| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF003G02 | Sequence | 592 | 002849 (8) | ref|XP_009792594.1| | 7e-58 | PREDICTED: beta carbonic anhydrase 5, chloroplastic-like isoform X1 [Nicotiana | 785 | 002849 (8) | ref|XP_009792595.1| | 5e-112 | PREDICTED: beta carbonic anhydrase 5, chloroplastic-like isoform X2 [Nicotiana |
| JMFF026C02 | Sequence | 591 | 002849 (8) | emb|CDO97393.1| | 4e-77 | unnamed protein product [Coffea canephora] | 737 | 002849 (8) | ref|XP_009792595.1| | 5e-103 | PREDICTED: beta carbonic anhydrase 5, chloroplastic-like isoform X2 [Nicotiana |
| JMFF039N11 | Sequence | 584 | 002849 (8) | ref|XP_009792594.1| | 2e-57 | PREDICTED: beta carbonic anhydrase 5, chloroplastic-like isoform X1 [Nicotiana | 782 | 002849 (8) | ref|XP_011087942.1| | 3e-113 | PREDICTED: beta carbonic anhydrase 5, chloroplastic isoform X2 [Sesamum indicum |
| JMSF022C07 | Sequence | 665 | 002849 (8) | emb|CDO97393.1| | 6e-89 | unnamed protein product [Coffea canephora] | 774 | 002849 (8) | ref|XP_011087942.1| | 4e-109 | PREDICTED: beta carbonic anhydrase 5, chloroplastic isoform X2 [Sesamum indicum |
This contig is upended
. : . : . : . : . : . :
JMFF039N11- TTTGTCCATTGTATAG
JMFF003G02- AGTTCATTGTTTGTCCATTGTATAG
____________________________________________________________
consensus AGTTCATTGTTTGTCCATTGTATAG
. : . : . : . : . : . :
JMFF039N11- GGATAAGGTCAAGGAAGCTTAGGGAATAAAGCTTTAAAGTTAGTTCTCATGCTACCAAAA
JMFF003G02- GGATAAGGTCAAGGAAGCTTAGGGAATAAAGCTTTAAAGTTAGTTCTCATGCTACCAAAA
____________________________________________________________
consensus GGATAAGGTCAAGGAAGCTTAGGGAATAAAGCTTTAAAGTTAGTTCTCATGCTACCAAAA
. : . : . : . : . : . :
JMFF039N11- GCTTCACTGTAGTTTTTGTGCTGCTTGAGGAAGGAGATATACTCATATACATATGCCATG
JMFF003G02- GCTTCACTGTAGTTTTTGTGCTGCTTGAGGAAGGAGATATACTCATATACATATGCCATG
JMFF026C02- GTTTTTGTGCTGCTTGAGGAAGGAGATATACTCATATACATATGCCATG
JMSF022C07- GTTTTTGTGCTGCTTGAGGAAGGAGATATACTCATATACATATGCCATG
____________________________________________________________
consensus GCTTCACTGTAGTTTTTGTGCTGCTTGAGGAAGGAGATATACTCATATACATATGCCATG
. : . : . : . : . : . :
JMFF039N11- CCATATTCGAGACTTGATCTGAGAAAATTAGCTTTAATGAGATGCAGGAATACGCTTGCT
JMFF003G02- CCATATTCGAGACTTGATCTGAGAAAATTAGCTTTAATGAGATGCAGGAATACGCTTGCT
JMFF026C02- CCATATTCGAGACTTGATCTGAGAAAATTAGCTTTAATGAGATGCAGGAATACGCTTGCT
JMSF022C07- CCATATTCGAGACTTGATCTGAGAAAATTAGCTTTAATGAGATGCAGGAATACGCTTGCT
____________________________________________________________
consensus CCATATTCGAGACTTGATCTGAGAAAATTAGCTTTAATGAGATGCAGGAATACGCTTGCT
. : . : . : . : . : . :
JMFF039N11- CTAAGGTTGAAATCCCCGAGGGAACCTATGGGCTTGACTCAGGAAATTGTTGGTGATGAA
JMFF003G02- CTAAGGTTGAAATCCCCGAGGGAACCTATGGGCTTGACTCAGGAAATTGTTGGTGATGAA
JMFF026C02- CTAAGGTTGAAATCCCCGAGGGAACCTATGGGCTTGACTCAGGAAATTGTTGGTGATGAA
JMSF022C07- CTAAGGTTGAAATCCCCGAGGGAACCTATGGGCTTGACTCAGGAAATTGTTGGTGATGAA
____________________________________________________________
consensus CTAAGGTTGAAATCCCCGAGGGAACCTATGGGCTTGACTCAGGAAATTGTTGGTGATGAA
. : . : . : . : . : . :
JMFF039N11- CAGAAAAGCACTGTTTTAACTCAAACCGCTTCTGATCTCTTCACTAAGATGAAGGATCGG
JMFF003G02- CAGAAAAGCACTGTTTTAACTCAAACCGCTTCTGATCTCTTCACTAAGATGAAGGATCGG
JMFF026C02- CAGAAAAGCACTGTTTTAACTCAAACCGCTTCTGATCTCTTCACTAAGATGAAGGATCGG
JMSF022C07- CAGAAAAGCACTGTTTTAACTCAAACCGCTTCTGATCTCTTCACTAAGATGAAGGATCGG
rJMFF039N11+ GATGAAGGATCGG
rJMFF003G02+ CTAAGATGAAGGATCGG
____________________________________________________________
consensus CAGAAAAGCACTGTTTTAACTCAAACCGCTTCTGATCTCTTCACTAAGATGAAGGATCGG
. : . : . : . : . : . :
JMFF039N11- TTTTTGAGCTTCAAAAAGGATAAGTACTTGGCCAATATAGAACACTTTAAGGAGCTTGCA
JMFF003G02- TTTTTGAGCTTCAAAAAGGATAAGTACTTGGCCAATATAGAACACTTTAAGGAGCTTGCA
JMFF026C02- TTTTTGAGCTTCAAAAAGGATAAGTACTTGGCCAATATAGAACACTTTAAGGAGCTTGCA
JMSF022C07- TTTTTGAGCTTCAAAAAGGATAAGTACTTGGCCAATATAGAACACTTTAAGGAGCTTGCA
rJMFF039N11+ TTTTTGAGCTTCAAAAAGGATAAGTACTTGGCCAATATAGAACACTTTAAGGAGCTTGCA
rJMFF003G02+ TTTTTGAGCTTCAAAAAGGATAAGTACTTGGCCAATATAGAACACTTTAAGGAGCTTGCA
rJMFF026C02+ CAATATAGANCACTTTAAGGAGCTTGCA
rJMSF022C07+ AGCTTCAAAAAGGATAAGTACNTGGCCAATATAGAACACTTTAAGGAGCTTGCA
____________________________________________________________
consensus TTTTTGAGCTTCAAAAAGGATAAGTACTTGGCCAATATAGAACACTTTAAGGAGCTTGCA
. : . : . : . : . : . :
JMFF039N11- ATTGCTCAAGAACCAAAGTTTATGGTGATTGCTTGCGCAGACTCTCGGGTTTGTCCCTCA
JMFF003G02- ATTGCTCAAGAACCAAAGTTTATGGTGATTGCTTGCGCAGACTCTCGGGTTTGTCCCTCA
JMFF026C02- ATTGCTCAAGAACCAAAGTTTATGGTGATTGCTTGCGCAGACTCTCGGGTTTGTCCCTCA
JMSF022C07- ATTGCTCAAGAACCAAAGTTTATGGTGATTGCTTGCGCAGACTCTCGGGTTTGTCCCTCA
rJMFF039N11+ ATTGCTCAAGAACCAAAGTTTATGGTGATTGCTTGCGCAGACTCTCGGGTTTGTCCCTCA
rJMFF003G02+ ATTGCTCAAGAACCAAAGTTTATGGTGATTGCTTGCGCAGACTCTCGGGTTTGTCCCTCA
rJMFF026C02+ ATTGCTCAAGAACCAAAGTTTATGGTGATTGCTTGCGCAGACTCTCGGGTTTGTCCCTCA
rJMSF022C07+ ATTGCTCAAGAACCAAAGTTTATGGTGATTGCTTGCGCAGACTCTCGGGTTTGTCCCTCA
____________________________________________________________
consensus ATTGCTCAAGAACCAAAGTTTATGGTGATTGCTTGCGCAGACTCTCGGGTTTGTCCCTCA
. : . : . : . : . : . :
JMFF039N11- GTTGTCCTGGGATTTCAACCTGGAGAAGCATTTGTAATCCGCAACATCGCAAATCTGGTG
JMFF003G02- GTTGTCCTGGGATTTCAACCTGGAGAAGCATTTGTAATCCGCAACATCGCAAATCTGGTG
JMFF026C02- GTTGTCCTGGGATTTCAACCTGGAGAAGCATTTGTAATCCGCAACATCGCAAATCTGGTG
JMSF022C07- GTTGTCCTGGGATTTCAACCTGGAGAAGCATTTGTAATCCGCAACATCGCAAATCTGGTG
rJMFF039N11+ GTTGTCCTGGGATTTCAACCTGGAGAAGCATTTGTAATCCGCAACATCGCAAATCTGGTG
rJMFF003G02+ GTTGTCCTGGGATTTCAACCTGGAGAAGCATTTGTAATCCGCAACATCGCAAATCTGGTG
rJMFF026C02+ GTTGTCCTGGGATTTCAACCTGGAGAAGCATTTGTAATCCGCAACATCGCAAATCTGGTG
rJMSF022C07+ GTTGTCCTGGGATTTCAACCTGGAGAAGCATTTGTAATCCGCAACATCGCAAATCTGGTG
____________________________________________________________
consensus GTTGTCCTGGGATTTCAACCTGGAGAAGCATTTGTAATCCGCAACATCGCAAATCTGGTG
. : . : . : . : . : . :
JMFF039N11- CCTTCTTATGAGAATGGCCCTTCAGAAGTAAATGCTGCTCTTGACTTTGCTGTTAACACC
JMFF003G02- CCTTCTTATGAGAATGGCCCTTCAGAAGTAAATGCTGCTCTTGACTTTGCTGTTAACACC
JMFF026C02- CCTTCTTATGAGAATGGCCCTTCAGAAGTAAATGCTGCTCTTGACTTTGCTGTTAACACC
JMSF022C07- CCTTCTTATGAGAATGGCCCTTCAGAAGTAAATGCTGCTCTTGACTTTGCTGTTAACACC
rJMFF039N11+ CCTTCTTATGAGAATGGCCCTTCAGAAGTAAATGCTGCTCTTGACTTTGCTGTTAACACC
rJMFF003G02+ CCTTCTTATGAGAATGGCCCTTCAGAAGTAAATGCTGCTCTTGACTTTGCTGTTAACACC
rJMFF026C02+ CCTTCTTATGAGAATGGCCCTTCAGAAGTAAATGCTGCTCTTGACTTTGCTGTTAACACC
rJMSF022C07+ CCTTCTTATGAGAATGGCCCTTCAGAAGTAAATGCTGCTCTTGACTTTGCTGTTAACACC
____________________________________________________________
consensus CCTTCTTATGAGAATGGCCCTTCAGAAGTAAATGCTGCTCTTGACTTTGCTGTTAACACC
. : . : . : . : . : . :
JMFF039N11- CTCTGTGTGGAAAATATACTGGTTGT
JMFF003G02- CTCTGTGTGGAAAATATACTGGTTGTT
JMFF026C02- CTCTGTGTGGAAAATATACTGGTTGTTGGCCATAGCTGCTGTGGGGGGATTCGTGCCTTG
JMSF022C07- CTCTGTGTGGAAAATATACTGGTTGTTGGCCATAGCTGCTGTGGGGGGATTCGTGCCTTG
rJMFF039N11+ CTCTGTGTGGAAAATATACTGGTTGTTGGCCATAGCTGCTGTGGGGGGATTCGTGCCTTG
rJMFF003G02+ CTCTGTGTGGAAAATATACTGGTTGTTGGCCATAGCTGCTGTGGGGGGATTCGTGCCTTG
rJMFF026C02+ CTCTGTGTGGAAAATATACTGGTTGTTGGCCATAGCTGCTGTGGGGGGATTCGTGCCTTG
rJMSF022C07+ CTCTGTGTGGAAAATATACTGGTTGTTGGCCATAGCTGCTGTGGGGGGATTCGTGCCTTG
____________________________________________________________
consensus CTCTGTGTGGAAAATATACTGGTTGTTGGCCATAGCTGCTGTGGGGGGATTCGTGCCTTG
. : . : . : . : . : . :
JMFF026C02- ATGAGTATGGAAGATGAGATGAATTCA---AGTTTTCTCCATAATTGGGTAGTTATTGGG
JMSF022C07- ATGAGTATGGAAGATGAGATGAATTCAAGTAGTTTTCTCCATAATTGGGTAGTTATTGGG
rJMFF039N11+ ATGAGTATGGAAGATGAGATGAATTCAAGTAGTTTTCTCCATAATTGGGTAGTTATTGGG
rJMFF003G02+ ATGAGTATGGAAGATGAGATGAATTCA---AGTTTTCTCCATAATTGGGTAGTTATTGGG
rJMFF026C02+ ATGAGTATGGAAGATGAGATGAATTCA---AGTTTTCTCCATAATTGGGTAGTTATTGGG
rJMSF022C07+ ATGAGTATGGAAGATGAGATGAATTCAAGTAGTTTTCTCCATAATTGGGTAGTTATTGGG
____________________________________________________________
consensus ATGAGTATGGAAGATGAGATGAATTCAAGTAGTTTTCTCCATAATTGGGTAGTTATTGGG
. : . : . : . : . : . :
JMFF026C02- AA
JMSF022C07- AAGAACGCGAGGTCTAACACAAAGGCCATTGCCTCCAAACTGAGCTTTGATGAGCAGTGC
rJMFF039N11+ AAGAACGCGAGGTCTAACACAAAGGCCATTGCCTCCAAACTGAGCTTTGATGAGCAGTGC
rJMFF003G02+ AAGAACGCGAGGTCTAACACAAAGGCCATTGCCTCCAAACTGAGCTTTGATGAGCAGTGC
rJMFF026C02+ AAGAACGCGAGGTCTAACACAAAGGCCATTGCCTCCAAACTGAGCTTTGATGAGCAGTGC
rJMSF022C07+ AAGAACGCGAGGTCTAACACAAAGGCCATTGCCTCCAAACTGAGCTTTGATGAGCAGTGC
____________________________________________________________
consensus AAGAACGCGAGGTCTAACACAAAGGCCATTGCCTCCAAACTGAGCTTTGATGAGCAGTGC
. : . : . : . : . : . :
JMSF022C07- AGGCACTGCGAG
rJMFF039N11+ AGGCACTGCGAGAAGGAGTCACTCCACCACTCGTTGTTGAACTTGCTTACATACCCGTGG
rJMFF003G02+ AGGCACTGCGAGAAGGAGTCACTCCACCACTCGTTGTTGAACTTGCTTACATACCCGTGG
rJMFF026C02+ AGGCACTGCGAGAAGGAGTCACTCCACCACTCGTTGTTGAACTTGCTTACATACCCGTGG
rJMSF022C07+ AGGCACTGCGAGAAGGAGTCACTCCACCACTCGTTGTTGAACTTGCTTACATACCCGTGG
____________________________________________________________
consensus AGGCACTGCGAGAAGGAGTCACTCCACCACTCGTTGTTGAACTTGCTTACATACCCGTGG
. : . : . : . : . : . :
rJMFF039N11+ ATAAAGAACAAGGTGGTGGAAGGTCAGCTTTTAATTCATGGTGGCTACTATGACTTTGTT
rJMFF003G02+ ATAAAGAACAAGGTGGTGGAAGGTCAGCTTTTAATTCATGGTGGCTACTATGACTTTGTT
rJMFF026C02+ ATAAAGAACAAGGTGGTGGAAGGTCAGCTTTTAATTCATGGTGGCTACTATGACTTTGTT
rJMSF022C07+ ATAAAGAACAAGGTGGTGGAAGGTCAGCTTTTAATTCATGGTGGCTACTATGACTTTGTT
____________________________________________________________
consensus ATAAAGAACAAGGTGGTGGAAGGTCAGCTTTTAATTCATGGTGGCTACTATGACTTTGTT
. : . : . : . : . : . :
rJMFF039N11+ GATTGTACATTTGAGAAATGGACTCTCGGGTATACGAAAAGCAGCTCTATGGTACACAAC
rJMFF003G02+ GATTGTACATTTGAGAAATGGACTCTCGGGTATACGAAAAGCAGCTCTATGGTACACAAC
rJMFF026C02+ GATTGTACATTTGAGAAATGGACTCTCGGGTATACGAAAAGCAGCTCTATGGTACACAAC
rJMSF022C07+ GATTGTACATTTGAGAAATGGACTCTCGGGTATACGAAAAGCAGCTCTATGGTACACAAC
____________________________________________________________
consensus GATTGTACATTTGAGAAATGGACTCTCGGGTATACGAAAAGCAGCTCTATGGTACACAAC
. : . : . : . : . : . :
rJMFF039N11+ CAATACTGTATAAAAAACCGCGAATTTTGGAGCTGACTAACTTACTCTCAGTTGCTCCAT
rJMFF003G02+ CAATACTGTATAAAAAACCGCGAATTTTGGAGCTGACTAACTTACTCTCAGTTGCTCCAT
rJMFF026C02+ CAATACTGTATAAAAAACCGCGAATTTTGGAGCTGACTAACTTACTCTCAGTTGCTCCAT
rJMSF022C07+ CAATACTGTATAAAAAACCGCGAATTTTGGAGCTGACTAACTTACTCTCAGTTGCTCCAT
____________________________________________________________
consensus CAATACTGTATAAAAAACCGCGAATTTTGGAGCTGACTAACTTACTCTCAGTTGCTCCAT
. : . : . : . : . : . :
rJMFF039N11+ TTATCATTCTTCGCTTTTAGATAGATTACAAGTTAATATAAAGCTCCTTGTGTCAACTTA
rJMFF003G02+ TTATCATTCTTCGCTTTTAGATAGATTACAAGTTAATATAAAGCTCCTTGTGTCAACTTA
rJMFF026C02+ TTATCATTCTTCGCTTTTAGATAGATTACAAGTTAATATAAAGCTCCTTGTGTCAACTTA
rJMSF022C07+ TTATCATTCTTCGCTTTTAGATAGATTACAAGTTAATATAAAGCTCCTTGTGTCAACTTA
____________________________________________________________
consensus TTATCATTCTTCGCTTTTAGATAGATTACAAGTTAATATAAAGCTCCTTGTGTCAACTTA
. : . : . : . : . : . :
rJMFF039N11+ GATATAGTAATACACTTGCATCAACTGTGAGCCATATATGTACTAA
rJMFF003G02+ GATATAGTAATACACTTGCATCAACTGTGAGCCATATATGTACTAA
rJMFF026C02+ GATATAGTAATACACTTGCATCAACTGTGAGCCATATATGTACTAA
rJMSF022C07+ GATATAGTAATACACTTGCATCAACTGTGAGCCATATATGTACTAATGAAAATGATTGTT
____________________________________________________________
consensus GATATAGTAATACACTTGCATCAACTGTGAGCCATATATGTACTAATGAAAATGATTGTT