clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF001B12 | Sequence | 542 | 013589 (8) | gb|KDO87500.1| | 1e-48 | hypothetical protein CISIN_1g027319mg [Citrus sinensis] | 744 | 013589 (8) | ref|XP_002320387.2| | 2e-71 | hypothetical protein POPTR_0014s13350g [Populus trichocarpa] gb|EEE98702.2| hypo |
JMFF015B20 | Sequence | 590 | 013589 (8) | ref|XP_010242542.1| | 189 | PREDICTED: uncharacterized protein LOC104586868 [Nelumbo nucifera] | 604 | 013589 (8) | ref|XP_009764088.1| | 206 | PREDICTED: uncharacterized protein LOC104215861 [Nicotiana sylvestris] |
JMSF003G08 | Sequence | 427 | 013589 (8) | ref|XP_010242542.1| | 76.3 | PREDICTED: uncharacterized protein LOC104586868 [Nelumbo nucifera] | 728 | 013589 (8) | ref|XP_002273337.1| | 241 | PREDICTED: uncharacterized protein LOC100240873 [Vitis vinifera] emb|CBI32315.3| |
JMSF045L06 | Sequence | 612 | 013589 (8) | ref|XP_010242542.1| | 207 | PREDICTED: uncharacterized protein LOC104586868 [Nelumbo nucifera] | 803 | 013589 (8) | ref|XP_002273337.1| | 263 | PREDICTED: uncharacterized protein LOC100240873 [Vitis vinifera] emb|CBI32315.3| |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig013589============================================1102 18 ------------------------------------------------>JMFF001B12 <-------------------------------------------------------------------rJMFF001B12 198 ----------------------------------------------------->JMFF015B20 <---------------------------------------------rJMFF015B20 198 ------------------------------------------------------->JMSF045L06 <----------------------------------------------------------------rJMSF045L06 215 ------------------------------------>JMSF003G08 <---------------------------------------------------rJMSF003G08
The following clones don't have the opposite end in this pair.