clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF040C08 | Sequence | 483 | 011615 (11) | ref|XP_009595108.1| | 2e-11 | PREDICTED: nucleolin-like [Nicotiana tomentosiformis] | 741 | 011615 (11) | ref|XP_009796211.1| | 3e-12 | PREDICTED: prostatic spermine-binding protein-like [Nicotiana sylvestris] ref|X |
JMFF043K08 | Sequence | 587 | 011615 (11) | ref|XP_009796211.1| | 9e-11 | PREDICTED: prostatic spermine-binding protein-like [Nicotiana sylvestris] ref|X | 519 | 011615 (11) | ref|XP_009796211.1| | 6e-07 | PREDICTED: prostatic spermine-binding protein-like [Nicotiana sylvestris] ref|X |
JMFN019J04 | Sequence | 499 | 011615 (11) | ||||||||
JMSF011O06 | Sequence | 282 | 011615 (11) | 695 | 011615 (11) | ref|XP_009796211.1| | 5e-12 | PREDICTED: prostatic spermine-binding protein-like [Nicotiana sylvestris] ref|X | |||
JMSF017K18 | Sequence | 376 | 011615 (11) | ref|XP_009796211.1| | 2e-12 | PREDICTED: prostatic spermine-binding protein-like [Nicotiana sylvestris] ref|X | 735 | 011615 (11) | ref|XP_009796211.1| | 5e-12 | PREDICTED: prostatic spermine-binding protein-like [Nicotiana sylvestris] ref|X |
JMSF017L18 | Sequence | 504 | 011615 (11) | ref|XP_009595108.1| | 7e-08 | PREDICTED: nucleolin-like [Nicotiana tomentosiformis] | 747 | 011615 (11) | ref|XP_009796211.1| | 6e-12 | PREDICTED: prostatic spermine-binding protein-like [Nicotiana sylvestris] ref|X |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig011615============================================ 845 9 -------------------------------------------------------->JMFF040C08 <--------------------------------------------------------------------------------------rJMFF040C08 38 ----------------------------------------------------------->JMSF017L18 <--------------------------------------------------------------------------------------rJMSF017L18 42 ------------------------------------------->JMSF017K18 <-------------------------------------------------------------------------------------rJMSF017K18 85 -------------------------------->JMSF011O06 <---------------------------------------------------------------------------------rJMSF011O06 125 --------------------------------------------------------------------->JMFF043K08 <------------------------------------------------------------rJMFF043K08
The following clones don't have the opposite end in this pair.
---------------------------------------------------------->JMFN019J04-