clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF035H14 | Sequence | 492 | 003339 (9) | emb|CDP04003.1| | 9e-48 | unnamed protein product [Coffea canephora] | 737 | 003339 (9) | emb|CDP04003.1| | 4e-61 | unnamed protein product [Coffea canephora] |
JMFF036G01 | Sequence | 477 | 003339 (9) | emb|CDP04003.1| | 4e-45 | unnamed protein product [Coffea canephora] | 599 | 003339 (9) | emb|CDP04003.1| | 5e-54 | unnamed protein product [Coffea canephora] |
JMFN030E24 | Sequence | 554 | 003339 (9) | emb|CDP04003.1| | 1e-28 | unnamed protein product [Coffea canephora] | |||||
JMFN033F09 | Sequence | 609 | 003339 (9) | emb|CDP04003.1| | 9e-31 | unnamed protein product [Coffea canephora] | |||||
JMFN034E01 | Sequence | 600 | 003339 (9) | emb|CDP04003.1| | 2e-26 | unnamed protein product [Coffea canephora] | |||||
JMSF024P04 | Sequence | 647 | 003339 (9) | emb|CDP04003.1| | 4e-62 | unnamed protein product [Coffea canephora] | 734 | 003339 (9) | emb|CDP04003.1| | 8e-62 | unnamed protein product [Coffea canephora] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig003339============================================ 915 124 ----------------------------------------------------->JMFF035H14 <------------------------------------------------------------------------------rJMFF035H14 135 ---------------------------------------------------------------------->JMSF024P04 <------------------------------------------------------------------------------rJMSF024P04 154 --------------------------------------------------->JMFF036G01 <----------------------------------------------------------------rJMFF036G01
The following clones don't have the opposite end in this pair.
<-------------------------------------------------------JMFN030E24- <-----------------------------------------------------------------JMFN034E01- <--------------------------------------------------------------JMFN033F09-