clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMSF035H09 | Sequence | 675 | 008619 (8) | ref|XP_009610796.1| | 2e-96 | PREDICTED: chloroplastic group IIB intron splicing facilitator CRS2-B, chloropl | 688 | 008619 (8) | ref|XP_009794133.1| | 6e-137 | PREDICTED: chloroplastic group IIB intron splicing facilitator CRS2, chloroplas |
JMSF041G10 | Sequence | 780 | 008619 (8) | ref|XP_009610796.1| | 3e-113 | PREDICTED: chloroplastic group IIB intron splicing facilitator CRS2-B, chloropl | 753 | 008619 (8) | ref|XP_009794133.1| | 1e-136 | PREDICTED: chloroplastic group IIB intron splicing facilitator CRS2, chloroplas |
JMSF042G10 | Sequence | 647 | 008619 (8) | ref|XP_009610796.1| | 1e-75 | PREDICTED: chloroplastic group IIB intron splicing facilitator CRS2-B, chloropl | 798 | 008619 (8) | ref|XP_009610796.1| | 6e-140 | PREDICTED: chloroplastic group IIB intron splicing facilitator CRS2-B, chloropl |
JMSF052P07 | Sequence | 678 | 008619 (8) | ref|XP_009610796.1| | 5e-77 | PREDICTED: chloroplastic group IIB intron splicing facilitator CRS2-B, chloropl | 881 | 008619 (8) | ref|XP_009610796.1| | 7e-142 | PREDICTED: chloroplastic group IIB intron splicing facilitator CRS2-B, chloropl |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig008619============================================1065 45 --------------------------------------------------------------->JMSF052P07 <----------------------------------------------------------------------------------rJMSF052P07 56 ------------------------------------------------------------>JMSF042G10 <--------------------------------------------------------------------------rJMSF042G10 56 ------------------------------------------------------------------------>JMSF041G10 <----------------------------------------------------------------------rJMSF041G10 230 -------------------------------------------------------->JMSF035H09 <---------------------------------------------------------------rJMSF035H09
The following clones don't have the opposite end in this pair.