clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFN009J02 | Sequence | 459 | 002351 (8) | emb|CDO98878.1| | 2e-48 | unnamed protein product [Coffea canephora] | |||||
JMSF011J04 | Sequence | 278 | 002351 (8) | gb|AEC10964.1| | 5e-37 | 40S ribosomal protein s21e [Camellia sinensis] | 456 | 002351 (8) | emb|CDO98878.1| | 2e-48 | unnamed protein product [Coffea canephora] |
JMSF012J04 | Sequence | 459 | 002351 (8) | emb|CDO98878.1| | 2e-48 | unnamed protein product [Coffea canephora] | |||||
JMSF035E08 | Sequence | 589 | 002351 (8) | emb|CDO98878.1| | 1e-47 | unnamed protein product [Coffea canephora] | 528 | 002351 (8) | emb|CDO98878.1| | 6e-48 | unnamed protein product [Coffea canephora] |
JMSF035K18 | Sequence | 589 | 002351 (8) | emb|CDO98878.1| | 1e-47 | unnamed protein product [Coffea canephora] | 528 | 002351 (8) | emb|CDO98878.1| | 6e-48 | unnamed protein product [Coffea canephora] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig002351============================================ 589 62 --------------------------------------------------------------------------------------------------->JMSF035E08 <-----------------------------------------------------------------------------------------rJMSF035E08 62 --------------------------------------------------------------------------------------------------->JMSF035K18 <-----------------------------------------------------------------------------------------rJMSF035K18 136 ---------------------------------------------->JMSF011J04 <----------------------------------------------------------------------------rJMSF011J04
The following clones don't have the opposite end in this pair.
<----------------------------------------------------------------------------rJMSF012J04- ----------------------------------------------------------------------------->JMFN009J02-