clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF012J16 | Sequence | 639 | 011218 (12) | gb|KJB82126.1| | 6e-84 | hypothetical protein B456_013G177900 [Gossypium raimondii] gb|KJB82127.1| hypoth | 749 | 011218 (12) | emb|CDP13593.1| | 1e-114 | unnamed protein product [Coffea canephora] |
JMFF031J02 | Sequence | 577 | 011218 (12) | gb|KJB82126.1| | 3e-84 | hypothetical protein B456_013G177900 [Gossypium raimondii] gb|KJB82127.1| hypoth | 408 | 011218 (12) | ref|XP_002513401.1| | 3e-37 | conserved hypothetical protein [Ricinus communis] gb|EEF48804.1| conserved hypot |
JMFF048J18 | Sequence | 557 | 011218 (12) | ref|XP_006422203.1| | 4e-64 | hypothetical protein CICLE_v10005304mg [Citrus clementina] gb|ESR35443.1| hypoth | 430 | 011218 (12) | ref|XP_002513401.1| | 3e-37 | conserved hypothetical protein [Ricinus communis] gb|EEF48804.1| conserved hypot |
JMFF050I24 | Sequence | 615 | 011218 (12) | ref|XP_006422203.1| | 2e-50 | hypothetical protein CICLE_v10005304mg [Citrus clementina] gb|ESR35443.1| hypoth | 596 | 011218 (12) | ref|XP_002513401.1| | 1e-69 | conserved hypothetical protein [Ricinus communis] gb|EEF48804.1| conserved hypot |
JMSF036P17 | Sequence | 646 | 011218 (12) | gb|KJB82126.1| | 2e-86 | hypothetical protein B456_013G177900 [Gossypium raimondii] gb|KJB82127.1| hypoth | 691 | 011218 (12) | emb|CDP13593.1| | 2e-110 | unnamed protein product [Coffea canephora] |
JMSF044P04 | Sequence | 736 | 011218 (12) | gb|KJB82126.1| | 1e-106 | hypothetical protein B456_013G177900 [Gossypium raimondii] gb|KJB82127.1| hypoth | 700 | 011218 (12) | emb|CDP13593.1| | 4e-110 | unnamed protein product [Coffea canephora] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig011218============================================1348 1 --------------------------------->JMFF050I24 <-------------------------------------------rJMFF050I24 11 -------------------------------------->JMFF048J18 <-------------------------------rJMFF048J18 94 ---------------------------------------------->JMFF012J16 <----------------------------------------------------rJMFF012J16 96 ----------------------------------------------------->JMSF044P04 <--------------------------------------------------rJMSF044P04 100 ----------------------------------------------->JMSF036P17 <--------------------------------------------------rJMSF036P17 118 ----------------------------------------->JMFF031J02 <-----------------------------rJMFF031J02
The following clones don't have the opposite end in this pair.