clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF003G02 | Sequence | 592 | 002849 (8) | ref|XP_009792594.1| | 7e-58 | PREDICTED: beta carbonic anhydrase 5, chloroplastic-like isoform X1 [Nicotiana | 785 | 002849 (8) | ref|XP_009792595.1| | 5e-112 | PREDICTED: beta carbonic anhydrase 5, chloroplastic-like isoform X2 [Nicotiana |
JMFF026C02 | Sequence | 591 | 002849 (8) | emb|CDO97393.1| | 4e-77 | unnamed protein product [Coffea canephora] | 737 | 002849 (8) | ref|XP_009792595.1| | 5e-103 | PREDICTED: beta carbonic anhydrase 5, chloroplastic-like isoform X2 [Nicotiana |
JMFF039N11 | Sequence | 584 | 002849 (8) | ref|XP_009792594.1| | 2e-57 | PREDICTED: beta carbonic anhydrase 5, chloroplastic-like isoform X1 [Nicotiana | 782 | 002849 (8) | ref|XP_011087942.1| | 3e-113 | PREDICTED: beta carbonic anhydrase 5, chloroplastic isoform X2 [Sesamum indicum |
JMSF022C07 | Sequence | 665 | 002849 (8) | emb|CDO97393.1| | 6e-89 | unnamed protein product [Coffea canephora] | 774 | 002849 (8) | ref|XP_011087942.1| | 4e-109 | PREDICTED: beta carbonic anhydrase 5, chloroplastic isoform X2 [Sesamum indicum |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig002849============================================1105 15 ----------------------------------------------------->JMFF003G02 <----------------------------------------------------------------------rJMFF003G02 23 ---------------------------------------------------->JMFF039N11 <---------------------------------------------------------------------rJMFF039N11 96 ----------------------------------------------------------->JMSF022C07 <---------------------------------------------------------------------rJMSF022C07 110 ---------------------------------------------------->JMFF026C02 <-----------------------------------------------------------------rJMFF026C02
The following clones don't have the opposite end in this pair.