clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF003O19 | Sequence | 543 | 013866 (19) | ref|XP_009630249.1| | 127 | PREDICTED: uncharacterized protein LOC104120218 [Nicotiana tomentosiformis] | 494 | 013866 (19) | ref|XP_009771511.1| | 3e-92 | PREDICTED: 3'-5' exoribonuclease 1-like [Nicotiana sylvestris] |
JMFF013B01 | Sequence | 633 | 013866 (19) | emb|CDP12566.1| | 2e-102 | unnamed protein product [Coffea canephora] | |||||
JMFF024H14 | Sequence | 476 | 013866 (19) | ref|XP_009771511.1| | 3e-09 | PREDICTED: 3'-5' exoribonuclease 1-like [Nicotiana sylvestris] | 669 | 013866 (19) | emb|CDP12566.1| | 1e-113 | unnamed protein product [Coffea canephora] |
JMFF026P01 | Sequence | 537 | 013866 (19) | ref|XP_009630249.1| | 126 | PREDICTED: uncharacterized protein LOC104120218 [Nicotiana tomentosiformis] | 471 | 013866 (19) | ref|XP_009771511.1| | 9e-87 | PREDICTED: 3'-5' exoribonuclease 1-like [Nicotiana sylvestris] |
JMFF045P08 | Sequence | 534 | 013866 (19) | ref|XP_009771511.1| | 2e-22 | PREDICTED: 3'-5' exoribonuclease 1-like [Nicotiana sylvestris] | 388 | 013866 (19) | emb|CBI35099.3| | 3e-11 | unnamed protein product [Vitis vinifera] |
JMFF051H18 | Sequence | 596 | 013866 (19) | ref|XP_009630249.1| | 123 | PREDICTED: uncharacterized protein LOC104120218 [Nicotiana tomentosiformis] | 382 | 013866 (19) | emb|CDP12566.1| | 3e-39 | unnamed protein product [Coffea canephora] |
JMSF016O05 | Sequence | 437 | 013866 (19) | ref|XP_009771511.1| | 4e-22 | PREDICTED: 3'-5' exoribonuclease 1-like [Nicotiana sylvestris] | 790 | 013866 (19) | emb|CDP12566.1| | 7e-147 | unnamed protein product [Coffea canephora] |
JMSF017O05 | Sequence | 372 | 013866 (19) | ref|XP_009771511.1| | 6e-12 | PREDICTED: 3'-5' exoribonuclease 1-like [Nicotiana sylvestris] | 243 | 013866 (19) | emb|CDP12566.1| | 9e-24 | unnamed protein product [Coffea canephora] |
JMSF038I19 | Sequence | 657 | 013866 (19) | ref|XP_009771511.1| | 1e-36 | PREDICTED: 3'-5' exoribonuclease 1-like [Nicotiana sylvestris] | 886 | 013866 (19) | emb|CDP12566.1| | 1e-143 | unnamed protein product [Coffea canephora] |
JMSF042D03 | Sequence | 787 | 013866 (19) | ref|XP_009630249.1| | 265 | PREDICTED: uncharacterized protein LOC104120218 [Nicotiana tomentosiformis] | 792 | 013866 (19) | emb|CDP12566.1| | 1e-147 | unnamed protein product [Coffea canephora] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig013866============================================1631 24 ---------------------------->JMFF024H14 <----------------------------------------rJMFF024H14 86 ------------------------------------>JMFF051H18 <-----------------------rJMFF051H18 153 -------------------------------->JMFF045P08 <--------------------rJMFF045P08 161 ----------------------------------------------->JMSF042D03 <-----------------------------------------------rJMSF042D03 161 --------------------------------------->JMSF038I19 <-----------------------------------------------------rJMSF038I19 194 -------------------------->JMSF016O05 <-----------------------------------------------rJMSF016O05 200 ---------------------->JMSF017O05 <-------------rJMSF017O05 424 -------------------------------->JMFF026P01 <---------------------------rJMFF026P01 426 -------------------------------->JMFF003O19 <-----------------------------rJMFF003O19
The following clones don't have the opposite end in this pair.
<-------------------------------------rJMFF013B01-