clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFN004L08 | Sequence | 448 | 000620 (10) | ref|XP_011099736.1| | 4e-55 | PREDICTED: photosystem I reaction center subunit N, chloroplastic [Sesamum indi | |||||
JMFN035I04 | Sequence | 626 | 000620 (10) | ref|XP_004244730.1| | 2e-70 | PREDICTED: photosystem I reaction center subunit N, chloroplastic [Solanum lyco | |||||
JMSF002P16 | Sequence | 194 | 000620 (10) | ref|XP_004244730.1| | 4e-04 | PREDICTED: photosystem I reaction center subunit N, chloroplastic [Solanum lyco | 598 | 000620 (10) | ref|XP_004244730.1| | 1e-70 | PREDICTED: photosystem I reaction center subunit N, chloroplastic [Solanum lyco |
JMSF003C08 | Sequence | 289 | 000620 (10) | ref|XP_004244730.1| | 1e-05 | PREDICTED: photosystem I reaction center subunit N, chloroplastic [Solanum lyco | 659 | 000620 (10) | ref|XP_004244730.1| | 2e-70 | PREDICTED: photosystem I reaction center subunit N, chloroplastic [Solanum lyco |
JMSF008E05 | Sequence | 460 | 000620 (10) | ref|XP_004244730.1| | 6e-31 | PREDICTED: photosystem I reaction center subunit N, chloroplastic [Solanum lyco | 689 | 000620 (10) | ref|XP_004244730.1| | 3e-70 | PREDICTED: photosystem I reaction center subunit N, chloroplastic [Solanum lyco |
JMSF042A06 | Sequence | 675 | 000620 (10) | ref|XP_004244730.1| | 3e-70 | PREDICTED: photosystem I reaction center subunit N, chloroplastic [Solanum lyco | 626 | 000620 (10) | ref|XP_004244730.1| | 2e-70 | PREDICTED: photosystem I reaction center subunit N, chloroplastic [Solanum lyco |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig000620============================================ 696 7 ----------------------------------------------------------------->JMSF008E05 <--------------------------------------------------------------------------------------------------rJMSF008E05 38 ----------------------------------------->JMSF003C08 <----------------------------------------------------------------------------------------------rJMSF003C08 79 --------------------------------------------------------------------------------->JMSF042A06 <----------------------------------------------------------------------------------------rJMSF042A06 98 --------------------------->JMSF002P16 <-------------------------------------------------------------------------------------rJMSF002P16
The following clones don't have the opposite end in this pair.
----------------------------------------------------------------------------------------->JMFN035I04- -------------------------------------------------->JMFN004L08-