clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFN039E08 | Sequence | 609 | 009486 (6) | ref|XP_004507417.1| | 3e-75 | PREDICTED: ATP-dependent Clp protease proteolytic subunit 6, chloroplastic-like | |||||
JMSF021A11 | Sequence | 539 | 009486 (6) | ref|XP_004507417.1| | 2e-50 | PREDICTED: ATP-dependent Clp protease proteolytic subunit 6, chloroplastic-like | |||||
JMSF028B09 | Sequence | 669 | 009486 (6) | ref|XP_004507417.1| | 3e-74 | PREDICTED: ATP-dependent Clp protease proteolytic subunit 6, chloroplastic-like | 794 | 009486 (6) | gb|KJB32183.1| | 4e-111 | hypothetical protein B456_005G228000 [Gossypium raimondii] |
JMSF040F23 | Sequence | 644 | 009486 (6) | ref|XP_004507417.1| | 2e-66 | PREDICTED: ATP-dependent Clp protease proteolytic subunit 6, chloroplastic-like | 821 | 009486 (6) | ref|XP_009631771.1| | 2e-130 | PREDICTED: ATP-dependent Clp protease proteolytic subunit 6, chloroplastic isof |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig009486============================================1157 11 --------------------------------------------------------->JMSF028B09 <-------------------------------------------------------------------rJMSF028B09 29 ------------------------------------------------------->JMSF040F23 <----------------------------------------------------------------------rJMSF040F23
The following clones don't have the opposite end in this pair.
---------------------------------------------------->JMFN039E08- ---------------------------------------------->JMSF021A11-