clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF019F13 | Sequence | 574 | 000886 (9) | ref|XP_009621404.1| | 236 | PREDICTED: PHD finger protein ALFIN-LIKE 4-like [Nicotiana tomentosiformis] | 737 | 000886 (9) | ref|XP_011093779.1| | 224 | PREDICTED: PHD finger protein ALFIN-LIKE 4-like [Sesamum indicum] |
JMFF046M19 | Sequence | 611 | 000886 (9) | ref|XP_009621404.1| | 235 | PREDICTED: PHD finger protein ALFIN-LIKE 4-like [Nicotiana tomentosiformis] | 600 | 000886 (9) | ref|XP_011093779.1| | 127 | PREDICTED: PHD finger protein ALFIN-LIKE 4-like [Sesamum indicum] |
JMFN029J12 | Sequence | 590 | 000886 (9) | ref|XP_011093779.1| | 130 | PREDICTED: PHD finger protein ALFIN-LIKE 4-like [Sesamum indicum] | |||||
JMSF005N23 | Sequence | 372 | 000886 (9) | ref|XP_009621404.1| | 154 | PREDICTED: PHD finger protein ALFIN-LIKE 4-like [Nicotiana tomentosiformis] | 353 | 000886 (9) | ref|XP_007012378.1| | 7e-18 | Pentatricopeptide repeat superfamily protein, putative [Theobroma cacao] gb|EOY |
JMSF038A17 | Sequence | 619 | 000886 (9) | ref|XP_009621404.1| | 235 | PREDICTED: PHD finger protein ALFIN-LIKE 4-like [Nicotiana tomentosiformis] | 889 | 000886 (9) | ref|XP_006582918.1| | 4e-86 | PREDICTED: uncharacterized protein LOC100794662 isoform X3 [Glycine max] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig000886============================================1116 55 ------------------------------------------------------->JMSF038A17 <-----------------------------------------------------------------------------rJMSF038A17 84 --------------------------------------------------->JMFF019F13 <----------------------------------------------------------------rJMFF019F13 96 ---------------------------------------------->JMFF046M19 <-----------------------------------------------------rJMFF046M19 302 -------------------------------->JMSF005N23 <---------rJMSF005N23
The following clones don't have the opposite end in this pair.
---------------------------------------------------->JMFN029J12-