| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF040C08 | Sequence | 483 | 011615 (11) | ref|XP_009595108.1| | 2e-11 | PREDICTED: nucleolin-like [Nicotiana tomentosiformis] | 741 | 011615 (11) | ref|XP_009796211.1| | 3e-12 | PREDICTED: prostatic spermine-binding protein-like [Nicotiana sylvestris] ref|X |
| JMFF043K08 | Sequence | 587 | 011615 (11) | ref|XP_009796211.1| | 9e-11 | PREDICTED: prostatic spermine-binding protein-like [Nicotiana sylvestris] ref|X | 519 | 011615 (11) | ref|XP_009796211.1| | 6e-07 | PREDICTED: prostatic spermine-binding protein-like [Nicotiana sylvestris] ref|X |
| JMFN019J04 | Sequence | 499 | 011615 (11) | ||||||||
| JMSF011O06 | Sequence | 282 | 011615 (11) | 695 | 011615 (11) | ref|XP_009796211.1| | 5e-12 | PREDICTED: prostatic spermine-binding protein-like [Nicotiana sylvestris] ref|X | |||
| JMSF017K18 | Sequence | 376 | 011615 (11) | ref|XP_009796211.1| | 2e-12 | PREDICTED: prostatic spermine-binding protein-like [Nicotiana sylvestris] ref|X | 735 | 011615 (11) | ref|XP_009796211.1| | 5e-12 | PREDICTED: prostatic spermine-binding protein-like [Nicotiana sylvestris] ref|X |
| JMSF017L18 | Sequence | 504 | 011615 (11) | ref|XP_009595108.1| | 7e-08 | PREDICTED: nucleolin-like [Nicotiana tomentosiformis] | 747 | 011615 (11) | ref|XP_009796211.1| | 6e-12 | PREDICTED: prostatic spermine-binding protein-like [Nicotiana sylvestris] ref|X |
This contig is upended
. : . : . : . : . : . :
JMFN019J04+ CAAGT
rJMFF040C08- T
____________________________________________________________
consensus CAAGT
. : . : . : . : . : . :
JMFN019J04+ AAAGTGAATCAAATGGAGCATATGCCATAAGTCGCAACAATCTCTCACATAATAAAAGCA
rJMFF040C08- AAAGTGAATCAAATGGAACATATACCATAAGTCACAACAATCTCTCACATAATAAAAGCA
rJMSF017K18- CAACAATCTCTCACATAATAAAAGCA
rJMSF017L18- GTCACAACAATCTCTCACATAATAAAAGCA
____________________________________________________________
consensus AAAGTGAATCAAATGGAGCATATGCCATAAGTCACAACAATCTCTCACATAATAAAAGCA
. : . : . : . : . : . :
JMFN019J04+ GTTCACAGTCTAAACAAGGATGGTCAATTTCCTAAGCTACAAAGAGCCAGACAAAGCTAA
rJMFF040C08- GTTCACAGTCTAAACAAGGATGGTCAATTTCCTAAGCTACAAAGAGCCAGACAAAGCTAA
rJMSF017K18- GTTCACAGTCTAAACAAGGATGGTCAATTTCCTAAGCTACAAAGAGCCAGACAAAGCTAA
rJMSF017L18- GTTCACAGTCTAAACAAGGATGGTCAATTTCCTAAGCTACAAAGAGCCAGACAAAGCTAA
rJMSF011O06- GGATGGTCAATTTCCTAAGCTACAAAGAGCCAGACAAAGCTAA
____________________________________________________________
consensus GTTCACAGTCTAAACAAGGATGGTCAATTTCCTAAGCTACAAAGAGCCAGACAAAGCTAA
. : . : . : . : . : . :
JMFN019J04+ ACTTGGGTCCTAGTTACTAAGATATAATAATCCCAACCATTACATGGAGGCAGGTAGAAT
rJMFF040C08- ACTTGGGTCCTAGTTACTAAGATATAATAATCCCAACCATTACATGGAGGCAGGTAGAAT
rJMSF017K18- ACTTGGGTCCTAGTTACTAAGATATAATAATCCCAACCATTACATGGAGGCAGGTAGAAT
rJMSF017L18- ACTTGGGTCCTAGTTACTAAGATATAATAATCCCAACCATTACATGGAGGCAGGTAGAAT
rJMFF043K08- ACTTGGGTCCTAGTTACTAAGATATAATAATCCCAACCATTACATGGAGGCAGGTAGAAT
rJMSF011O06- ACTTGGGTCCTAGTTACTAAGATATAATAATCCCAACCATTACATGGAGGCAGGTAGAAT
____________________________________________________________
consensus ACTTGGGTCCTAGTTACTAAGATATAATAATCCCAACCATTACATGGAGGCAGGTAGAAT
. : . : . : . : . : . :
JMFN019J04+ GAACATCATCTAAAACACCTTCACTTCCTCTTCTTGGCGGGTGGTTGGTCCTCTTCGTCC
rJMFF040C08- GAACATCATCTAAAACACCTTCACTTCCTCTTCTTGGCGGGTGGTTGGTCCTCTTCGTCC
rJMSF017K18- GAACATCATCTAAAACACCTTCACTTCCTCTTCTTGGCGGGTGGTTGGTCCTCTTCGTCC
rJMSF017L18- GAACATCATCTAAAACACCTTCACTTCCTCTTCTTGGCGGGTGGTTGGTCCTCTTCGTCC
rJMFF043K08- GAACATCATCTAAAACACCTTCACTTCCTCTTCTTGGCGGGTGGTTGGTCCTCTTCGTCC
rJMSF011O06- GAACATCATCTAAAACACCTTCACTTCCTCTTCTTGGCGGGTGGTTGGTCCTCTTCGTCC
____________________________________________________________
consensus GAACATCATCTAAAACACCTTCACTTCCTCTTCTTGGCGGGTGGTTGGTCCTCTTCGTCC
. : . : . : . : . : . :
JMFN019J04+ TCCTCGTCCTCTTGTTCTTCGTCCTCCTCGTCACCGTCCTCGTCCTCGTCTCCATCATGG
rJMFF040C08- TCCTCGTCCTCTTCTTCTTCGTCCTCCTCGTCACCGTCCTCGTCCTCGTCTCCATCATCG
rJMSF017K18- TCCTCGTCCTCTTCTTCTTCGTCCTCCTCGTCACCGTCCTCGTCCTCGTCTCCATCATCG
rJMSF017L18- TCCTCGTCCTCTTCTTCTTCGTCCTCCTCGTCACCGTCCTCGTCCTCGTCTCCATCATCG
rJMFF043K08- TCCTCGTCCTCTTCTTCTTCGTCCTCCTCGTCACCGTCCTCGTCCTCGTCTCCATCATCG
rJMSF011O06- TCCTCGTCCTCTTCTTCTTCGTCCTCCTCGTCACCGTCCTCGTCCTCGTCTCCATCATCG
JMFF043K08+ TCTTCTTCGTCCTCCTCGTCACCGTCCTCGTCCTCGTCTCCATCATCG
____________________________________________________________
consensus TCCTCGTCCTCTTCTTCTTCGTCCTCCTCGTCACCGTCCTCGTCCTCGTCTCCATCATCG
. : . : . : . : . : . :
JMFN019J04+ TCTTCATCATCATCGTCGCTGCCTTCATTTCCGTTGGCTGTGGGATCTTCCTCGGGATCC
rJMFF040C08- TCTTCATCATCATCGTCGCTGCCTTCATTTCCGTTGGCTGTGGGATCTTCCTCGGGATCC
rJMSF017K18- TCTTCATCATCATCGTCGCTGCCTTCATTTCCGTTGGCTGTGGGATCTTCCTCGGGATCC
rJMSF017L18- TCTTCATCATCATCGTCGCTGCCTTCATTTCCGTTGGCTGTGGGATCTTCCTCGGGATCC
rJMFF043K08- TCTTCATCATCATCGTCGCTGCCTTCATTTCCGTTGGCTGTGGGATCTTCCTCGGGATCC
rJMSF011O06- TCTTCATCATCATCGTCGCTGCCTTCATTTCCGTTGGCTGTGGGATCTTCCTCGGGATCC
JMFF040C08+ CGGGATCC
JMSF017L18+ TGGCTGTGGGATCTTCCTCGGGATCC
JMFF043K08+ TCTTCATCATCATCGTCGCTGCCTTCATTTCCGTTGGCTGTGGGATCTTCCTCGGGATCC
____________________________________________________________
consensus TCTTCATCATCATCGTCGCTGCCTTCATTTCCGTTGGCTGTGGGATCTTCCTCGGGATCC
. : . : . : . : . : . :
JMFN019J04+ CCTTCATCGTCATCATCTCCTCCCCCTTCTTCACCCGAGAAGTCTTCATCCCCAGCATCA
rJMFF040C08- CCTTCATCGTCATCATCTCCTCCCCCTTCTTCACCCGAGAAGTCTTCATCCCCAGCATCA
rJMSF017K18- CCTTCATCGTCATCATCTCCTCCCCCTTCTTCACCCGAGAAGTCTTCATCCCCAGCATCA
rJMSF017L18- CCTTCATCGTCATCATCTCCTCCCCCTTCTTCACCCGAGAAGTCTTCATCCCCAGCATCA
rJMFF043K08- CCTTCATCGTCATCATCTCCTCCCCCTTCTTCACCCGAGAAGTCTTCATCCCCAGCATCA
rJMSF011O06- CCTTCATCGTCATCATCTCCTCCCCCTTCTTCACCCGAGAAGTCTTCATCCCCAGCATCA
JMFF040C08+ CCTTCATCGTCATCATCTCCTCCCCCTTCTTCACCCGAGAAGTCTTCATCCCCAGCATCA
JMSF017L18+ CCTTCATCGTCATCATCTCCTCCCCCTTCTTCACCCGAGAAGTCTTCATCCCCAGCATCA
JMFF043K08+ CCTTCATCGTCATCATCTCCTCCCCCTTCTTCACCCGAGAAGTCTTCATCCCCAGCATCA
____________________________________________________________
consensus CCTTCATCGTCATCATCTCCTCCCCCTTCTTCACCCGAGAAGTCTTCATCCCCAGCATCA
. : . : . : . : . : . :
JMFN019J04+ TCATCATCCTGTTCATCGCCATCACCATCGTCATCTTCATCGTCATCCTCGGTATCACTG
rJMFF040C08- TCATCATCCTGTTCATCGCCATCACCATCGTCATCTTCATCGTCATCCTCGGTATCACTG
rJMSF017K18- TCATCATCCTGTTCATCGCCATCACCATCGTCATCTTCATCGTCATCCTCGGTATCACTG
rJMSF017L18- TCATCATCCTGTTCATCGCCATCACCATCGTCATCTTCATCGTCATCCTCGGTATCACTG
rJMFF043K08- TCATCATCCTGTTCATCGCCATCACCATCGTCATCTTCATCGTCATCCTCGGTATCACTG
rJMSF011O06- TCATCATCCTGTTCATCGCCATCACCATCGTCATCTTCATCGTCATCCTCGGTATCACTG
JMFF040C08+ TCATCATCCTGTTCATCGCCATCACCATCGTCATCTTCATCGTCATCCTCGGTATCACTG
JMSF017K18+ TCATCCTCGGTATCACTG
JMSF017L18+ TCATCATCCTGTTCATCGCCATCACCATCGTCATCTTCATCGTCATCCTCGGTATCACTG
JMFF043K08+ TCATCATCCTGTTCATCGCCATCACCATCGTCATCTTCATCGTCATCCTCGGTATCACTG
____________________________________________________________
consensus TCATCATCCTGTTCATCGCCATCACCATCGTCATCTTCATCGTCATCCTCGGTATCACTG
. : . : . : . : . : . :
JMFN019J04+ CCATCTTTATTCTC
rJMFF040C08- CCATCTTTATTCTCAACCTCAGCTTCGTTCTTTTTGTGGAGCTCCTCAAAGGGAAACCTT
rJMSF017K18- CCATCTTTATTCTCAACCTCAGCTTCGTTCTTTTTGTGGAGCTCCTCAAAGGGAAACCTT
rJMSF017L18- CCATCTTTATTCTCAACCTCAGCTTCGTTCTTTTTGTGGAGCTCCTCAAAGGGAAACCTT
rJMFF043K08- CCATCTTTATTCTCAACCTCAGCTTCGTTCTTTTTGTGGAGCTCCTCAAAGGGAAACCTT
rJMSF011O06- CCATCTTTATTCTCAACCTCAGCTTCGTTCTTTTTGTGGAGCTCCTCAAAGGGAAACCTT
JMFF040C08+ CCATCTTTATTCTCAACCTCAGCTTCGTTCTTTTTGTGGAGCTCCTCAAAGGGAAACCTT
JMSF017K18+ CCATCTTTATTCTCAACCTCAGCTTCGTTCTTTTTGTGGAGCTCCTCAAAGGGAAACCTT
JMSF017L18+ CCATCTTTATTCTCAACCTCAGCTTCGTTCTTTTTGTGGAGCTCCTCAAAGGGAAACCTT
JMFF043K08+ CCATCTTTATTCTCAACCTCAGCTTCGTTCTTTTTGTGGAGCTCCTCAAAGGGAAACCTT
____________________________________________________________
consensus CCATCTTTATTCTCAACCTCAGCTTCGTTCTTTTTGTGGAGCTCCTCAAAGGGAAACCTT
. : . : . : . : . : . :
rJMFF040C08- TGTTCCACCCCTGACAGATCTGGCAATGCACCATTGTTCCTCAGAAGGCATCCCGTCAGT
rJMSF017K18- TGTTCCACCCCTGACAGATCTGGCAATGCACCATTGTTCCTCAGAAGGCATCCCGTCAGT
rJMSF017L18- TGTTCCACCCCTGACAGATCTGGCAATGCACCATTGTTCCTCAGAAGGCATCCCGTCAGT
rJMFF043K08- TGTTCCACCCCTGACAGATCTGGCAATGCACCATTGTTCCTCAGAAGGCATCCCGTCAGT
rJMSF011O06- TGTTCCACCCCTGACAGATCTGGCAATGCACCATTGTTCCTCAGAAGGCATCCCGTCAGT
JMFF040C08+ TGTTCCACCCCTGACAGATCTGGCAATGCACCATTGTTCCTCAGAAGGCATCCCGTCAGT
JMSF017K18+ TGTTCCACCCCTGACAGATCTGGCAATGCACCATTGTTCCTCAGAAGGCATCCCGTCAGT
JMSF017L18+ TGTTCCACCCCTGACAGATCTGGCAATGCACCATTGTTCCTCAGAAGGCATCCCGTCAGT
JMSF011O06+ ATCTGGCAATGCACCATTGTTCCTCAGAAGGCATCCCGTCAGT
JMFF043K08+ TGTTCCACCCCTGACAGATCTGGCAATGCACCATTGTTCCTCAGAAGGCATCCCGTCAGT
____________________________________________________________
consensus TGTTCCACCCCTGACAGATCTGGCAATGCACCATTGTTCCTCAGAAGGCATCCCGTCAGT
. : . : . : . : . : . :
rJMFF040C08- ATGAACAGACAGGCAACAGATCTCTGAGCAACCAAAAGGGTCTCAGCAACCACAGCTTCC
rJMSF017K18- ATGAACAGACAGGCAACAGATCTCTGAGCAACCAAAAGGGTCTCAGCAACCACAGCTTCC
rJMSF017L18- ATGAACAGACAGGCAACAGATCTCTGAGCAACCAAAAGGGTCTCAGCAACCACAGCTTCC
rJMFF043K08- ATGAACAGAC-GGCAACAGATCTCTGAGCAAC
rJMSF011O06- ATGAACAGACAGGCAACAGATCTCTGAGCAACCAAAAGGGTCTCAGCAACCACAGCTTCC
JMFF040C08+ ATGAACAGACAGGCAACAGATCTNTGAGCAACCAAAAGGGTCTCAGCAACCACAGCTTCC
JMSF017K18+ ATGAACAGACAGGCAACAGATNTNTGAGCAACCAAAAGGGTNTCAGCAACCACAGCTTCC
JMSF017L18+ ATGAACAGACAGGCAACAGATCTNTGAGCAACCAAAAGGGTNTCAGCAACCACAGCTTCC
JMSF011O06+ ATGAACAGACAGGCAACAGATCTCTGAGCAACCAAAAGGGTCTCAGCAACCACAGCTTCC
JMFF043K08+ ATGAACAGACAGGCAACAGATCTCTGAGCAACCAAAAGGGTCTCAGCAACCACAGCTTCC
____________________________________________________________
consensus ATGAACAGACAGGCAACAGATCTCTGAGCAACCAAAAGGGTCTCAGCAACCACAGCTTCC
. : . : . : . : . : . :
rJMFF040C08- AACACAGACATCACCACAGTTTCCGTCAGGGCAGGCACTTCTGAGCTCAAACCACCCACC
rJMSF017K18- AACACAGACATCACCACAGTTTCCGTCAGGGCAGGCACTTCTGAGCTCAAACCACCCACC
rJMSF017L18- AACACAGACATCACCACAGTTTCCGTCAGGGCAGGCACTTCTGAGCTCAAACCACCCACC
rJMSF011O06- AACACAGACATCACCACAGTTTCCGTCAGGGCAGGCACTTCTGAGCTCAAACCACCCACC
JMFF040C08+ AACACAGACATCACCACAGTTTCCGTCAGGGCAGGCACTTCTGAGCTCAAACCACCCACC
JMSF017K18+ AACACAGACATCACCACAGTTTCCGTCAGGGCAGGCACTTNTGAGCTCAAACCACCCACC
JMSF017L18+ AACACAGACATCACCACAGTTTCCGTCAGGGCAGGCACTTNTGAGCTCAAACCACCCACC
JMSF011O06+ AACACAGACATCACCACAGTTTCCGTCAGGGCAGGCACTTNTGAGCTCAAACCACCCACC
JMFF043K08+ AACACAGACATCACCACAGTTTCCGTCAGGGCAGGCACTTCTGAGCTCAAACCA-CCACC
____________________________________________________________
consensus AACACAGACATCACCACAGTTTCCGTCAGGGCAGGCACTTCTGAGCTCAAACCACCCACC
. : . : . : . : . : . :
rJMFF040C08- TCCATTGCTTTAAAAA
rJMSF017K18- TCCATTGCTTTAAAAAAAAATAGGGAAAATAATCTGCC
rJMSF017L18- TCCATTGCTTTAAAAAAAAATAGGGAAAATAATCTGCCAAA
rJMSF011O06- TCCATTGCTTTAAAAAAAAATAGGGAAAATAATCTGCCAAAATTAC
JMFF040C08+ TCCATTGCTTTAAAAAAAAATAGGGAAAATAATCTGCCAAAATTACAGAAAAAAGTGAAG
JMSF017K18+ TCCATTGCTTTAAAAAAAAATAGGGAAAATAATCTGCCAAAATTACAGAAAAAAGTGAAG
JMSF017L18+ TCCATTGCTTTAAAAAAAAATAGGGAAAATAATCTGCCAAAATTACAGAAAAAAGTGAAG
JMSF011O06+ TCCATTGCTTTAAAAAAAAATAGGGAAAATAATCTGCCAAAATTACAGAAAAAAGTGAAG
JMFF043K08+ TCCATTGCTTTAAAAAAAAATAGGGAAAATAATCTGCCAAAATTACAGAAAAAAGTGAAG
____________________________________________________________
consensus TCCATTGCTTTAAAAAAAAATAGGGAAAATAATCTGCCAAAATTACAGAAAAAAGTGAAG
. : . : . : . : . : . :
JMFF040C08+ AGAGAGAAAGAGAAATTTAGAGAGAGAGAAACAGAGCGGTGAGGACAGGGGGAGC
JMSF017K18+ AGAGAGAAAGAGAAATTTAGAGAGAGAGAAACAGAGCGGTGAGGACAGGGGGAGCGC
JMSF017L18+ AGAGAGAAAGAGAAATTTAGAGAGAGAGAAACAGAGCGGTGAGGACAGGGGGAGCGC
JMSF011O06+ AGAGAGAAAGAGAAATTTAGAGAGAGAGAAACAGAGCGGTGAGGACAGGGGGAGCGC
JMFF043K08+ AGAGAGAAAGAGAAATTTAGAGAGAGAGAAACAGAGCGGTGAGGACAGGGGGAGCGCCCG
____________________________________________________________
consensus AGAGAGAAAGAGAAATTTAGAGAGAGAGAAACAGAGCGGTGAGGACAGGGGGAGCGCCCG