| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMSF011B16 | Sequence | 200 | 013945 (9) | 741 | 013945 (9) | ref|XP_009627900.1| | 7e-85 | PREDICTED: protein LOW PSII ACCUMULATION 3, chloroplastic [Nicotiana tomentosif | |||
| JMSF018E05 | Sequence | 537 | 013945 (9) | ref|XP_004241678.1| | 1e-44 | PREDICTED: protein LOW PSII ACCUMULATION 3, chloroplastic [Solanum lycopersicum | 760 | 013945 (9) | ref|XP_009627900.1| | 7e-84 | PREDICTED: protein LOW PSII ACCUMULATION 3, chloroplastic [Nicotiana tomentosif |
| JMSF047G20 | Sequence | 670 | 013945 (9) | emb|CDO98234.1| | 2e-76 | unnamed protein product [Coffea canephora] | 709 | 013945 (9) | ref|XP_009627900.1| | 3e-87 | PREDICTED: protein LOW PSII ACCUMULATION 3, chloroplastic [Nicotiana tomentosif |
| JMSF052F05 | Sequence | 698 | 013945 (9) | emb|CDO98234.1| | 3e-70 | unnamed protein product [Coffea canephora] | 954 | 013945 (9) | ref|XP_009627900.1| | 5e-119 | PREDICTED: protein LOW PSII ACCUMULATION 3, chloroplastic [Nicotiana tomentosif |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig013945============================================1596 17 ------------------------------------------->JMSF052F05 <----------------------------------------------------------rJMSF052F05 34 --------------------------------->JMSF018E05 <----------------------------------------------rJMSF018E05 71 ----------->JMSF011B16 <--------------------------------------------rJMSF011B16 108 ----------------------------------------->JMSF047G20 <------------------------------------------rJMSF047G20
The following clones don't have the opposite end in this pair.
<----------------------------------------rJMSF026L22*