clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFN039C05 | Sequence | 602 | 007230 (8) | ref|XP_006349930.1| | 6e-40 | PREDICTED: translation initiation factor IF-1, chloroplastic-like [Solanum tube | |||||
JMFN043A06 | Sequence | 620 | 007230 (8) | ref|XP_006349930.1| | 8e-40 | PREDICTED: translation initiation factor IF-1, chloroplastic-like [Solanum tube | |||||
JMSF029J24 | Sequence | 664 | 007230 (8) | ref|XP_006349930.1| | 1e-39 | PREDICTED: translation initiation factor IF-1, chloroplastic-like [Solanum tube | 658 | 007230 (8) | ref|XP_006349930.1| | 1e-39 | PREDICTED: translation initiation factor IF-1, chloroplastic-like [Solanum tube |
JMSF036E14 | Sequence | 607 | 007230 (8) | ref|XP_006349930.1| | 7e-40 | PREDICTED: translation initiation factor IF-1, chloroplastic-like [Solanum tube | 563 | 007230 (8) | ref|XP_006349930.1| | 4e-40 | PREDICTED: translation initiation factor IF-1, chloroplastic-like [Solanum tube |
JMSF048K21 | Sequence | 634 | 007230 (8) | ref|XP_006349930.1| | 9e-40 | PREDICTED: translation initiation factor IF-1, chloroplastic-like [Solanum tube | 587 | 007230 (8) | ref|XP_006349930.1| | 6e-40 | PREDICTED: translation initiation factor IF-1, chloroplastic-like [Solanum tube |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig007230============================================ 672 27 -------------------------------------------------------------------------------------------------->JMSF029J24 <-----------------------------------------------------------------------------------------------rJMSF029J24 90 -------------------------------------------------------------------------------------------->JMSF048K21 <--------------------------------------------------------------------------------------rJMSF048K21 117 ---------------------------------------------------------------------------------------->JMSF036E14 <----------------------------------------------------------------------------------rJMSF036E14
The following clones don't have the opposite end in this pair.
----------------------------------------------------------------------------------------->JMFN039C05- ------------------------------------------------------------------------------------------->JMFN043A06-