| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF039F04 | Sequence | 602 | 001805 (9) | emb|CDP06865.1| | 5e-91 | unnamed protein product [Coffea canephora] | 699 | 001805 (9) | emb|CDP06865.1| | 2e-90 | unnamed protein product [Coffea canephora] |
| JMFF040P13 | Sequence | 484 | 001805 (9) | emb|CDP06865.1| | 8e-85 | unnamed protein product [Coffea canephora] | 716 | 001805 (9) | emb|CDP06865.1| | 1e-90 | unnamed protein product [Coffea canephora] |
| JMFF046A07 | Sequence | 628 | 001805 (9) | emb|CDP06865.1| | 5e-91 | unnamed protein product [Coffea canephora] | 584 | 001805 (9) | emb|CDP06865.1| | 9e-84 | unnamed protein product [Coffea canephora] |
| JMFF051H04 | Sequence | 467 | 001805 (9) | gb|KDO70570.1| | 3e-55 | hypothetical protein CISIN_1g031715mg [Citrus sinensis] | 634 | 001805 (9) | gb|AGZ15402.1| | 6e-26 | ubiquitin conjugating enzyme/ubiquitin-like activating enzyme [Phaseolus vulgar |
| JMFN011D10 | Sequence | 611 | 001805 (9) | emb|CDP06865.1| | 7e-91 | unnamed protein product [Coffea canephora] | |||||
This contig is upended
. : . : . : . : . : . :
rJMFF051H04- TTTTTTTTTTTTTTTCA
____________________________________________________________
consensus TTTTTTTTTTTTTTTCA
. : . : . : . : . : . :
rJMFF051H04- CTCXXXXXXXXXXXXXXXXXXXXXXXXXXAAGCACAACATAATCCTAGTACCAATCTACG
rJMFF046A07- ACG
rJMFF039F04- ACG
____________________________________________________________
consensus CTCNNNNNNNNNNNNNNNNNNNNNNNNNNAAGCACAACATAATCCTAGTACCAATCTACG
. : . : . : . : . : . :
rJMFF051H04- TCAACATTGGGGCAACTGAACAAAACATAAAACATNAAAAGAGTCGGAAGAAAGTAATGA
rJMFF046A07- TCAACATTGGTGCAACTGAACATAACATAAAACATCAAAAGAGTCGGAAGAGAGTAATGA
rJMFF039F04- TCAACATTGGTGCAACTGAACATAACATAAAACATCAAAAGAGTCGGAAGAGAGTAATGA
____________________________________________________________
consensus TCAACATTGGTGCAACTGAACATAACATAAAACATCAAAAGAGTCGGAAGAGAGTAATGA
. : . : . : . : . : . :
rJMFF051H04- AACCTGTTCCAAGACCCATGGAGGTCGGTCCATAAACTTAACTTTGACTAGGGCTCACAA
JMFF039F04+ TCCATAAACTTAACTTTGACTAGGGCTCACAA
JMFN011D10+ CATGTTCCAAGACCCATGGAGGTCGGTCCATAAACTTAACTTTGACTAGGGCTCACAA
rJMFF046A07- AACATGTTCCAAGACCCATGGAGGTCGGTCCATAAACTTAACTTTGACTAGGGCTCACAA
JMFF046A07+ GGAGGTCGGTCCATAAACTTAACTTGACTAGGGGCTCACAA
rJMFF039F04- AACATGTTCCAAGACCCATGGAGGTCGGTCCATAAACTTAACTTTGACTAGGGCTCACAA
____________________________________________________________
consensus AACATGTTCCAAGACCCATGGAGGTCGGTCCATAAACTTAACTTTGACTAGGGCTCACAA
. : . : . : . : . : . :
rJMFF051H04- TTGAAACTATTTACGGGTATATGAGAAACTGGGCAGCTTTTCTAGCTTGCAGCTTAAGCG
JMFF039F04+ TTGAAACTATTTACGGGTATATGAGAAACTGTGCAGCTTTTCTAGCTTGCAGCTTAAGCG
JMFN011D10+ TTGAAACTATTTACGGGTATATGAGAAACTGTGCAGCTTTTCTAGCTTGCAGCTTAAGCG
rJMFF046A07- TTGAAACTATTTACGGGTATATGAGAAACTGTGCAGCTTTTCTAGCTTGCAGCTTAAGCG
JMFF046A07+ TTGAAACTATNTACGGGTATATGAGAAACTGTGCAGCTTTTCTAGCTTGCAGCTTAAGCG
rJMFF040P13- CTTGCAGCTTAAGCG
rJMFF039F04- TTGAAACTATTTACGGGTATATGAGAAACTGTGCAGCTTTTCTAGCTTGCAGCTTAAGCG
____________________________________________________________
consensus TTGAAACTATTTACGGGTATATGAGAAACTGTGCAGCTTTTCTAGCTTGCAGCTTAAGCG
. : . : . : . : . : . :
rJMFF051H04- ATCAAAAAAAGGTACCTTCTGGGGGCTGAACAACCTTTCGGTTATGCGGCGCACCCATCT
JMFF039F04+ ATCAGAAAAAGGTACCTTCTGGGGGCTGAACAAGCTTTCGGTTATGCGGCGCACCCATCT
JMFN011D10+ ATCAGAAAAAGGTACCTTCTGGGGGCTGAACAAGCTTTCGGTTATGCGGCGCACCCATCT
rJMFF046A07- ATCAGAAAAAGGTACCTTCTGGGGGCTGAACAAGCTTTCGGTTATGCGGCGCACCCATCT
JMFF046A07+ ATCAGAAAAAGGTACCTTCTGGGGGCTGAACAAGCTTTCGGTTATGCGGCGCACCCATCT
JMFF040P13+ TGAACAAGCTTTCGGTTATGCGGCGCACCCATCT
rJMFF040P13- ATCAGAAAAAGGTACCTTCTGGGGGCTGAACAAGCTTTCGGTTATGCGGCGCACCCATCT
rJMFF039F04- ATCAGAAAAAGGTACCTTCTGGGGGCTGAACAAGCTTTCGGTTATGCGGCGCACCCATCT
____________________________________________________________
consensus ATCAGAAAAAGGTACCTTCTGGGGGCTGAACAAGCTTTCGGTTATGCGGCGCACCCATCT
. : . : . : . : . : . :
rJMFF051H04- CTTTTCTCAACTGAAACAAGATGTCTTCCCTCCGAGCACTCTCGCTGCCAATTCCCCAGA
JMFF039F04+ CTTTTCTCAACTGACTCAAGATGTCTTCCAT-CGTGCACTCTCGCTGCCAATTCGCCAGC
JMFN011D10+ CTTTTCTCAACTGACTCAAGATGTCTTCCAT-CGTGCACTCTCGCTGCCAATTCGCCAGC
rJMFF046A07- CTTTTCTCAACTGACTCAAGATGTCTTCCAT-CGTGCACTCTCGCTGCCAATTCGCCAGC
JMFF046A07+ CTTTTCTCAACTGACTCAAGATGTCTTCCAT-CGTGCACTCTCGCTGCCAATTCGCCAGC
JMFF040P13+ CTTTTCTCAACTGACTCAAGATGTCTTCCAT-CGTGCACTCTCGCTGCCAATTCGCCAGC
rJMFF040P13- CTTTTCTCAACTGACTCAAGATGTCTTCCAT-CGTGCACTCTCGCTGCCAATTCGCCAGC
rJMFF039F04- CTTTTCTCAACTGACTCAAGATGTCTTCCAT-CGTGCACTCTCGCTGCCAATTCGCCAGC
JMFF051H04+ GACTCAAGATGTCTTCCAT-CGTGCACTCTCGCTGCCAATTCGCCAGC
____________________________________________________________
consensus CTTTTCTCAACTGACTCAAGATGTCTTCCAT-CGTGCACTCTCGCTGCCAATTCGCCAGC
. : . : . : . : . : . :
rJMFF051H04- AAACCGAACTTCTTGCCTTCAAACACTCCAGTCTC-GGGGTTCACACAGGTCCAGTTAAT
JMFF039F04+ ATACCGAACTTCTTGCCTTCAACCACTCCAGTCTC-GGGGTTCACACAGGTCAAGTTAAT
JMFN011D10+ ATACCGAACTTCTTGCCTTCAACCACTCCAGTCTC-GGGGTTCACACAGGTCAAGTTAAT
rJMFF046A07- ATACCGAACTTCTTGCCTTCAACCACTCCAGTCTC-GGGGTTCACACAGGTCAAGTTAAT
JMFF046A07+ ATACCGAACTTCTTGCCTTCAACCACTCCAGTCTC-GGGGTTCACACAGGTCAAGTTAAT
JMFF040P13+ ATACCGAACTTCTTGCCTTCAACCACTCCAGTCTC-GGGGTTCACACAGGTCAAGTTAAT
rJMFF040P13- ATACCGAACTTCTTGCCTTCAACCACTCCAGTCTC-GGGGTTCACACAGGTCAAGTTAAT
rJMFF039F04- ATACCGAACTTCTTGCCTTCAACCACTCCAGTCTC-GGGGTTCACACAGGTCAAGTTAAT
JMFF051H04+ ATACCGAGCTTCTTGCCTTCAACCACTCCAGTCTCGGGGGTTCACACAGGTCAAGTTAAT
____________________________________________________________
consensus ATACCGAACTTCTTGCCTTCAACCACTCCAGTCTC-GGGGTTCACACAGGTCAAGTTAAT
. : . : . : . : . : . :
rJMFF051H04- CGCTGAGTAAAAACGGAAAGACGGGGGCTTTCCTGGAAAGCCTTTGTCACAAAACACCTT
JMFF039F04+ GCGTGAGTGAAAACGGACAGACGGTGGCTTTTCTGGATAGTCTTTGTCACAAAACAGCTT
JMFN011D10+ GCGTGAGTGAAAACGGACAGACGGTGGCTTTTCTGGATAGTCTTTGTCACAAAACAGCTT
rJMFF046A07- GCGTGAGTGAAAACGGACAGACGGTGGCTTTTCTGGATAGTCTTTGTCACAAAACAGCTT
JMFF046A07+ GCGTGAGTGAAAACGGACAGACGGTGGCTTTTCTGGATAGTCTTTGTCACAAAACAGCTT
JMFF040P13+ GCGTGAGTGAAAACGGACAGACGGTGGCTTTTCTGGATAGTCTTTGTCACAAAACAGCTT
rJMFF040P13- GCGTGAGTGAAAACGGACAGACGGTGGCTTTTCTGGATAGTCTTTGTCACAAAACAGCTT
rJMFF039F04- GCGTGAGTGAAAACGGACAGACGGTGGCTTTTCTGGATAGTCTTTGTCACAAAACAGCTT
JMFF051H04+ GCGTGAGTGAAAACGGACAGACGGTGGCTTTTCTGGATAGTCTTTGTCACAAAACAGCTT
____________________________________________________________
consensus GCGTGAGTGAAAACGGACAGACGGTGGCTTTTCTGGATAGTCTTTGTCACAAAACAGCTT
. : . : . : . : . : . :
rJMFF051H04- CCGTTGA
JMFF039F04+ CAGTTGATAAATGCGTCCCTCATGTACAGTATTGTGCGGACCAATTATGGTACCCGTCCA
JMFN011D10+ CAGTTGATAAATGCGTCCCTCATGTACAGTATTGTGCGGACCAATTATGGTACCCGTCCA
rJMFF046A07- CAGTTGATAAATGCGTCCCTCATGTACAGTATTGTGCGGACCAATTATGGTACCCGTCCA
JMFF046A07+ CAGTTGATAAATGCGTCCCTCATGTACAGTATTGTGCGGACCAATTATGGTACCCGTCCA
JMFF040P13+ CAGTTGATAAATGCGTCCCTCATGTACAGTATTGTGCGGACCAATTATGGTACCCGTCCA
rJMFF040P13- CAGTTGATAAATGCGTCCCTCATGTACAGTATTGTGCGGACCAATTATGGTACCCGTCCA
rJMFF039F04- CAGTTGATAAATGCGTCCCTCATGTACAGTATTGTGCGGACCAATTATGGTACCCGTCCA
JMFF051H04+ CAGTTGATAAATGCGTCCCTCATGTACAGTATTGTGCGGACCAATTATGGTACCCGTCCA
____________________________________________________________
consensus CAGTTGATAAATGCGTCCCTCATGTACAGTATTGTGCGGACCAATTATGGTACCCGTCCA
. : . : . : . : . : . :
JMFF039F04+ AGAACGCATGTAAATATCATCAGCATCATCCATTCCATAGCTAACAGAACCATCTCCAAT
JMFN011D10+ AGAACGCATGTAAATATCATCAGCATCATCCATTCCATAGCTAACAGAACCATCTCCAAT
rJMFF046A07- AGAACGCATGTAAATATCATCAGCATCATCCATTCCATAGCTAACAGAACCATCTCCAAT
JMFF046A07+ AGAACGCATGTAAATATCATCAGCATCATCCATTCCATAGCTAACAGAACCATCTCCAAT
JMFF040P13+ AGAACGCATGTAAATATCATCAGCATCATCCATTCCATAGCTAACAGAACCATCTCCAAT
rJMFF040P13- AGAACGCATGTAAATATCATCAGCATCATCCATTCCATAGCTAACAGAACCATCTCCAAT
rJMFF039F04- AGAACGCATGTAAATATCATCAGCATCATCCATTCCATAGCTAACAGAACCATCTCCAAT
JMFF051H04+ AGAACGCATGTAAATATCATCAGCATCATCCATTCCATAGCTAACAGAACCATCTCCAAT
____________________________________________________________
consensus AGAACGCATGTAAATATCATCAGCATCATCCATTCCATAGCTAACAGAACCATCTCCAAT
. : . : . : . : . : . :
JMFF039F04+ ACCTTTCTCCCCACGTTCAAGCTCCTCAAGCAACCTAAAATTCCGAGGGACAACAACCCT
JMFN011D10+ ACCTTTCTCCCCACGTTCAAGCTCCTCAAGCAACCTAAAATTCCGAGGGACAACAACCCT
rJMFF046A07- ACCTTTCTCCCCACGTTCAAGCTCCTCAAGCAACCTAAAATTC
JMFF046A07+ ACCTTTCTCCCCACGTTCAAGCTCCTCAAGCAACCTAAAATTCCGAGGGACAACAACCCT
JMFF040P13+ ACCTTTCTCCCCACGTTCAAGCTCCTCAAGCAACCTAAAATTCCGAGGGACAACAACCCT
rJMFF040P13- ACCTTTCTCCCCACGTTCAAGCTCCTCAAGCAACCTAAAATTCCGAGGGACAACAACCCT
rJMFF039F04- ACCTTTCTCCCCACGTTCAAGCTCCTCAAGCAACCTAAAATTCCGAGGGACAACAACCCT
JMFF051H04+ ACCTTTCTCCCCACGTTCAAGCTCCTCAAGCAACCTAAAATTCCGAGGGACAACAACCCT
____________________________________________________________
consensus ACCTTTCTCCCCACGTTCAAGCTCCTCAAGCAACCTAAAATTCCGAGGGACAACAACCCT
. : . : . : . : . : . :
JMFF039F04+ AGATCCTCCTGCACCGAGTGTCATTATCTGGAATAGAGATTACAGATATAAAGATCAAAC
JMFN011D10+ AGATCCTCCTGCACCGAGTGTCATTATCTGGAATAGAGATTACAGATATAAAGATCAAAC
JMFF046A07+ AGATCCTCCTGCACCGAGTGTCATT
JMFF040P13+ AGATCCTCCTGCACCGAGTGTCATTATCTGGAATAGAGATTACAGATATAAAGATCAAAC
rJMFF040P13- AGATCCTCCTGCACCGAGTGTCATT
rJMFF039F04- AGATCCTCCTGCACCGAGTGTCATTATCTGGAATAGAGATTACAGATATAAAGATCAAAC
JMFF051H04+ AGATCCTCCTGCACCGAGTGTCATTATCTGGAATAGAGATTACAGATATAAAGATCAAAC
____________________________________________________________
consensus AGATCCTCCTGCACCGAGTGTCATTATCTGGAATAGAGATTACAGATATAAAGATCAAAC
. : . : . : . : . : . :
JMFF039F04+ CTTTGAAGAGTTTCCTGGAGATAACGCAATGT
JMFN011D10+ CTTT
JMFF040P13+ CTTTGAAGAGTTTCCTGGAGATAACGCAA
rJMFF039F04- CTTTGAAGAGTTTCCTGGAGATAACGCAATGT
JMFF051H04+ CTTTGAAGAGTTTCCTGGAGATAACGCAATGTAAAATTGACTTCTGAGGAAAAATAATAT
____________________________________________________________
consensus CTTTGAAGAGTTTCCTGGAGATAACGCAATGTAAAATTGACTTCTGAGGAAAAATAATAT