clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF001A10 | Sequence | 569 | 012459 (10) | ref|XP_009613603.1| | 6e-80 | PREDICTED: microsomal glutathione S-transferase 3 [Nicotiana tomentosiformis] | 646 | 012459 (10) | ref|XP_009613603.1| | 6e-78 | PREDICTED: microsomal glutathione S-transferase 3 [Nicotiana tomentosiformis] |
JMFF016P18 | Sequence | 611 | 012459 (10) | ref|XP_009613603.1| | 8e-80 | PREDICTED: microsomal glutathione S-transferase 3 [Nicotiana tomentosiformis] | 648 | 012459 (10) | ref|XP_009613603.1| | 1e-77 | PREDICTED: microsomal glutathione S-transferase 3 [Nicotiana tomentosiformis] |
JMFF047K14 | Sequence | 464 | 012459 (10) | ref|XP_009613603.1| | 1e-80 | PREDICTED: microsomal glutathione S-transferase 3 [Nicotiana tomentosiformis] | 363 | 012459 (10) | gb|KJB10498.1| | 1e-08 | hypothetical protein B456_001G204400 [Gossypium raimondii] |
JMFN018I21 | Sequence | 597 | 012459 (10) | ref|XP_009613603.1| | 1e-79 | PREDICTED: microsomal glutathione S-transferase 3 [Nicotiana tomentosiformis] | |||||
JMSF030I11 | Sequence | 404 | 013310 (7) | ref|XP_011074054.1| | 2e-68 | PREDICTED: pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alp | 664 | 012459 (10) | ref|XP_009613603.1| | 4e-79 | PREDICTED: microsomal glutathione S-transferase 3 [Nicotiana tomentosiformis] |
JMSF040K18 | Sequence | 640 | 012459 (10) | ref|XP_009613603.1| | 3e-79 | PREDICTED: microsomal glutathione S-transferase 3 [Nicotiana tomentosiformis] | 729 | 012459 (10) | ref|XP_009613603.1| | 8e-79 | PREDICTED: microsomal glutathione S-transferase 3 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMSF040K18- GGAGCTATACTTTCCTAATGGC
rJMSF040K18+ GGAGCTATACTTTCCTAATGGC
____________________________________________________________
consensus GGAGCTATACTTTCCTAATGGC
. : . : . : . : . : . :
JMSF040K18- ATCTAGTTATCCAAACCCAAACAATCCACAGCTACCCTCCTAATCTAGAAGAATAAGCAT
rJMSF040K18+ ATCTAGTTATCCAAACCCAAACAATCCACAGCTACCCTCCTAATCTAGAAGAATAAGCAT
rJMSF030I11+ TAGAAGAATAAGCAT
____________________________________________________________
consensus ATCTAGTTATCCAAACCCAAACAATCCACAGCTACCCTCCTAATCTAGAAGAATAAGCAT
. : . : . : . : . : . :
JMSF040K18- ACAGAATCATCAAAATCAAACCCAGAAAGAAAACCGCCATGG-CCGGAGTGGAGATACTG
JMFF001A10- AGAAAGAAAACCGCCATGG-CCGGAGTGGAGATACTG
JMFF047K14- AAAATCAAACCCAGAAAGAAAACCGCCATGG-CCGGAGTGGAGATACTG
rJMSF040K18+ ACAGAATCATCAAAATCAAACCCAGAAAGAAAACCGCCATGG-CCGGAGTGGAGATACTG
JMFF016P18- AAAATCAAACCCAGAAAGAAAACCGCCATGG-CCGGAGTGGAGATACTG
JMFN018I21- AAACCGCCATGG-CCGGAGTGGAGATACTG
rJMFF001A10+ CCGGAGTGGAGATACTG
rJMSF030I11+ ACAGAATCATCAAAATCAAACCCAGAAAGAAAACCGCCATGG-CCGGAGTGGAGATACTG
rJMFF016P18+ AAAATCAAACCCAGAAAGAAAACCGCCATGGCCCGGAGTGGAGATACTG
____________________________________________________________
consensus ACAGAATCATCAAAATCAAACCCAGAAAGAAAACCGCCATGG-CCGGAGTGGAGATACTG
. : . : . : . : . : . :
JMSF040K18- CCCAAAGAGTATGGATACGTGGTCATCGTTCTCGTCCTCTACTGTTTCCTCAACCTCTGG
JMFF001A10- CCCAAAGAGTATGGATACGTGGTCATCGTTCTCGTCCTCTACTGTTTCCTCAACCTCTGG
JMFF047K14- CCCAAAGAGTATGGATACGTGGTCATCGTTCTCGTCCTCTACTGTTTCCTCAACCTCTGG
rJMSF040K18+ CCCAAAGAGTATGGATACGTGGTCATCGTTCTCGTCCTCTACTGTTTCCTCAACCTCTGG
JMFF016P18- CCCAAAGAGTATGGATACGTGGTCATCGTTCTCGTCCTCTACTGTTTCCTCAACCTCTGG
JMFN018I21- CCCAAAGAGTATGGATACGTGGTCATCGTTCTCGTCCTCTACTGTTTCCTCAACCTCTGG
rJMFF001A10+ CCCAAAGAGTATGGATACGTGGTCATCGTTCTCGTCCTCTACTGTTTCCTCAACCTCTGG
rJMSF030I11+ CCCAAAGAGTATGGATACGTGGTCATCGTTCTCGTCCTCTACTGTTTCCTCAACCTCTGG
rJMFF016P18+ CCCAAAGAGTATGGATACGTGGTCATCGTTCTCGTCCTCTACTGTTTCCTCAACCTCTGG
____________________________________________________________
consensus CCCAAAGAGTATGGATACGTGGTCATCGTTCTCGTCCTCTACTGTTTCCTCAACCTCTGG
. : . : . : . : . : . :
JMSF040K18- ATGGGTTTCCAAGTTGGCACAGCTCGCAAGAAGTATAAGGTTCCCTATCCTACCATGTAT
JMFF001A10- ATGGGTTTCCAAGTTGGCACAGCTCGCAAGAAGTATAAGGTTCCCTATCCTACCATGTAT
JMFF047K14- ATGGGTTTCCAAGTTGGCACAGCTCGCAAGAAGTATAAGGTTCCCTATCCTACCATGTAT
rJMSF040K18+ ATGGGTTTCCAAGTTGGCACAGCTCGCAAGAAGTATAAGGTTCCCTATCCTACCATGTAT
JMFF016P18- ATGGGTTTCCAAGTTGGCACAGCTCGCAAGAAGTATAAGGTTCCCTATCCTACCATGTAT
JMFN018I21- ATGGGTTTCCAAGTTGGCACAGCTCGCAAGAAGTATAAGGTTCCCTATCCTACCATGTAT
rJMFF001A10+ ATGGGTTTCCAAGTTGGCACAGCTCGCAAGAAGTATAAGGTTCCCTATCCTACCATGTAT
rJMSF030I11+ ATGGGTTTCCAAGTTGGCACAGCTCGCAAGAAGTATAAGGTTCCCTATCCTACCATGTAT
rJMFF016P18+ ATGGGTTTCCAAGTTGGCACAGCTCGCAAGAAGTATAAGGTTCCCTATCCTACCATGTAT
____________________________________________________________
consensus ATGGGTTTCCAAGTTGGCACAGCTCGCAAGAAGTATAAGGTTCCCTATCCTACCATGTAT
. : . : . : . : . : . :
JMSF040K18- GCAATAGAAGCTGAAAACAAGGATGCTAAGCTCTTCAACTGCGTTCAGAGAGGACATCAG
JMFF001A10- GCAATAGAAGCTGAAAACAAGGATGCTAAGCTCTTCAACTGCGTTCAGAGAGGACATCAG
JMFF047K14- GCAATAGAAGCTGAAAACAAGGATGCTAAGCTCTTCAACTGCGTTCAGAGAGGACATCAG
rJMSF040K18+ GCAATAGAAGCTGAAAACAAGGATGCTAAGCTCTTCAACTGCGTTCAGAGAGGACATCAG
JMFF016P18- GCAATAGAAGCTGAAAACAAGGATGCTAAGCTCTTCAACTGCGTTCAGAGAGGACATCAG
JMFN018I21- GCAATAGAAGCTGAAAACAAGGATGCTAAGCTCTTCAACTGCGTTCAGAGAGGACATCAG
rJMFF001A10+ GCAATAGAAGCTGAAAACAAGGATGCTAAGCTCTTCAACTGCGTTCAGAGAGGACATCAG
rJMSF030I11+ GCAATAGAAGCTGAAAACAAGGATGCTAAGCTCTTCAACTGCGTTCAGAGAGGACATCAG
rJMFF016P18+ GCAATAGAAGCTGAAAACAAGGATGCTAAGCTCTTCAACTGCGTTCAGAGAGGACATCAG
____________________________________________________________
consensus GCAATAGAAGCTGAAAACAAGGATGCTAAGCTCTTCAACTGCGTTCAGAGAGGACATCAG
. : . : . : . : . : . :
JMSF040K18- AATTCACTGGAAAATATGCCTGTATTTTTCATGCTGATGATATTGGGAGGAATTAGGCAC
JMFF001A10- AATTCACTGGAAAATATGCCTGTATTTTTCATGCTGATGATATTGGGAGGAATTAGGCAC
JMFF047K14- AATTCACTGGAAAATATGCCTGTATTTTTCATGCTGATGATATTGGGAGGAATTAGGCAC
rJMSF040K18+ AATTCACTGGAAAATATGCCTGTATTTTTCATGCTGATGATATTGGGAGGAATTAGGCAC
JMFF016P18- AATTCACTGGAAAATATGCCTGTATTTTTCATGCTGATGATATTGGGAGGAATTAGGCAC
JMFN018I21- AATTCACTGGAAAATATGCCTGTATTTTTCATGCTGATGATATTGGGAGGAATTAGGCAC
rJMFF001A10+ AATTCACTGGAAAATATGCCTGTATTTTTCATGCTGATGATATTGGGAGGAATTAGGCAC
rJMSF030I11+ AATTCACTGGAAAATATGCCTGTATTTTTCATGCTGATGATATTGGGAGGAATTAGGCAC
rJMFF016P18+ AATTCACTGGAAAATATGCCTGTATTTTTCATGCTGATGATATTGGGAGGAATTAGGCAC
____________________________________________________________
consensus AATTCACTGGAAAATATGCCTGTATTTTTCATGCTGATGATATTGGGAGGAATTAGGCAC
. : . : . : . : . : . :
JMSF040K18- CCTTTGATTTCTGCATCCTTAGGAGCCATATACATTGTTTCTCGGTATGGCTATTTCACT
JMFF001A10- CCTTTGATTTCTGCATCCTTAGGAGCCATATACATTGTTTCTCGGTATGGCTATTTCACT
JMFF047K14- CCTTTGATTTCTGCATCCTTAGGAGCCATATACATTGTTTCTCGGTATGGCTATTTCACT
rJMSF040K18+ CCTTTGATTTCTGCATCCTTAGGAGCCATATACATTGTTTCTCGGTATGGCTATTTCACT
JMFF016P18- CCTTTGATTTCTGCATCCTTAGGAGCCATATACATTGTTTCTCGGTATGGCTATTTCACT
JMFN018I21- CCTTTGATTTCTGCATCCTTAGGAGCCATATACATTGTTTCTCGGTATGGCTATTTCACT
rJMFF001A10+ CCTTTGATTTCTGCATCCTTAGGAGCCATATACATTGTTTCTCGGTATGGCTATTTCACT
rJMSF030I11+ CCTTTGATTTCTGCATCCTTAGGAGCCATATACATTGTTTCTCGGTATGGCTATTTCACT
rJMFF016P18+ CCTTTGATTTCTGCATCCTTAGGAGCCATATACATTGTTTCTCGGTATGGCTATTTCACT
rJMFF047K14+ CACT
____________________________________________________________
consensus CCTTTGATTTCTGCATCCTTAGGAGCCATATACATTGTTTCTCGGTATGGCTATTTCACT
. : . : . : . : . : . :
JMSF040K18- GGTTATGCCACTGGTGATCCTACAAAGCGCTATACTCTTGGGAAATATGGTTTCATTGCA
JMFF001A10- GGTTATGCCACTGGTGATCCTACAAAGCGCTATACTCTTGGGAAATATGGTTTCATTGCA
JMFF047K14- GGTTATGCCACTGGTGATCCTACNAAGCGCTATACTCTTGGGAAATATGGTTTCATTGCA
rJMSF040K18+ GGTTATGCCACTGGTGATCCTACAAAGCGCTATACTCTTGGGAAATATGGTTTCATTGCA
JMFF016P18- GGTTATGCCACTGGTGATCCTACAAAGCGCTATACTCTTGGGAAATATGGTTTCATTGCA
JMFN018I21- GGTTATGCCACTGGTGATCCTACAAAGCGCTATACTCTTGGGAAATATGGTTTCATTGCA
rJMFF001A10+ GGTTATGCCACTGGTGATCCTACAAAGCGCTATACTCTTGGGAAATATGGTTTCATTGCA
rJMSF030I11+ GGTTATGCCACTGGTGATCCTACAAAGCGCTATACTCTTGGGAAATATGGTTTCATTGCA
rJMFF016P18+ GGTTATGCCACTGGTGATCCTACAAAGCGCTATACTCTTGGGAAATATGGTTTCATTGCA
rJMFF047K14+ GGTTATGCCACTGGTGATCCTACAAAGCGCTATACTCTTGGGAAATATGGTTTCATTGCA
____________________________________________________________
consensus GGTTATGCCACTGGTGATCCTACAAAGCGCTATACTCTTGGGAAATATGGTTTCATTGCA
. : . : . : . : . : . :
JMSF040K18- ATTTTTGGTCTTCAGATTTGTGCAATATCCTGTGCAATTAAGCTTCTAACATCATGAACT
JMFF001A10- ATTTTTGGTCTTCAGATTTGTGCAATATCCTGTGCAATTAAGCTTCTAACATCATGAACT
JMFF047K14- ATTTTTGGTCTTCAGATTTGTGCAATATCCTGTGCAATTAAGCTTCTAACATCATG
rJMSF040K18+ ATTTTTGGTCTTCAGATTTGTGCAATATCCTGTGCAATTAAGCTTCTAACATCATGAACT
JMFF016P18- ATTTTTGGTCTTCAGATTTGTGCAATATCCTGTGCAATTAAGCTTCTAACATCATGAACT
JMFN018I21- ATTTTTGGTCTTCAGATTTGTGCAATATCCTGTGCAATTAAGCTTCTAACATCATGAACT
rJMFF001A10+ ATTTTTGGTCTTCAGATTTGTGCAATATCCTGTGCAATTAAGCTTCTAACATCATGAACT
rJMSF030I11+ ATTTTTGGTCTTCAGATTTGTGCAATATCCTGTGCAATTAAGCTTCTAACATCATGAACT
rJMFF016P18+ ATTTTTGGTCTTCAGATTTGTGCAATATCCTGTGCAATTAAGCTTCTAACATCATGAACT
rJMFF047K14+ ATTTTTGGTCTTCAGATTTGTGCAATATCCTGTGCAATTAAGCTTCTAACATCATGAACT
____________________________________________________________
consensus ATTTTTGGTCTTCAGATTTGTGCAATATCCTGTGCAATTAAGCTTCTAACATCATGAACT
. : . : . : . : . : . :
JMSF040K18- AGAAGATGCTGCTTGGTAGTTGTCTCTTATATTTGCCTAGACAAATCCATTGTTTTTGGA
JMFF001A10- AGAAGATGCTGCTTGGTAGTTGTCTCTTATATTTGCCTAGACAAATCCATTGTTTTTGGA
rJMSF040K18+ AGAAGATGCTGCTTGGTAGTTGTCTCTTATATTTGCCTAGACAAATCCATTGTTTTTGGA
JMFF016P18- AGAAGATGCTGCTTGGTAGTTGTCTCTTATATTTGCCTAGACAAATCCATTGTTTTTGGA
JMFN018I21- AGAAGATGCTGCTTGGTAGTTGTCTCTTATATTTGCCTAGACAAATCCATTGTTTTTGGA
rJMFF001A10+ AGAAGATGCTGCTTGGTAGTTGTCTCTTATATTTGCCTAGACAAATCCATTGTTTTTGGA
rJMSF030I11+ AGAAGATGCTGCTTGGTAGTTGTCTCTTATATTTGCCTAGACAAATCCATTGTTTTTGGA
rJMFF016P18+ AGAAGATGCTGCTTGGTAGTTGTCTCTTATATTTGCCTAGACAAATCCATTGTTTTTGGA
rJMFF047K14+ AGAAGATGCTGCTTGGTAGTTGTCTCTTATATTTGCCTAGACAAATCCATTGTTTTTGGA
____________________________________________________________
consensus AGAAGATGCTGCTTGGTAGTTGTCTCTTATATTTGCCTAGACAAATCCATTGTTTTTGGA
. : . : . : . : . : . :
JMSF040K18- ATATAGTTCTCTGCGTAAT
JMFF001A10- ATATAGTTCTCTGCGTAATAGTTGTGCTGTGGTTATGTTATTTTAACCTTTA
rJMSF040K18+ ATATAGTTCTCTGCGTAATAGTTGTGCTGTGGTTATGTTATTTTAACCTTTAAANCGAGG
JMFF016P18- ATATAGTTCTCTGCGTAATAGTTGTGCTGTGGTTATGTTATTTTAACCTTTAAA-CGANG
JMFN018I21- ATATAGTTCTCTGCGTAATAGTTGTGCTGTGGTTATGTTATTTTAACCTTTAAA-CGAGG
rJMFF001A10+ ATATAGTTCTCTGCGTAATAGTTGTGCTGTGGTTATGTTATTTTAACCTTTAAA-CGAGG
rJMSF030I11+ ATATAGTTCTCTGCGTAATAGTTGTGCTGTGGTTATGTTATTTTAACCTTTAAA-CGAGG
rJMFF016P18+ ATATAGTTCTCTGCGTAATAGTTGTGCTGTGGTTATGTTATTTTAACCTTTAAA-CGAGG
rJMFF047K14+ ATATAGTTCTCTGCGTAATAGTTGTGCTGTGGTTATGTTATTTTAACCTTTAAA-CGAGG
____________________________________________________________
consensus ATATAGTTCTCTGCGTAATAGTTGTGCTGTGGTTATGTTATTTTAACCTTTAAA-CGAGG
. : . : . : . : . : . :
rJMSF040K18+ CGCTGCCTTAACTGTTGTCATGTAGAAACTTTGCCAACCATATGGTTT
JMFF016P18- CGCTGCCTTAACTGTTGTCATGTA
JMFN018I21- CGCTGCCTTAACTGTTGTCATGTAGAAAC
rJMFF001A10+ CTCTGCCTTAACTGTTGTCATGTAGAAACTTTGCCAACCATATG
rJMSF030I11+ CGCTGCCTTAACTGTTGTCATGTAGAAACTTTGCCAACCATATGGTTT
rJMFF016P18+ CGCTGCCTTAACTGTTGTCATGTAGAAACTTTGCCAACCATATGGTTTTGTTTTTGGATA
rJMFF047K14+ CGCTGCCTTAACTGTTGTCATGTAGAAACTTTGCCAACCATATGGTTTTGTTTTTGGATA
____________________________________________________________
consensus CGCTGCCTTAACTGTTGTCATGTAGAAACTTTGCCAACCATATGGTTTTGTTTTTGGATA
. : . : . : . : . : . :
rJMFF047K14+ TGACTGCAATAAAATGTATTAATGTTTGCATACAAAAAAAAAAAAAAAACTCTCCAGGGT
____________________________________________________________
consensus TGACTGCAATAAAATGTATTAATGTTTGCATACAAAAAAAAAAAAAAAACTCTCCAGGGT