clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF001A10 | Sequence | 569 | 012459 (10) | ref|XP_009613603.1| | 6e-80 | PREDICTED: microsomal glutathione S-transferase 3 [Nicotiana tomentosiformis] | 646 | 012459 (10) | ref|XP_009613603.1| | 6e-78 | PREDICTED: microsomal glutathione S-transferase 3 [Nicotiana tomentosiformis] |
JMFF016P18 | Sequence | 611 | 012459 (10) | ref|XP_009613603.1| | 8e-80 | PREDICTED: microsomal glutathione S-transferase 3 [Nicotiana tomentosiformis] | 648 | 012459 (10) | ref|XP_009613603.1| | 1e-77 | PREDICTED: microsomal glutathione S-transferase 3 [Nicotiana tomentosiformis] |
JMFF047K14 | Sequence | 464 | 012459 (10) | ref|XP_009613603.1| | 1e-80 | PREDICTED: microsomal glutathione S-transferase 3 [Nicotiana tomentosiformis] | 363 | 012459 (10) | gb|KJB10498.1| | 1e-08 | hypothetical protein B456_001G204400 [Gossypium raimondii] |
JMFN018I21 | Sequence | 597 | 012459 (10) | ref|XP_009613603.1| | 1e-79 | PREDICTED: microsomal glutathione S-transferase 3 [Nicotiana tomentosiformis] | |||||
JMSF040K18 | Sequence | 640 | 012459 (10) | ref|XP_009613603.1| | 3e-79 | PREDICTED: microsomal glutathione S-transferase 3 [Nicotiana tomentosiformis] | 729 | 012459 (10) | ref|XP_009613603.1| | 8e-79 | PREDICTED: microsomal glutathione S-transferase 3 [Nicotiana tomentosiformis] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig012459============================================ 802 73 ------------------------------------------------------------------------------->JMSF040K18 <------------------------------------------------------------------------------------------rJMSF040K18 93 --------------------------------------------------------->JMFF047K14 <--------------------------------------------rJMFF047K14 153 --------------------------------------------------------------------------->JMFF016P18 <--------------------------------------------------------------------------------rJMFF016P18 181 ---------------------------------------------------------------------->JMFF001A10 <--------------------------------------------------------------------------rJMFF001A10
The following clones don't have the opposite end in this pair.
-------------------------------------------------------------------------->JMFN018I21- <----------------------------------------------------------------------------------rJMSF030I11*