF021L18 | Sequence | 500 | 002215 (10) | emb|CDP06720.1| | 6e-10 | unnamed protein product [Coffea canephora] | 442 | 002215 (10) | emb|CDP06720.1| | 5e-10 | unnamed protein product [Coffea canephora] |
JMSF037L18 | Sequence | 534 | 002215 (10) | ref|XP_002279933.1| | 1e-07 | PREDICTED: DNA-binding protein S1FA [Vitis vinifera] emb|CBI32704.3| unnamed pro | 476 | 002215 (10) | ref|XP_002279933.1| | 1e-07 | PREDICTED: DNA-binding protein S1FA [Vitis vinifera] emb|CBI32704.3| unnamed pro |
JMSF039L18 | Sequence | 485 | 002215 (10) | ref|XP_002279933.1| | 1e-07 | PREDICTED: DNA-binding protein S1FA [Vitis vinifera] emb|CBI32704.3| unnamed pro | |||||
JMSF046G16 | Sequence | 500 | 002215 (10) | ref|XP_002279933.1| | 1e-07 | PREDICTED: DNA-binding protein S1FA [Vitis vinifera] emb|CBI32704.3| unnamed pro | 450 | 002215 (10) | ref|XP_002279933.1| | 9e-08 | PREDICTED: DNA-binding protein S1FA [Vitis vinifera] emb|CBI32704.3| unnamed pro |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig002215============================================ 535 30 -------------------------------------------------------------------------------------------------->JMFF040D12 <----------------------------------------------------------------------------------------------rJMFF040D12 59 -------------------------------------------------------------------------------------------------->JMSF037L18 <----------------------------------------------------------------------------------------rJMSF037L18 85 ------------------------------------------------------------------------------------------->JMSF046G16 <-----------------------------------------------------------------------------------rJMSF046G16 93 -------------------------------------------------------------------------------------------->JMSF021L18 <----------------------------------------------------------------------------------rJMSF021L18
The following clones don't have the opposite end in this pair.
-------------------------------------------------------------------------------------------->JMFS162B09- <------------------------------------------------------------------------------------------rJMSF039L18-