clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF003O19 | Sequence | 543 | 013866 (19) | ref|XP_009630249.1| | 127 | PREDICTED: uncharacterized protein LOC104120218 [Nicotiana tomentosiformis] | 494 | 013866 (19) | ref|XP_009771511.1| | 3e-92 | PREDICTED: 3'-5' exoribonuclease 1-like [Nicotiana sylvestris] |
JMFF013B01 | Sequence | 633 | 013866 (19) | emb|CDP12566.1| | 2e-102 | unnamed protein product [Coffea canephora] | |||||
JMFF024H14 | Sequence | 476 | 013866 (19) | ref|XP_009771511.1| | 3e-09 | PREDICTED: 3'-5' exoribonuclease 1-like [Nicotiana sylvestris] | 669 | 013866 (19) | emb|CDP12566.1| | 1e-113 | unnamed protein product [Coffea canephora] |
JMFF026P01 | Sequence | 537 | 013866 (19) | ref|XP_009630249.1| | 126 | PREDICTED: uncharacterized protein LOC104120218 [Nicotiana tomentosiformis] | 471 | 013866 (19) | ref|XP_009771511.1| | 9e-87 | PREDICTED: 3'-5' exoribonuclease 1-like [Nicotiana sylvestris] |
JMFF045P08 | Sequence | 534 | 013866 (19) | ref|XP_009771511.1| | 2e-22 | PREDICTED: 3'-5' exoribonuclease 1-like [Nicotiana sylvestris] | 388 | 013866 (19) | emb|CBI35099.3| | 3e-11 | unnamed protein product [Vitis vinifera] |
JMFF051H18 | Sequence | 596 | 013866 (19) | ref|XP_009630249.1| | 123 | PREDICTED: uncharacterized protein LOC104120218 [Nicotiana tomentosiformis] | 382 | 013866 (19) | emb|CDP12566.1| | 3e-39 | unnamed protein product [Coffea canephora] |
JMSF016O05 | Sequence | 437 | 013866 (19) | ref|XP_009771511.1| | 4e-22 | PREDICTED: 3'-5' exoribonuclease 1-like [Nicotiana sylvestris] | 790 | 013866 (19) | emb|CDP12566.1| | 7e-147 | unnamed protein product [Coffea canephora] |
JMSF017O05 | Sequence | 372 | 013866 (19) | ref|XP_009771511.1| | 6e-12 | PREDICTED: 3'-5' exoribonuclease 1-like [Nicotiana sylvestris] | 243 | 013866 (19) | emb|CDP12566.1| | 9e-24 | unnamed protein product [Coffea canephora] |
JMSF038I19 | Sequence | 657 | 013866 (19) | ref|XP_009771511.1| | 1e-36 | PREDICTED: 3'-5' exoribonuclease 1-like [Nicotiana sylvestris] | 886 | 013866 (19) | emb|CDP12566.1| | 1e-143 | unnamed protein product [Coffea canephora] |
JMSF042D03 | Sequence | 787 | 013866 (19) | ref|XP_009630249.1| | 265 | PREDICTED: uncharacterized protein LOC104120218 [Nicotiana tomentosiformis] | 792 | 013866 (19) | emb|CDP12566.1| | 1e-147 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
JMFF024H14- ATTATAAAGAA
____________________________________________________________
consensus ATTATAAAGAA
. : . : . : . : . : . :
JMFF024H14- ACAACAAAAAAAGAGAGATCCAGATATTGGGTAATCATATTCCCTAATATCTCATACGAT
____________________________________________________________
consensus ACAACAAAAAAAGAGAGATCCAGATATTGGGTAATCATATTCCCTAATATCTCATACGAT
. : . : . : . : . : . :
JMFF024H14- TCGAAAACAAGATTTATTTATAGTAAAAAAGTAAAATCATACGGAGTATAGATAATTGTA
JMFF045P08- AATCATACCGAGTATATATAATTGTA
JMFF051H18- ATTTATAGTAAAAAAGTAAAATCATACGGAGTATAAATAATTGTA
JMSF038I19- ATAATTGTA
JMSF042D03- ATAATTGTA
____________________________________________________________
consensus TCGAAAACAAGATTTATTTATAGTAAAAAAGTAAAATCATACGGAGTATATATAATTGTA
. : . : . : . : . : . :
JMFF024H14- AATTCTTGCTGCAAAATCTCTCAACCTACTCTTCCCCACTGCTCCGTGTCTAGATCAATC
JMFF045P08- AATTCTTGCTGCGGAATCTCTCAACCTACTCTTCCCCACTGCTCCGTGTGTAGATCAATC
JMSF016O05- CCTACTCTTCCCCACTGCTCCGTGTCTAGATCAATC
JMSF017O05- CCTACTCTTCCCCACTGCTCCGTGTCTAGATCAATC
JMFF051H18- AATTCTTGCTGCAAAATCTCTCAACCTACTCTTCCCCACTGCTCCGTGTCTAGATCAATC
JMSF038I19- AATTCTTGCTGCAAAATCTCTCAACCTACTCTTCCCCACTGCTCCGTGTCTAGATCAATC
JMFF003O19- AACCTACTCTTCCCCACTGCTCCGTGTCTAGATCAATC
JMFF026P01- AACCTACTCTTCCCCACTGCTCCGTGTCTAGATCAATC
JMSF042D03- AATTCTTGCTGCAAAATCTCTCAACCTACTCTTCCCCACTGCTCCGTGTCTAGATCAATC
____________________________________________________________
consensus AATTCTTGCTGCAAAATCTCTCAACCTACTCTTCCCCACTGCTCCGTGTCTAGATCAATC
. : . : . : . : . : . :
JMFF024H14- ACCCAACCAGAGACTGAGAGAGAGAGAGTTAATGCGGAGGAAGCTTAAAGCGAGGAAATC
JMFF045P08- ACCCAACCAGAGACTGAGATACACAGAGTTAATGCGGAGGAAGCTTAAAGCGAGGAAATC
JMSF016O05- ACCCAACCAGAGACTGAGAGAGAGAGAGTTAATGCGGAGGAAGCTTAAAGCGAGGAAATC
JMSF017O05- ACCCANCCAGAGACTGAGAGAGAGAGAGTTANTGCGGAGGAAGCTTAAAGCGAGGAAATC
JMFF051H18- ACCCAACCAGAGACTGAGAGAGAGAGAGTTAATGCGGAGGAAGCTTAAAGCGAGGAAATC
JMSF038I19- ACCCAACCAGAGACTGAGAGAGAGAGAGTTAATGCGGAGGAAGCTTAAAGCGAGGAAATC
JMFF003O19- ACCCAACCAGAGACTGAGAGAGAGAGAGTTAATGCGGAGGAAGCTTAAAGCGAGGAAATC
JMFF026P01- ACCCAACCAGAGACTGAGAGAGAGAGAGTTAATGCGGAGGAAGCTTAAAGCGAGGAAATC
JMSF042D03- ACCCAACCAGAGACTGAGAGAGAGAGAGTTAATGCGGAGGAAGCTTAAAGCGAGGAAATC
____________________________________________________________
consensus ACCCAACCAGAGACTGAGAGAGAGAGAGTTAATGCGGAGGAAGCTTAAAGCGAGGAAATC
. : . : . : . : . : . :
JMFF024H14- TGATGTACTTGCTTCTGAATCTTTGCTACATTCAGCAACACCATGATGGAATTAGAACAT
JMFF045P08- TGATGTACTTGCTTCTGAATCTTTGCTACATTCAGCAGCACCATGATGGAGTTATAACAT
JMSF016O05- TGATGTACTTGCTTCTGAATCTTTGCTACATTCAGCAACACCATGATGGAATTAGAACAT
JMSF017O05- TGATGTACTTGCTTCTGAATCTTTGCTACATTCAGCAACACCATGATGGAATTAGAACAT
JMFF051H18- TGATGTACTTGCTTCTGAATCTTTGCTACATTCAGCAACACCATGATGGAATTAGAACAT
JMSF038I19- TGATGTACTTGCTTCTGAATCTTTGCTACATTCAGCAACACCATGATGGAATTAGAACAT
JMFF003O19- TGATGTACTTGCTTCTGAATCTTTGCTACATTCAGCAACACCATGATGGAATTAGAACAT
JMFF026P01- TGATGTACTTGCTTCTGAATCTTTGCTACATTCAGCAACACCATGATGGAATTAGAACAT
JMSF042D03- TGATGTACTTGCTTCTGAATCTTTGCTACATTCAGCAACACCATGATGGAATTAGAACAT
____________________________________________________________
consensus TGATGTACTTGCTTCTGAATCTTTGCTACATTCAGCAACACCATGATGGAATTAGAACAT
. : . : . : . : . : . :
JMFF024H14- AA-----AGATACCGTGCAGGCGAACTGTGAGGCGCCCGGAAGATGCCTCCACAGCACAG
JMFF045P08- TA-----AGATACCGTGCATGCCAACTGTGAGGCGCCCGGAACATGCCTCCACAGCACAG
JMSF016O05- AA-----AGATACCGTGCAGGCGAACTGTGAGGCGCCCGGAAGATGCCTCCACAGCACAG
JMSF017O05- AA-----AGATACCGTGCAGGCGAACTGTGAGGCGCCCGGAAGATGCCTCCACANCACAG
JMFF051H18- AA-----AGATACCGTGCAGGCGAACTGTGAGGCGCCCGGAAGATGCCTCCACAGCACAG
JMSF038I19- AAAGCACAGATACCGTGCAGGCGAACTGTGAGGCGCCCGGAAGATGCCTCCACAGCACAG
JMFF003O19- AA-----AGATACCGTGCAGGCGAACTGTGAGGCGCCCGGAAGATGCCTCCACAGCACAG
JMFF026P01- AA-----AGATACCGTGCAGGCGAACTGTGAGGCGCCCGGAAGATGCCTCCACAGCACAG
JMSF042D03- AA-----AGATACCGTGCAGGCGAACTGTGAGGCGCCCGGAAGATGCCTCCACAGCACAG
____________________________________________________________
consensus AA-----AGATACCGTGCAGGCGAACTGTGAGGCGCCCGGAAGATGCCTCCACAGCACAG
. : . : . : . : . : . :
JMFF024H14- GGTATTTTCACGATCTGCAATACAGTATGGGTGCTTTCAAAGGCTTTCCGGAGCTTAATG
JMFF045P08- GGGATTTTCACGATCTGCAATACAGTATGGGTGCTTTCAAAGGCTTTCCGGAGCTTAATG
JMSF016O05- GGTATTTTCACGATCTGCAATACAGTATGGGTGCTTTCAAAGGCTTTCCGGAGCTTAATG
JMSF017O05- GGTATTTTCACGATCTGCAATACNGTATGGGTGCTTTCAAAGGCTTTCCGGAGCTTAATG
JMFF051H18- GGTATTTTCACGATCTGCAATACAGTATGGGTGCTTTCAAAGGCTTTCCGGAGCTTAATG
JMSF038I19- GGTATTTTCACGATCTGCAATACAGTATGGGTGCTTTCAAAGGCTTTCCGGAGCTTAATG
JMFF003O19- GGTATTTTCACGATCTGCAATACAGTATGGGTGCTTTCAAAGGCTTTCCGGAGCTTAATG
JMFF026P01- GGTATTTTCACGATCTGCAATACAGTATGGGTGCTTTCAAAGGCTTTCCGGAGCTTAATG
JMSF042D03- GGTATTTTCACGATCTGCAATACAGTATGGGTGCTTTCAAAGGCTTTCCGGAGCTTAATG
____________________________________________________________
consensus GGTATTTTCACGATCTGCAATACAGTATGGGTGCTTTCAAAGGCTTTCCGGAGCTTAATG
. : . : . : . : . : . :
JMFF024H14- AAGGCAACAATGTTCATCCTAGCGGGGATACTATTGAACCGGACTCCTCA
JMFF045P08- AAGGCAACAATGATCATCCTAGCGGGGATACTATTGAACCGGACTCCTCGAATGGAAGTG
JMSF016O05- AAGGCAACAATGTTCATCCTAGCGGGGATACTATTGAACCGGACTCCTCAAATGGCAGTG
JMSF017O05- AAGGCAACAATGTTCATCCTANCGGGGATACTATTGAANCGGACTCCTCAAATGGGAGTG
JMFF051H18- AAGGCAACAATGTTCATCCTAGCGGGGATACTATTGAACCGGACTCCTCAAATGGCAGTG
JMSF038I19- AAGGCAACAATGTTCATCCTAGCGGGGATACTATTGAACCGGACTCCTCAAATGGCAGTG
JMFF003O19- AAGGCAACAATGTTCATCCTAGCGGGGATACTATTGAACCGGACTCCTCAAATGGCAGTG
JMFF026P01- AAGGCAACAATGTTCATCCTAGCGGGGATACTATTGAACCGGACTCCTCAAATGGCAGTG
JMSF042D03- AAGGCAACAATGTTCATCCTAGCGGGGATACTATTGAACCGGACTCCTCAAATGGCAGTG
____________________________________________________________
consensus AAGGCAACAATGTTCATCCTAGCGGGGATACTATTGAACCGGACTCCTCAAATGGCAGTG
. : . : . : . : . : . :
JMFF045P08- AACATATTGACTCGTCTAACGAATCTCCTAAAAAGCCCGTCCACAATAACGCTTTTGGCT
JMSF016O05- AACATATTGACTCGTCTAACGAATCTCCAAAAAAGCCCGTCCAGAATAACGCTTTTGGCT
JMSF017O05- AACATATTGACTCGTCTANCGAATCTCCGAAAAAGCCC
JMFF051H18- AACATATTGACTCGTCTAACGAATCTCCAAAAAAGCCCGTCCAGAATAACGCTTTTGGCT
JMSF038I19- AACATATTGACTCGTCTAACGAATCTCCAAAAAAGCCCGTCCAGAATAACGCTTTTGGCT
JMFF003O19- AACATATTGACTCGTCTAACGAATCTCCAAAAAAGCCCGTCCAGAATAACGCTTTTGGCT
JMFF026P01- AACATATTGACTCGTCTAACGAATCTCCAAAAAAGCCCGTCCAGAATAACGCTTTTGGCT
JMSF042D03- AACATATTGACTCGTCTAACGAATCTCCAAAAAAGCCCGTCCAGAATAACGCTTTTGGCT
____________________________________________________________
consensus AACATATTGACTCGTCTAACGAATCTCCAAAAAAGCCCGTCCAGAATAACGCTTTTGGCT
. : . : . : . : . : . :
JMFF045P08- CTTGGTCTGCCTTTTACCCCGACTCGAATAATATGCGTCTTTTCACAACGAATGCTTTCG
JMSF016O05- CTTGGTCTGCCTTTTACCCCGACTCGAATAATATGCATCTTTT
JMFF051H18- CTTGGTCTGCCTTTTACCCCGACTCGAATAATATGCATCTTTTCACAACGAATGCTTTCG
JMSF038I19- CTTGGTCTGCCTTTTACCCCGACTCGAATAATATGCATCTTTTCACAACGAATGCTTTCG
JMFF003O19- CTTGGTCTGCCTTTTACCCCGACTCGAATAATATGCATCTTTTCACAACGAATGCTTTCG
JMFF026P01- CTTGGTCTGCCTTTTACCCCGACTCGAATAATATGCATCTTTTCACAACGAATGCTTTCG
JMSF042D03- CTTGGTCTGCCTTTTACCCCGACTCGAATAATATGCATCTTTTCACAACGAATGCTTTCG
____________________________________________________________
consensus CTTGGTCTGCCTTTTACCCCGACTCGAATAATATGCATCTTTTCACAACGAATGCTTTCG
. : . : . : . : . : . :
JMFF045P08- AGGCCCAATTCCATCCTTATGCAGTGGACAAC
JMFF051H18- AGGGCCCATTCCATCCTTATGCAGTGGACAACCAATTCCATTACGCTCCATTCAACGTGT
JMSF038I19- AGGCCCAATTCCATCCTTATGCAGTGGACAACCAATTCCATTACGCTCCATTCAACGTGT
JMFF003O19- AGGCCCAATTCCATCCTTATGCAGTGGACAACCAATTCCATTACGCTCCATTCAACGTGT
JMFF026P01- AGGCCCAATTCCATCCTTATGCAGTGGACAACCAATTCCATTACGCTCCATTCAACGTGT
JMSF042D03- AGGCCCAATTCCATCCTTATGCAGTGGACAACCAATTCCATTACGCTCCATTCAACGTGT
____________________________________________________________
consensus AGGCCCAATTCCATCCTTATGCAGTGGACAACCAATTCCATTACGCTCCATTCAACGTGT
. : . : . : . : . : . :
JMFF051H18- TCTATCAACAATACC
JMSF038I19- TCTATCAACAATACCCTCGGGAATTTTCAATTCCAAGACTTCCAATATTTCGTGGTCATC
JMFF003O19- TCTATCAACAATACCCTCGGGAA-T
JMFF026P01- TCTATCAACAATACCCTCGGGAA-T
JMSF042D03- TCTATCAACAATACCCTCGGGAA-TTTCAATTCCAAGACTTCCAATATTTCGTGGTCATC
rJMSF038I19+ GACTTCCAATATTTCGTGGTCATC
____________________________________________________________
consensus TCTATCAACAATACCCTCGGGAA-TTTCAATTCCAAGACTTCCAATATTTCGTGGTCATC
. : . : . : . : . : . :
JMSF038I19- GACTTCGAGGCTACCTGCAACAAGGAAAAGAATCCTCATCCCC
JMSF042D03- GACTTCGAGGCTACCTGCAACAAGGAAAAGAATCCTCATCCCCAAGAAATAATCGAG-TT
rJMSF038I19+ GACTTCGAGGCTACCTGCAACAAGGAAAAGAATCNTCATCCCCAAGAAATAATCGAGTTT
____________________________________________________________
consensus GACTTCGAGGCTACCTGCAACAAGGAAAAGAATCCTCATCCCCAAGAAATAATCGAGTTT
. : . : . : . : . : . :
JMSF042D03- TCCGTCTGTAATTGTTAGTAGCATGAGCGGGCAGCTAGAAGCTTGTTTTCAAACATATGT
rJMSF038I19+ TCCGTCTGTAATTGTTAGTAGCATGAGCGGGCAGCTAGAAGCTTGTTTTCAAACATATGT
rJMSF042D03+ TGTTAGTAGCATGAGCGGGCAGCTAGAAGCTTGTTTTCAAACATATGT
rJMSF016O05+ TGTTAGTAGCATGAGCGGGCAGCTAGAAGCTTGTTTTCAAACATATGT
____________________________________________________________
consensus TCCGTCTGTAATTGTTAGTAGCATGAGCGGGCAGCTAGAAGCTTGTTTTCAAACATATGT
. : . : . : . : . : . :
JMSF042D03- GCGGCCAACATGCAATCAGCTCCTCAGTGATTTCTGCAAGGATCTGACTGGCATCGAGCA
rJMSF038I19+ GCGGCCAACATGCAATCAGCTCCTCAGTGATTTCTGCAAGGATCTGACTGGCATCGAGCA
rJMSF042D03+ GCGGCCAACATGCAATCAGCTCCTCAGTGATTTCTGCAAGGATCTGACTGGCATCGAGCA
rJMFF003O19+ CAATCAGCTCCTCAGTGATTTCTGCAAGGATNTGACTGGCATCGAGCA
rJMFF026P01+ CGAGCA
rJMSF016O05+ GCGGCCAACATGCAATCAGCTCCTCAGTGATTTCTGCAAGGATCTGACTGGCATCGAGCA
____________________________________________________________
consensus GCGGCCAACATGCAATCAGCTCCTCAGTGATTTCTGCAAGGATCTGACTGGCATCGAGCA
. : . : . : . : . : . :
rJMSF038I19+ AATCCAGGTGGACCGAGGGGTTACTCTGACTGAAGCGCTCCTTAGGCATGACAAGTGGCT
rJMSF042D03+ AATCCAGGTGGACCGAGGGGTTACTCTGACTGAAGCGCTCCTTAGGCATGACAAGTGGCT
rJMFF003O19+ AATCCAGGTGGTCCGAGGGGTTACTNNGACTGAAGCGCTCCTTAGGCATGACAAGTGGCT
rJMFF026P01+ AATCCAGGTGGACCGAGGGGTTACTCTGACTGAAGCGCTCCTTAGGCATGACAAGTGGCT
rJMSF016O05+ AATCCAGGTGGACCGAGGGGTTACTCTGACTGAAGCGCTCCTTAGGCATGACAAGTGGCT
rJMFF024H14+ TGACTGAAGCGCTCCTTAGGCATGACAAGTGGCT
____________________________________________________________
consensus AATCCAGGTGGACCGAGGGGTTACTCTGACTGAAGCGCTCCTTAGGCATGACAAGTGGCT
. : . : . : . : . : . :
rJMSF038I19+ CGAGAAAAAAGGGATAAAAAATTCCAACTTTGCTGTGGTTACATGGTCGAATTGGGATTG
rJMSF042D03+ CGAGAAAAAAGGGATAAAAAATTCCAACTTTGCTGTGGTTACATGGTCGAATTGGGATTG
rJMFF003O19+ CGAGAAAAAAGGGATAAAAAATTCCAACTTTGCTGTGGTTACATGGTCGAATTGGGATTG
rJMFF026P01+ CGAGAAAAAAGGGATAAAAAATTCCAACTTTGCTGTGGTTACATGGTCGAATTGGGATTG
rJMSF016O05+ CGAGAAAAAAGGGATAAAAAATTCCAACTTTGCTGTGGTTACATGGTCGAATTGGGATTG
rJMFF024H14+ CGAGAAAAAAGGGATAAAAAATTCCAACTTTGCTGTGGTTACATGGTCGAATTGGGATTG
rJMFF013B01+ AAAAAATTCCAACTTTGCTGTGGTTACATGGTCGAATTGGGATTG
____________________________________________________________
consensus CGAGAAAAAAGGGATAAAAAATTCCAACTTTGCTGTGGTTACATGGTCGAATTGGGATTG
. : . : . : . : . : . :
rJMSF038I19+ CAGAGTGATTTTGGAATCAGAATGTCGGTACAAGAAGATCAGAAAGCCGCCTTATTTCAA
rJMSF042D03+ CAGAGTGATTTTGGAATCAGAATGTCGGTACAAGAAGATCAGAAAGCCGCCTTATTTCAA
rJMFF003O19+ CAGAGTGATTTTGGAATCAGAATGTCGGTACAAGAAGATCAGAAAGCCGCCTTATTTCAA
rJMFF026P01+ CAGAGTGATTTTGGAATCAGAATGTCGGTACAAGAAGATCAGAAAGCCGCCTTATTTCAA
rJMSF016O05+ CAGAGTGATTTTGGAATCAGAATGTCGGTACAAGAAGATCAGAAAGCCGCCTTATTTCAA
rJMFF024H14+ CAGAGTGATTTTGGAATCAGAATGTCGGTACAAGAAGATCAGAAAGCCGCCTTATTTCAA
rJMFF013B01+ CAGAGTGATTTTGGAATCAGAATGTCGGTACAAGAAGATCAGAAAGCCGCCTTATTTCAA
____________________________________________________________
consensus CAGAGTGATTTTGGAATCAGAATGTCGGTACAAGAAGATCAGAAAGCCGCCTTATTTCAA
. : . : . : . : . : . :
rJMSF038I19+ CAGATGGATCAACTTAAAGGTCCCTTTCCGCGATGCATTTGGAGGGATGAGGTGCAATCT
rJMSF042D03+ CAGATGGATCAACTTAAAGGTCCCTTTCCGCGATGCATTTGGAGGGATGAGGTGCAATCT
rJMFF003O19+ CAGATGGATCAACTTAAAGGTCCCTTTCCGCGATGCATTTGGAGGGATGAGGTGCAATNT
rJMFF026P01+ CAGATGGATCAACTTAAAGGTCCCTTTCCGCGATGCATTTGGAGGGATGAGGTGCAATCT
rJMSF016O05+ CAGATGGATCAACTTAAAGGTCCCTTTCCGCGATGCATTTGGAGGGATGAGGTGCAATCT
rJMFF024H14+ CAGATGGATCAACTTAAAGGTCCCTTTCCGCGATGCATTTGGAGGGATGAGGTGCAATCT
rJMFF013B01+ CAGATGGATCAACTTAAAGGTCCCTTTCCGCGATGCATTTGGAGGGATGAGGTGCAATCT
____________________________________________________________
consensus CAGATGGATCAACTTAAAGGTCCCTTTCCGCGATGCATTTGGAGGGATGAGGTGCAATCT
. : . : . : . : . : . :
rJMSF038I19+ GAAAGAAGCGATGCAGATTGCTGGGCTGGCCTGGCAGGGCCGTGCTCACTGTGGTCTGGA
rJMSF042D03+ GAAAGAAGCGATGCAGATTGCTGGGCTGGCCTGGCAGGGCCGTGCTCACTGTGGTCTGGA
rJMFF003O19+ GAAAGAAGCGATGCAGATTGCTGGGCTGGCCTGGCAGGGCCGTGCTCACTGTGGTCTGGA
rJMFF026P01+ GAAAGAAGCGATGCAGATTGCTGGGCTGGCCTGGCAGGGCCGTGCTCACTGTGGTCTGGA
rJMSF016O05+ GAAAGAAGCGATGCAGATTGCTGGGCTGGCCTGGCAGGGCCGTGCTCACTGTGGTCTGGA
rJMFF024H14+ GAAAGAAGCGATGCAGATTGCTGGGCTGGCCTGGCAGGGCCGTGCTCACTGTGGTCTGGA
rJMFF013B01+ GAAAGAAGCGATGCAGATTGCTGGGCTGGCCTGGCAGGGCCGTGCTCACTGTGGTCTGGA
____________________________________________________________
consensus GAAAGAAGCGATGCAGATTGCTGGGCTGGCCTGGCAGGGCCGTGCTCACTGTGGTCTGGA
. : . : . : . : . : . :
rJMSF038I19+ TGATGCCAAAAACACTGCCCGCCTTCTTGCCTTACTCATGCACCGAGGTTTCAAGCTTTC
rJMSF042D03+ TGATGCCAAAAACACTGCCCGCCTTCTTGCCTTACTCATGCACCGAGGTTTCAAGCTTTC
rJMFF003O19+ TGATGCCAAAAACACTGCCCGCNTTCTTGCCTTACTCATGCACCGAGGTTTCAAGCTTTC
rJMFF026P01+ TGATGCCAAAAACACTGCCCGCNTTCTTGCCTTACTCATGCACCGAGGTTTCAAGCTTTC
rJMSF016O05+ TGATGCCAAAAACACTGCCCGCCTTCTTGCCTTACTCATGCACCGAGGTTTCAAGCTTTC
rJMFF024H14+ TGATGCCAAAAACACTGCCCGCCTTCTTGCCTTACTCATGCACCGAGGTTTCAAGCTTTC
rJMFF045P08+ GCCTTTCTCATGCACAGAGGTTTCAAGCTTTT
rJMFF013B01+ TGATGCCAAAAACACTGCCCGCCTTCTTGCCTTACTCATGCACCGAGGTTTCAAGCTTTC
rJMFF051H18+ CATGCACCGAGGTTTCAAGCTTTC
____________________________________________________________
consensus TGATGCCAAAAACACTGCCCGCCTTCTTGCCTTACTCATGCACCGAGGTTTCAAGCTTTC
. : . : . : . : . : . :
rJMSF038I19+ GATCACAGATGCACT-CATGTATCAGACTACCAATGAGTCTTTTGCGTGGAAGCTCCCCC
rJMSF042D03+ GATCACAGATGCACT-CATGTATCAGACTACCAATGAGTCTTTTGCGTGGAAGCTCCCCC
rJMFF003O19+ GATCACAGATGCACT-CANGTATCAGACTACCAATGAGTCTTTTGCGTGGAAGCTCCCCC
rJMFF026P01+ GATCACAGATGCACT-CATGTATCAGACTACCAATGAGTCTTTTGCGTGGAAGCTCCCCC
rJMSF016O05+ GATCACAGATGCACT-CATGTATCAGACTACCAATGAGTCTTTTGCGTGGAAGCTCCCCC
rJMFF024H14+ GATCACAGATGCACT-CATGTATCAGACTACCAATGAGTCTTTTGCGTGGAAGCTCCCCC
rJMFF045P08+ GATCTCATATGCACTGCATGTGTCAGCCTTCCAAGGAGTCTTCTGTGCGGAAGCTCCCCC
rJMFF013B01+ GATCACAGATGCACT-CATGTATCAGACTACCAATGAGTCTTTTGCGTGGAAGCTCCCCC
rJMFF051H18+ GATCACAGATGCACT-CATGTATCAGACTACCAATGAGTCTTTTGCGTGGAAGCTCCCCC
____________________________________________________________
consensus GATCACAGATGCACT-CATGTATCAGACTACCAATGAGTCTTTTGCGTGGAAGCTCCCCC
. : . : . : . : . : . :
rJMSF038I19+ TCGATCACCACCAATCGGTCTCCCCATCATACGAACCTCAAAAAGCTAGACAGCTTCACG
rJMSF042D03+ TCGATCACCACCAATCGGTCTCCCCATCATACGAACCTCAAAAAGCTAGACAGCTTCACG
rJMFF003O19+ TCGATCACCACCAATCGGTCTCCCCAT
rJMFF026P01+ TCGATCACCACCAATCGGTCTCCCCATCA
rJMSF016O05+ TCGATCACCACCAATCGGTCTCCCCATCATACGAACCTCAAAAAGCTAGACAGCTTCACG
rJMFF024H14+ TCGATCACCACCAATCGGTCTCCCCATCATACGAACCTCAAAAAGCTAGACAGCTTCACG
rJMSF017O05+ CCCATCATACGAACCTCAAAAAGCTAGACAGCTTCACG
rJMFF045P08+ TCAATCACCCCCAATCGGTCTCCCCATCATAGCATCCTCAAAAAGTTAGACAGTTTCCCG
rJMFF013B01+ TCGATCACCACCAATCGGTCTCCCCATCATACGAACCTCAAAAAGCTAGACAGCTTCACG
rJMFF051H18+ TCGATCACCACCAATCGGTCTCCCCATCATACGAACCTCAAAAAGCTAGACAGCTTCACG
____________________________________________________________
consensus TCGATCACCACCAATCGGTCTCCCCATCATACGAACCTCAAAAAGCTAGACAGCTTCACG
. : . : . : . : . : . :
rJMSF038I19+ TTCCAACGGCTCAGATTCACCCTTACTGTTTCTGCGGGATGAAGAGCAGCAAAGGCATGG
rJMSF042D03+ TTCCAACGGCTCAGATTCACCCTTACTGTTTCTGCGGGATGAAGAGCAGCAAAGGCATGG
rJMSF016O05+ TTCCAACGGCTCAGATTCACCCTTACTGTTTCTGCGGGATGAAGAGCAGCAAAGGCATGG
rJMFF024H14+ TTCCAACGGCTCAGATTCACCCTTACTGTTTCTGCGGGATGAAGAGCAGCAAAGGCATGG
rJMSF017O05+ TTCCAACGGCTCAGATTCACCCTTACCGNTTCTGCGGGATGAAGAGCAGCAAAGGCATGG
rJMFF045P08+ TTCCACCGGCTCAGATTCACCCATACGGATTCTCCGGGATGAAGAACAGCAAAGGCAAGG
rJMFF013B01+ TTCCAACGGCTCAGATTCACCCTTACTGTTTCTGCGGGATGAAGAGCAGCAAAGGCATGG
rJMFF051H18+ TTCCAACGGCTCAGATTCACCCTTACTGTTTCTGCGGGATGAAGAGCAGCAAAGGCATGG
____________________________________________________________
consensus TTCCAACGGCTCAGATTCACCCTTACTGTTTCTGCGGGATGAAGAGCAGCAAAGGCATGG
. : . : . : . : . : . :
rJMSF038I19+ TTCAGAAGCCGGGACCAAAGCAAGGAAGCCTCTTCTTTGGCTGTGGGAATTGGACAGCTG
rJMSF042D03+ TTCAGAAGCCGGGACCAAAGCAAGGAAGCCTCTTCTTTGGCTGTGGGAATTGGACAGCTG
rJMSF016O05+ TTCAGAAGCCGGGACCAAAGCAAGGAAGCCTCTTCTTTGGCTGTGGGAATTGGACAGCTG
rJMFF024H14+ TTCAGAAGCCGGGACCAAAGCAAGGAAGCCTCTTCTTTGGCTGTGGGAATTGGACAGCTG
rJMSF017O05+ TTCAGAAGCCGGGACCAAAGCAAGGAAGCCTCTTCTTNGGCTGTGGGAATTGGACAGCTG
rJMFF045P08+ TTCAGAAACCGGGACCAAAGCAAGGAAGCTTCTTCTTTGGCTGTGGGAATTGGGCAGGAG
rJMFF013B01+ TTCAGAAGCCGGGACCAAAGCAAGGAAGCCTCTTCTTTGGCTGTGGGAATTGGACAGCTG
rJMFF051H18+ TTCAGAAGCCGGGACCAAAGCAAGGAAGCCTCTTCTTTGGCTGTGGGAATTGGACAGCTG
____________________________________________________________
consensus TTCAGAAGCCGGGACCAAAGCAAGGAAGCCTCTTCTTTGGCTGTGGGAATTGGACAGCTG
. : . : . : . : . : . :
rJMSF038I19+ CACTGGGCGCTAGCTGCCATTTCTTCAAA-TGGGATTCTCCTTAACCCAATCGGAGAAAA
rJMSF042D03+ CACTGGGCGCTAGCTGCCATTTCTTCAAA-TGGGATTCTCCTTAACCCAATCGGAGAAAA
rJMSF016O05+ CACTGGGCGCTAGCTGCCATTTCTTCAAA-TGGGATTCTCCTTAACCCAATCGGAGAAAA
rJMFF024H14+ CACTGGGCGCTAGCTGCCATTTCTTCAAA-TGGGATTCTCCTTAACCCAATCGGAGAAAA
rJMSF017O05+ CACTGGGCGCTAGCTGCCATTTCTTCAAACTGGGATTNTCCTTAACCCAATCGGAGAAAA
rJMFF045P08+ CAATGGGCGTCAGTAACCAGTTGTTCAAA-TGGGATTTTCCTTAACCCAATCGGAGAAAA
rJMFF013B01+ CACTGGGCGCTAGCTGCCATTTCTTCAAA-TGGGATTCTCCTTAACCCAATCGGAGAAAA
rJMFF051H18+ CACTGGGCGCTAGCTGCCATTTCTTCAAA-TGGGATTCTCCTTAACCCAATCGGAGAAAA
____________________________________________________________
consensus CACTGGGCGCTAGCTGCCATTTCTTCAAA-TGGGATTCTCCTTAACCCAATCGGAGAAAA
. : . : . : . : . : . :
rJMSF038I19+ GGAAAAGAAACTCGATAATCT
rJMSF042D03+ GGAAAAGAAACTCGATAATCT
rJMSF016O05+ GGAAAAGAAACTCGATAATCT
rJMFF024H14+ GGAAAAGAAACTCGATAATCTTGCCTAATCACCTAGG
rJMSF017O05+ GGAAAAGAAACTCGA
rJMFF045P08+ GGAAAAGAAACT
rJMFF013B01+ GGAAAAGAAACTCGATAATCTTGCCTAATCACCTAGG
rJMFF051H18+ GGAAAAGAAACTCGATAATCTTGCCTAATCACCTAGGCATATTATCTCCTGTAAAAAGTG
____________________________________________________________
consensus GGAAAAGAAACTCGATAATCTTGCCTAATCACCTAGGCATATTATCTCCTGTAAAAAGTG