| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF012J16 | Sequence | 639 | 011218 (12) | gb|KJB82126.1| | 6e-84 | hypothetical protein B456_013G177900 [Gossypium raimondii] gb|KJB82127.1| hypoth | 749 | 011218 (12) | emb|CDP13593.1| | 1e-114 | unnamed protein product [Coffea canephora] |
| JMFF031J02 | Sequence | 577 | 011218 (12) | gb|KJB82126.1| | 3e-84 | hypothetical protein B456_013G177900 [Gossypium raimondii] gb|KJB82127.1| hypoth | 408 | 011218 (12) | ref|XP_002513401.1| | 3e-37 | conserved hypothetical protein [Ricinus communis] gb|EEF48804.1| conserved hypot |
| JMFF048J18 | Sequence | 557 | 011218 (12) | ref|XP_006422203.1| | 4e-64 | hypothetical protein CICLE_v10005304mg [Citrus clementina] gb|ESR35443.1| hypoth | 430 | 011218 (12) | ref|XP_002513401.1| | 3e-37 | conserved hypothetical protein [Ricinus communis] gb|EEF48804.1| conserved hypot |
| JMFF050I24 | Sequence | 615 | 011218 (12) | ref|XP_006422203.1| | 2e-50 | hypothetical protein CICLE_v10005304mg [Citrus clementina] gb|ESR35443.1| hypoth | 596 | 011218 (12) | ref|XP_002513401.1| | 1e-69 | conserved hypothetical protein [Ricinus communis] gb|EEF48804.1| conserved hypot |
| JMSF036P17 | Sequence | 646 | 011218 (12) | gb|KJB82126.1| | 2e-86 | hypothetical protein B456_013G177900 [Gossypium raimondii] gb|KJB82127.1| hypoth | 691 | 011218 (12) | emb|CDP13593.1| | 2e-110 | unnamed protein product [Coffea canephora] |
| JMSF044P04 | Sequence | 736 | 011218 (12) | gb|KJB82126.1| | 1e-106 | hypothetical protein B456_013G177900 [Gossypium raimondii] gb|KJB82127.1| hypoth | 700 | 011218 (12) | emb|CDP13593.1| | 4e-110 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
JMFF050I24- CCGGATTTCTCATCTTTCGGACACTATG
JMFF012J16- GATTTCTCATCTTTCGGACACTATG
JMFF048J18- GATTTCTCATCTTTCGGACACTATG
JMSF036P17- GATTTCTCATCTTTCGGACACTATG
JMSF044P04- ATTTCTCATCTTTCGGACACTATG
____________________________________________________________
consensus CCGGATTTCTCATCTTTCGGACACTATG
. : . : . : . : . : . :
JMFF050I24- ACTTAGATGAAGAGTACTTGACTGTATTTTCTTATTTTGGAAGGCAATCCAATATCATTT
JMFF012J16- ACTTAGATGAAGAGTACTTGACTGTATTTTCTTATTTTGGAAGGCAATCCAATATCATTT
JMFF031J02- AATCCAATATCATTT
JMFF048J18- ACTTAGATGAAGAGTACTTGACTGTATTTTCTTATTTTGGAAGGCAATCCAATATCATTT
JMSF036P17- ACTTAGATGAAGAGTACTTGACTGTATTTTCTTATTTTGGAAGGCAATCCAATATCATTT
JMSF044P04- ACTTAGATGAAGAGTACTTGACTGTATTTTCTTATTTTGGAAGGCAATCCAATATCATTT
____________________________________________________________
consensus ACTTAGATGAAGAGTACTTGACTGTATTTTCTTATTTTGGAAGGCAATCCAATATCATTT
. : . : . : . : . : . :
JMFF050I24- CCAACTACAATCCAAAATGGGATGCTATTGTTGGACCACTCTCTTTGTTGTATTCTCATG
JMFF012J16- CCAACTACAATCCAAAATGGGATGCTATTGTTGGACCACTCTCTTTGTTGTATTCTCATG
JMFF031J02- CCAACTACAATCCAAAATGGGATGCTATTGTTGGACCACTCTCTTTGTTGTATTCTCATG
JMFF048J18- CCAACTACAATCCAAAATGGGATGCTATTGTTGGACCACTCTCTTTGTTGTATTCTCATG
JMSF036P17- CCAACTACAATCCAAAATGGGATGCTATTGTTGGACCACTCTCTTTGTTGTATTCTCATG
JMSF044P04- CCAACTACAATCCAAAATGGGATGCTATTGTTGGACCACTCTCTTTGTTGTATTCTCATG
____________________________________________________________
consensus CCAACTACAATCCAAAATGGGATGCTATTGTTGGACCACTCTCTTTGTTGTATTCTCATG
. : . : . : . : . : . :
JMFF050I24- TCTGATTGGAATGATTGATGCTAGTGCTGGTGACATTGATCCATCATATAGGGCTTGTGT
JMFF012J16- TCTGATTGGAATGATTGATGCTAGTGCTGGTGACATTGATCCATCATATAGGGCTTGTGT
JMFF031J02- TCTGATTGGAATGATTAATGCTAGTGCTGGTGACATTGATCCATCATATAGGGCTTGTGT
JMFF048J18- TCTGATTGGAATGATTGATGCTAGTGCTGGTGACATTGATCCATCATATAGGGCTTGTGT
JMSF036P17- TCTGATTGGAATGATTGATGCTAGTGCTGGTGACATTGATCCATCATATAGGGCTTGTGT
JMSF044P04- TCTGATTGGAATGATTGATGCTAGTGCTGGTGACATTGATCCATCATATAGGGCTTGTGT
____________________________________________________________
consensus TCTGATTGGAATGATTGATGCTAGTGCTGGTGACATTGATCCATCATATAGGGCTTGTGT
. : . : . : . : . : . :
JMFF050I24- TTCAGAATGCGAATTGACTGGATGTGCTGGGGGAAACTGTTTTCCACACTGCAAATTACT
JMFF012J16- TTCAGAATGCGAATTGACTGGATGTACTGGGGGAAACTGTTTTCCACACTGCAAATTACT
JMFF031J02- TTCAGAATGCGAATTGACTGGATGTGCTGGGGGAAACTGTTTTCCACACTGCAAATTACT
JMFF048J18- TTCAGAATGCGAATTGACTGGATTTGCTGGGGGAAACTGTTTTCCACACTGCAAATTACT
JMSF036P17- TTCAGAATGCGAATTGACTGGATGTGCTGGGGGAAACTGTTTTCCACACTGCAAATTACT
JMSF044P04- TTCAGAATGCGAATTGACTGGATGTGCTGGGGGAAACTGTTTTCCACACTGCAAATTACT
____________________________________________________________
consensus TTCAGAATGCGAATTGACTGGATGTGCTGGGGGAAACTGTTTTCCACACTGCAAATTACT
. : . : . : . : . : . :
JMFF050I24- TTCAGATGGTTCTTCCATTGGTGGTACTTGGTACATGCAAAAACATCTCTATCTGCAGTG
JMFF012J16- TTCAGATGGTTCTTCCATTGGTGGTACTTGGTACATGCAAAAACATCTCTATCTGCAGTG
JMFF031J02- TTCAGATGGTTCTTCCATTGGTGGTACTTGGTACATGCAAAAACATCTCTATCTGCAGTG
JMFF048J18- TTCAGATGGTTCTTCCGTTGGTGGTACTTGGTACATGCAAAAACATCTCTATCTGCAGTG
JMSF036P17- TTCAGATGGTTCTTCCATTGGTGGTACTTGGTACATGCAAAAACATCTCTATCTGCAGTG
JMSF044P04- TTCAGATGGTTCTTCCATTGGTGGTACTTGGTACATGCAAAAACATCTCTATCTGCAGTG
____________________________________________________________
consensus TTCAGATGGTTCTTCCATTGGTGGTACTTGGTACATGCAAAAACATCTCTATCTGCAGTG
. : . : . : . : . : . :
JMFF050I24- GAAACAATCAGGCTGCAAAGGTGATTGCCGATATCAGTGCATGATTGACAGAGAAAAGGA
JMFF012J16- GAAACAATCAGGCTGCAAAGGTGATTGCCGATATCAGTGCATGATTGACAGAGAAAAGGA
JMFF031J02- GAAACAATCAGGCTGCAAAGGTGATTGCCGATATCAGTGCATGATTGACAGAGAAAAGGA
JMFF048J18- GAAACAATCAGGCTGCAAAGGTGATTGCCGATATCAGTGCATGATTGACAGAGAAAAGGA
JMSF036P17- GAAACAATCAGGCTGCAAAGGTGATTGCCGATATCAGTGCATGATTGACAGAGAAAAGGA
JMSF044P04- GAAACAATCAGGCTGCAAAGGTGATTGCCGATATCAGTGCATGATTGACAGAGAAAAGGA
____________________________________________________________
consensus GAAACAATCAGGCTGCAAAGGTGATTGCCGATATCAGTGCATGATTGACAGAGAAAAGGA
. : . : . : . : . : . :
JMFF050I24- AAGAGCAGCACTTGGTTCAGAACCGGTCAAATACCATGGAAAATGGCCTTTCAAACGTCT
JMFF012J16- AAGAGCAGCACTTGGTTCAGAACCGGTCAAATACCATGGAAAATGGCCTTTCAAACGTCT
JMFF031J02- AAGAGCAGCACTTGGTTCAGAACCGGTCAAATACCATGGAAAATGGCCTTTCAAACGTCT
JMFF048J18- AAGAGCAGCACTTGGTTCAGAACCGGTCAAATACCATGGAAAATGGCCTTTCAAACGTCT
JMSF036P17- AAGAGCAGCACTTGGTTCAGAACCGGTCAAATACCATGGAAAATGGCCTTTCAAACGTCT
JMSF044P04- AAGAGCAGCACTTGGTTCAGAACCGGTCAAATACCATGGAAAATGGCCTTTCAAACGTCT
____________________________________________________________
consensus AAGAGCAGCACTTGGTTCAGAACCGGTCAAATACCATGGAAAATGGCCTTTCAAACGTCT
. : . : . : . : . : . :
JMFF050I24- CTTTGGGCTTCAGG
JMFF012J16- CTTTGGGCTTCAGGAGACCGTCTCTGTTGCATTTTCGGTGCTCAACCTTGCAATGCATTT
JMFF031J02- CTTTGGGCTTCAGGAGACCGTCTCTGTTGCATTTTCGGTGCTCAACCTTGCAATGCATTT
JMFF048J18- CTTTGGGCTTCAGGAGAACGTCTCTGTTGCATTTTCGGTGCTCAACCCTTGCATGCATTT
JMSF036P17- CTTTGGGCTTCAGGAGACCGTCTCTGTTGCATTTTCGGTGCTCAACCTTGCAATGCATTT
JMSF044P04- CTTTGGGCTTCAGGAGACCGTCTCTGTTGCATTTTCGGTGCTCAACCTTGCAATGCATTT
____________________________________________________________
consensus CTTTGGGCTTCAGGAGACCGTCTCTGTTGCATTTTCGGTGCTCAACCTTGCAATGCATTT
. : . : . : . : . : . :
JMFF012J16- CTACGGTTGGCTGTCCTTTTTCAAGCTTATTAAGTACAACTTGCCATTTAAAGCTGACAA
JMFF031J02- CTACGGTTGGCTGTCCTTTTTCAAGCTTATTAAGTACAACTTGCCATTTAAAGCTGACAA
JMFF048J18- CTACGGTTGGCTGTCCTTTTTCA
JMSF036P17- CTACGGTTGGCTGTCCTTTTTCAAGCTTATTAAGTACAACTTGCCATTTAAAGCTGACAA
JMSF044P04- CTACGGTTGGCTGTCCTTTTTCAAGCTTATTAAGTACAACTTGCCATTTAAAGCTGACAA
rJMSF036P17+ AAAGCTGACAA
rJMFF012J16+ ATTAAGTACAACTTGCCATTTAAAGCTGACAA
____________________________________________________________
consensus CTACGGTTGGCTGTCCTTTTTCAAGCTTATTAAGTACAACTTGCCATTTAAAGCTGACAA
. : . : . : . : . : . :
JMFF012J16- GAGGCCATACTATGATTATACTGGCCTTTGGCTCATATATGGGCTGCTGGCTATGAACTC
JMFF031J02- GAGGCCATACTATGATTATACTGGCCTTTGGCTCATATATGGGCTGCTGGCTATGAACTC
JMSF036P17- GAGGCCATACTATGATTATACTGGCCTTTGGCTCATATATGGGCTGCTGGCTATGAACTC
JMSF044P04- GAGGCCATACTATGATTATACTGGCCTTTGGCTCATATATGGGCTGCTGGCTATGAACTC
rJMSF044P04+ CCATACTATGATTATACTGGCCTTTGGCTCATATATGGGCTGCTGGCTATGAACTC
rJMSF036P17+ GAGGCCATACTATGATTATACTGGCCTTTGGCTCATATATGGGCTGCTGGCTATGAACTC
rJMFF012J16+ GAGGCCATACTATGATTATACTGGCCTTTGGCTCATATATGGGCTGCTGGCTATGAACTC
____________________________________________________________
consensus GAGGCCATACTATGATTATACTGGCCTTTGGCTCATATATGGGCTGCTGGCTATGAACTC
. : . : . : . : . : . :
JMFF012J16- ATGGCTCTGGAG
JMFF031J02- ATGGCTC
JMSF036P17- ATGGCTCTGGAGTGCTGTTT
JMSF044P04- ATGGCTCTGGAGTGCTGTTTTCCACAGCAGAGATGTGGATGTTACAGAAAAGTTAGACTA
rJMSF044P04+ ATGGCTCTGGAGTGCTGTTTTCCACAGCAGAGATGTGGATGTTACAGAAAAGTTAGACTA
rJMSF036P17+ ATGGCTCTGGAGTGCTGTTTTCCACAGCAGAGATGTGGATGTTACAGAAAAGTTAGACTA
rJMFF012J16+ ATGGCTCTGGAGTGCTGTTTTCCACAGCAGAGATGTGGATGTTACAGAAAAGTTAGACTA
____________________________________________________________
consensus ATGGCTCTGGAGTGCTGTTTTCCACAGCAGAGATGTGGATGTTACAGAAAAGTTAGACTA
. : . : . : . : . : . :
JMSF044P04- CTCATCTGCAGTTGCCTTACTTGGCTATTCGCTTATTCTGGCTATACTAA
rJMSF044P04+ CTCATCTGCAGTTGCCTTACTTGGCTATTCGCTTATTCTGGCTATACTAAGAAGTTTCAA
rJMSF036P17+ CTCATCTGCAGTTGCCTTACTTGGCTATTCGCTTATTCTGGCTATACTAAGAAGTTTCAA
rJMFF012J16+ CTCATCTGCAGTTGCCTTACTTGGCTATTCGCTTATTCTGGCTATACTAAGAAGTTTCAA
____________________________________________________________
consensus CTCATCTGCAGTTGCCTTACTTGGCTATTCGCTTATTCTGGCTATACTAAGAAGTTTCAA
. : . : . : . : . : . :
rJMSF044P04+ TGTGAGGGATGAGGCTGCCAGAGTGATGGTTTCTGCCCCAATTCTTGCTTTTATAACAAC
rJMSF036P17+ TGTGAGGGATGAGGCTGCCAGAGTGATGGTTTCTGCCCCAATTCTTGCTTTTATAACAAC
rJMFF012J16+ TGTGAGGGATGAGGCTGCCAGAGTGATGGTTTCTGCCCCAATTCTTGCTTTTATAACAAC
rJMFF050I24+ GAGGGATGAGGCTGCCAGAGTGATGGTTTCTGCCCCAATTCTTGCTTTTATAACAAC
____________________________________________________________
consensus TGTGAGGGATGAGGCTGCCAGAGTGATGGTTTCTGCCCCAATTCTTGCTTTTATAACAAC
. : . : . : . : . : . :
rJMSF044P04+ CCACATACTTTACCTGAACAATTATAAAATGGATTATGGATGGAACATGATGGTCTGTGT
rJMSF036P17+ CCACATACTTTACCTGAACAATTATAAAATGGATTATGGATGGAACATGATGGTCTGTGT
rJMFF012J16+ CCACATACTTTACCTGAACAATTATAAAATGGATTATGGATGGAACATGATGGTCTGTGT
rJMFF050I24+ CCACATACTTTACCTGAACAATTATAAAATGGATTATGGATGGAACATGATGGTCTGTGT
____________________________________________________________
consensus CCACATACTTTACCTGAACAATTATAAAATGGATTATGGATGGAACATGATGGTCTGTGT
. : . : . : . : . : . :
rJMSF044P04+ TGCCATGGGTGTGGCTCAACTTATGATTTGGGCAATCTGGGCAGGAATGAGTCGTCATCC
rJMSF036P17+ TGCCATGGGTGTGGCTCAACTTATGATTTGGGCAATCTGGGCAGGAATGA---GTCATCC
rJMFF012J16+ TGCCATGGGTGTGGCTCAACTTATGATTTGGGCAATCTGGGCAGGAATGAGTCGTCATCC
rJMFF048J18+ CAGGAATGAGTCGTCATCC
rJMFF031J02+ TTGGGCAATCTGGGCAGGANGGNGTNGTCATCC
rJMFF050I24+ TGCCATGGGTGTGGCTCAACTTATGATTTGGGCAATCTGGGCAGGAATGAGTCGTCATCC
____________________________________________________________
consensus TGCCATGGGTGTGGCTCAACTTATGATTTGGGCAATCTGGGCAGGAATGAGTCGTCATCC
. : . : . : . : . : . :
rJMSF044P04+ TTCTCGATTGAAGTTGTGGATTGTTGTGATTGGAGGTGGGCTTGCAATGCTCCTAGAGAT
rJMSF036P17+ TTCTCGATTGAAGTTGTGGATTGTTGTGATTGGAGGTGGGCTTGCAATGCTCCTAGAGAT
rJMFF012J16+ TTCTCGATTGAAGTTGTGGATTGTTGTGATTGGAGGTGGGCTTGCAATGCTCCTAGAGAT
rJMFF048J18+ TTCTCGATTGAAGTTGTGGATTGTTGTGATTGGAGGTGGGCTTGCAATGCTCCTAGAGAT
rJMFF031J02+ TTCTCGATTGAAGTTGTGGATTGTTGTGATTGGAGGTGGGCTTGCAATGCTCCTAGAGAT
rJMFF050I24+ TTCTCGATTGAAGTTGTGGATTGTTGTGATTGGAGGTGGGCTTGCAATGCTCCTAGAGAT
____________________________________________________________
consensus TTCTCGATTGAAGTTGTGGATTGTTGTGATTGGAGGTGGGCTTGCAATGCTCCTAGAGAT
. : . : . : . : . : . :
rJMSF044P04+ TTATGACTTCCCTCCATATCAAGGACTTGTAGATGCACATGCTCTTTGGCATGCCACCAC
rJMSF036P17+ TTATGACTTCCCTCCATATCAAGGACTTGTAGATGCACATGCTCTTTGGCATGCCACCAC
rJMFF012J16+ TTATGACTTCCCTCCATATCAAGGACTTGTAGATGCACATGCTCTTTGGCATGCCACCAC
rJMFF048J18+ TTATGACTTCCCTCCATATCAAGGACTTGTAGATGCACATGCTCTTTGGCATGCCACCAC
rJMFF031J02+ TTATGCCTTCCCTCCATATCAAGGACTTGTAGATGCACATGCTCTTTGGCATGCCACCAC
rJMFF050I24+ TTATGACTTCCCTCCATATCAAGGGCTTGTAGATGCACATGCTCTTTGGCATGCCACCAC
____________________________________________________________
consensus TTATGACTTCCCTCCATATCAAGGACTTGTAGATGCACATGCTCTTTGGCATGCCACCAC
. : . : . : . : . : . :
rJMSF044P04+ AATCCCCCTAACTTACCTATGGTGGAGTTTCATCCAGGACGATGCCAAGTTCCGAACATC
rJMSF036P17+ AATCCCCCTAACTTACCTATGGTGGAGTTTCATCCAGGACGATGCCAAGTTCCGAACATC
rJMFF012J16+ AATCCCCCTAACTTACCTATGGTGGAGTTTCATCCAGGACGATGCCAAGTTCCGAACATC
rJMFF048J18+ AATCCCCCTAACTTACCTATGGTGGAGTTTCATCCAGGACGATGCCAAGTTCCGAACATC
rJMFF031J02+ AATCCCCCTAACTTACCTATGGTGGAGTTTCATTCAGGACGATGCCAAGTTCCGAACATN
rJMFF050I24+ AATCCCCCTAACTTACCTATGGTGGAGTTTCATCCAGGACGATGCCAAGTTCCGAACATC
____________________________________________________________
consensus AATCCCCCTAACTTACCTATGGTGGAGTTTCATCCAGGACGATGCCAAGTTCCGAACATC
. : . : . : . : . : . :
rJMSF044P04+ TAACCTCCTCAAGAAGGCAAAATAGTGTTCCTCCAAGGGGCAATGATTCAACAAACAGTC
rJMSF036P17+ TAACCTCCTCAAGAAGGCAAAATAGTGTTCCTCCAAGGGGCAATGATTCAACAAACAGTC
rJMFF012J16+ TAACCTCCTCAAGAAGGCAAAATAGTGTTCCTCCAAGGGGCAATGATTCAACAAACAGTC
rJMFF048J18+ TAACCTCCTCAAGAAGGCAAAATAGTGTTCCTCCAAGGGGCAATGATTCAACAAACAGTC
rJMFF031J02+ TAACCTCCTCAAGAAGGCAAAATAGTGTTCCTCCAAGGGGCAATGATTCAACAAACAGTC
rJMFF050I24+ TAACCTCCTCAAGAAGGCAAAATAGTGTTCCTCCAAGGGGCAATGATTCAACAAACAGTC
____________________________________________________________
consensus TAACCTCCTCAAGAAGGCAAAATAGTGTTCCTCCAAGGGGCAATGATTCAACAAACAGTC
. : . : . : . : . : . :
rJMSF044P04+ CAAGCATTAGTTAGCATCACAAATTTTAGCAAACTTACGAGATTTCTTTGCTTATTTTTG
rJMSF036P17+ CAAGCATTAGTTAGCATCACAAATTTTAGCAAACTTACGAGATTTCTTTGCTTATTTTTG
rJMFF012J16+ CAAGCATTAGTTAGCATCACAAATTTTAGCAAACTTACGAGATTTCTTTGCTTATTTTTG
rJMFF048J18+ CAAGCATTAGTTAGCATCACAAATTTTAGCAAACTTACGAGATTTCTTTGCTTATTTTTG
rJMFF031J02+ CAAGCATTAGTTAGCATCACAAATTTTAGCAAACTTACGAGATTTCTTTGCTTATTTTTG
rJMFF050I24+ CAAGCATTAGTTAGCATCACAAATTTTAGCAAACTTACGAGATTTCTTTGCTTATTTTTG
____________________________________________________________
consensus CAAGCATTAGTTAGCATCACAAATTTTAGCAAACTTACGAGATTTCTTTGCTTATTTTTG
. : . : . : . : . : . :
rJMSF044P04+ TGAATGGAGGATGTTGTAATATTTTTTT
rJMSF036P17+ TGAATGGAGGATGTTGTAATATT
rJMFF012J16+ TGAATGGAGGATGTTGTAATATTTTTTTT
rJMFF048J18+ TGAATGGAGGATGTTGTAATATT-TTTTTTGTTTGGTTTGGATAGGAGAAGAACCTAGAA
rJMFF031J02+ TGAATGGAGGATGTTGTAATATTCTTTTTTGTTTGGTTTGGATAGGAGAAGAACCTAGAA
rJMFF050I24+ TGAATGGAGGATGTTGTAATATT-TTTTTTGTTTGGTTTGGATAGGAGAAGAACCTAGAA
____________________________________________________________
consensus TGAATGGAGGATGTTGTAATATTTTTTTTTGTTTGGTTTGGATAGGAGAAGAACCTAGAA
. : . : . : . : . : . :
rJMFF048J18+ TGTGCATGTTATGTTTGACACAAGTGACATTTCCATATCCTAAAGCTTTTTT
rJMFF031J02+ TGTGCATGTTATGTT
rJMFF050I24+ TGTGCATGTTATGTTTGACACAAGTGACATTTCCATATCCTAAAGCTTTTTTAAAATGCC
____________________________________________________________
consensus TGTGCATGTTATGTTTGACACAAGTGACATTTCCATATCCTAAAGCTTTTTTAAAATGCC