clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF039F04 | Sequence | 602 | 001805 (9) | emb|CDP06865.1| | 5e-91 | unnamed protein product [Coffea canephora] | 699 | 001805 (9) | emb|CDP06865.1| | 2e-90 | unnamed protein product [Coffea canephora] |
JMFF040P13 | Sequence | 484 | 001805 (9) | emb|CDP06865.1| | 8e-85 | unnamed protein product [Coffea canephora] | 716 | 001805 (9) | emb|CDP06865.1| | 1e-90 | unnamed protein product [Coffea canephora] |
JMFF046A07 | Sequence | 628 | 001805 (9) | emb|CDP06865.1| | 5e-91 | unnamed protein product [Coffea canephora] | 584 | 001805 (9) | emb|CDP06865.1| | 9e-84 | unnamed protein product [Coffea canephora] |
JMFF051H04 | Sequence | 467 | 001805 (9) | gb|KDO70570.1| | 3e-55 | hypothetical protein CISIN_1g031715mg [Citrus sinensis] | 634 | 001805 (9) | gb|AGZ15402.1| | 6e-26 | ubiquitin conjugating enzyme/ubiquitin-like activating enzyme [Phaseolus vulgar |
JMFN011D10 | Sequence | 611 | 001805 (9) | emb|CDP06865.1| | 7e-91 | unnamed protein product [Coffea canephora] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig001805============================================ 797 1 ---------------------------------------------------------->JMFF051H04 <--------------------------------------------------------------rJMFF051H04 102 --------------------------------------------------------------------------->JMFF039F04 <--------------------------------------------------------------------------------------rJMFF039F04 169 -------------------------------------------------------------------->JMFF046A07 <-------------------------------------------------------------------------rJMFF046A07 273 ------------------------------------------------------------>JMFF040P13 <---------------------------------------------------------rJMFF040P13
The following clones don't have the opposite end in this pair.
--------------------------------------------------------------------------->JMFN011D10-