clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF039P05 | Sequence | 405 | 013215 (9) | emb|CDP02629.1| | 2e-11 | unnamed protein product [Coffea canephora] | 734 | 013215 (9) | ref|XP_009781342.1| | 1e-25 | PREDICTED: 60S ribosomal protein L23a-like [Nicotiana sylvestris] |
JMFN006I06 | Sequence | 610 | 013215 (9) | ref|XP_009589484.1| | 3e-13 | PREDICTED: 60S ribosomal protein L23a-like [Nicotiana tomentosiformis] | |||||
JMSF002D22 | Sequence | 346 | 013215 (9) | 723 | 013215 (9) | ref|XP_009781342.1| | 8e-26 | PREDICTED: 60S ribosomal protein L23a-like [Nicotiana sylvestris] | |||
JMSF003K09 | Sequence | 481 | 013215 (9) | 718 | 013215 (9) | ref|XP_009781342.1| | 8e-26 | PREDICTED: 60S ribosomal protein L23a-like [Nicotiana sylvestris] | |||
JMSF009N18 | Sequence | 340 | 013215 (9) | 722 | 013215 (9) | ref|XP_009781342.1| | 2e-25 | PREDICTED: 60S ribosomal protein L23a-like [Nicotiana sylvestris] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig013215============================================ 886 6 ------------------------------------->JMSF009N18 <-------------------------------------------------------------------------------rJMSF009N18 22 ------------------------------------------------------>JMSF003K09 <-----------------------------------------------------------------------------rJMSF003K09 66 -------------------------------------->JMSF002D22 <--------------------------------------------------------------------------------rJMSF002D22 242 --------------------------------------------->JMFF039P05 <--------------------------------------------------------------------------------rJMFF039P05
The following clones don't have the opposite end in this pair.
----------------------------------------------------------------->JMFN006I06-