| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF001B12 | Sequence | 542 | 013589 (8) | gb|KDO87500.1| | 1e-48 | hypothetical protein CISIN_1g027319mg [Citrus sinensis] | 744 | 013589 (8) | ref|XP_002320387.2| | 2e-71 | hypothetical protein POPTR_0014s13350g [Populus trichocarpa] gb|EEE98702.2| hypo |
| JMFF015B20 | Sequence | 590 | 013589 (8) | ref|XP_010242542.1| | 189 | PREDICTED: uncharacterized protein LOC104586868 [Nelumbo nucifera] | 604 | 013589 (8) | ref|XP_009764088.1| | 206 | PREDICTED: uncharacterized protein LOC104215861 [Nicotiana sylvestris] |
| JMSF003G08 | Sequence | 427 | 013589 (8) | ref|XP_010242542.1| | 76.3 | PREDICTED: uncharacterized protein LOC104586868 [Nelumbo nucifera] | 728 | 013589 (8) | ref|XP_002273337.1| | 241 | PREDICTED: uncharacterized protein LOC100240873 [Vitis vinifera] emb|CBI32315.3| |
| JMSF045L06 | Sequence | 612 | 013589 (8) | ref|XP_010242542.1| | 207 | PREDICTED: uncharacterized protein LOC104586868 [Nelumbo nucifera] | 803 | 013589 (8) | ref|XP_002273337.1| | 263 | PREDICTED: uncharacterized protein LOC100240873 [Vitis vinifera] emb|CBI32315.3| |
This contig is upended
. : . : . : . : . : . :
JMFF015B20- GAAGAATGCAATGAAATTGCTA
JMFF001B12- GCTA
JMSF003G08- GCTA
JMSF045L06- GAAGAATGCAATGAAATTGCTA
____________________________________________________________
consensus GAAGAATGCAATGAAATTGCTA
. : . : . : . : . : . :
JMFF015B20- ACGGCTGCGACGCCATTACAATGCATGAGAGCTGAGTAGATATCTATTAGACGCCATGAA
JMFF001B12- ACGGCTGCGACGCCATTACAATGCATGAGAGCTGAGTAGATATCTATTAGACGCCATGAA
JMSF003G08- ACGGCTGCGACGCCATTACAATGCATGAGAGCTGAGTAGATATCTATTAGACGCCATGAA
JMSF045L06- ACGGCTGCGACGCCATTACAATGCATGAGAGCTGAGTAGATATCTATTAGACGCCATGAA
____________________________________________________________
consensus ACGGCTGCGACGCCATTACAATGCATGAGAGCTGAGTAGATATCTATTAGACGCCATGAA
. : . : . : . : . : . :
JMFF015B20- CGCCCTAATGTCTGCTGCATCTCCTTTTACCTCTATTTCCATCTTGAAGTTTCCTTCATC
JMFF001B12- CGCCCTAATGTCTGCTGCATCTCCTTTTACCTCTATTTCCATCTTGAAGTTTCCTTCATC
JMSF003G08- CGCCCTAATGTCTGCTGCATCTCCTTTTACCTCTATTTCCATCTTGAAGTTTCCTTCATC
JMSF045L06- CGCCCTAATGTCTGCTGCATCTCCTTTTACCTCTATTTCCATCTTGAAGTTTCCTTCATC
____________________________________________________________
consensus CGCCCTAATGTCTGCTGCATCTCCTTTTACCTCTATTTCCATCTTGAAGTTTCCTTCATC
. : . : . : . : . : . :
JMFF015B20- CCCTCTGGTTCTCAGAAATGGCGTCTTTAGGGCCCAATTTTGGGGGAAAAGCTCGAGATT
JMFF001B12- CCCTCTGGTTCTCAGAAATGGCGTCTTTAGGGCCCAATTTTGGGGGAAAAGCTCGAGATT
JMSF003G08- CCCTCTGGTTCTCAGAAATGGCGTCTTTAGGGCCCAATTTTGGGGGAAAAGCTCGAGATT
JMSF045L06- CCCTCTGGTTCTCAGAAATGGCGTCTTTAGGGCCCAATTTTGGGGGAAAAGCTCGAGATT
rJMSF045L06+ GAAAAGCTCGAGATT
____________________________________________________________
consensus CCCTCTGGTTCTCAGAAATGGCGTCTTTAGGGCCCAATTTTGGGGGAAAAGCTCGAGATT
. : . : . : . : . : . :
JMFF015B20- TCGAGCAAGCTCGAACGGATTGGATAAGAAGGTGGAGGAGGAAGGTTTAGGAGACTCTGC
JMFF001B12- TCGAGCAAGCTCGAACGGATTGGATAAGAAGGTGGAGGAGGAAGGTTTAGGAGACTCTGC
JMSF003G08- TCGAGCAAGCTCGAACGGATTGGATAAGAAGGTGGAGGAGGAAGGTTTAGGAGACTCTGC
JMSF045L06- TCGAGCAAGCTCGAACGGATTGGATAAGAAGGTGGAGGAGGAAGGTTTAGGAGACTCTGC
rJMSF045L06+ TCGAGCAAGCTCGAACGGATTGGATAAGAAGGTGGAGGAGGAAGGTTTAGGAGACTCTGC
____________________________________________________________
consensus TCGAGCAAGCTCGAACGGATTGGATAAGAAGGTGGAGGAGGAAGGTTTAGGAGACTCTGC
. : . : . : . : . : . :
JMFF015B20- AGAAACCAAAGTTGAAGATGAACAAGAAAGTAAAGGGGCAAACAGCATTTCTAATGGGGC
JMFF001B12- AGAAACCAAAGTTGAAGATGAACAAGAAAGTAAAGGGGCAAACAGCATTTCTAATGGAGC
JMSF003G08- AGAAACCAAAGTTGAAGATGAACAAGAAAGTAAAGGGGCAAACAGCATTTCTAATGGAGC
JMSF045L06- AGAAACCAAAGTTGAAGATGAACAAGAAAGTAAAGGGGCAAACAGCATTTCTAATGGAGC
rJMSF045L06+ AGAAACCAAAGTTGAAGATGAACAAGAAAGTAAAGGGGCAAACAGCATTTCTAATGGAGC
____________________________________________________________
consensus AGAAACCAAAGTTGAAGATGAACAAGAAAGTAAAGGGGCAAACAGCATTTCTAATGGAGC
. : . : . : . : . : . :
JMFF015B20- AGCATCCACTACTATCAACCCGGCACTCGATAAAGAACTGAAAAAGGTGGTTCAGAAGAC
JMFF001B12- AGCATCCACTACTATCAACCCGGCACTCGATAAAGAACTGAAAAAGGTGGTTCAGAAGAC
JMSF003G08- AGCATCCACTACTATCAACCCGGCACTCGATAAAGAACTGAAAAAGGTGGTTCAGAAGAC
JMSF045L06- AGCATCCACTACTATCAACCCGGCACTCGATAAAGAACTGAAAAAGGTGGTTCAGAAGAC
rJMSF045L06+ AGCATCCACTACTATCAACCCGGCACTCGATAAAGAACTGAAAAAGGTGGTTCAGAAGAC
rJMSF003G08+ ATCAACCCGGCACTCGATAAAGAACTGAAAAAGGTGGTTCAGAAGAC
rJMFF001B12+ ACTGAAAAAGGTGGTTCAGANGAC
____________________________________________________________
consensus AGCATCCACTACTATCAACCCGGCACTCGATAAAGAACTGAAAAAGGTGGTTCAGAAGAC
. : . : . : . : . : . :
JMFF015B20- TGCTGCAACTTTCGCACCGAGGGCTTCCACTGCTTCAAAAAATCCTGCTGTACCTGGAAC
JMFF001B12- TGCTGCAACTTTCGCACCGAGGGCTTCCACTGCTTCAAAAAATCCTGCTGTACCTGGAAC
JMSF003G08- TGCTGCAACTTTCGCACCGAGGGCTTCCACTGCTTCAAAAA
JMSF045L06- TGCTGCAACTTTCGCACCGAGGGCTTCCACTGCTTCAAAAAATCCTGCTGTACCTGGAAC
rJMSF045L06+ TGCTGCAACTTTCGCACCGAGGGCTTCCACTGCTTCAAAAAATCCTGCTGTACCTGGAAC
rJMFF015B20+ GGCTTCCACTGCTTCAAAAAATCCTGCTGTACCTGGAAC
rJMSF003G08+ TGCTGCAACTTTCGCACCGAGGGCTTCCACTGCTTCAAAAAATCCTGCTGTACCTGGAAC
rJMFF001B12+ TGCTGCANCTTTCGCACCGAGGGCTTCCACTGCTTCAAAAAATCCTGCTGTACCTGGAAC
____________________________________________________________
consensus TGCTGCAACTTTCGCACCGAGGGCTTCCACTGCTTCAAAAAATCCTGCTGTACCTGGAAC
. : . : . : . : . : . :
JMFF015B20- TACATTATATACCGTCTTTGAAGTCCAGGGCTACGTTTCANTGTTGCTGGGAGGGGCTCT
JMFF001B12- TACATTATATACCGTCTTTGAAGTCCAGGGCTACGTTTCAATGTTGCTGGGAGGGGCTCT
JMSF045L06- TACATTATATACCGTCTTTGAAGTCCAGGGCTACGTTTCAATGTTGCTGGGAGGGGCTCT
rJMSF045L06+ TACATTATATACCGTCTTTGAAGTCCAGGGCTACGTTTCAATGTTGCTGGGAGGGGCTCT
rJMFF015B20+ TACATTATATACCGTCTTTGAAGTCCAGGGCTACGTTTCAATGTTGCTGGGAGGGGCTCT
rJMSF003G08+ TACATTATATACCGTCTTTGAAGTCCAGGGCTACGTTTCAATGTTGCTGGGAGGGGCTCT
rJMFF001B12+ TACATTATATACCGTCTTTGAAGTCCAGGGCTACGTTTCAATGTTGCTGGGAGGGGCTCT
____________________________________________________________
consensus TACATTATATACCGTCTTTGAAGTCCAGGGCTACGTTTCAATGTTGCTGGGAGGGGCTCT
. : . : . : . : . : . :
JMFF015B20- CTCTTTCAATCTCATATTTCCGTCTAATGAACCAGACATCTGGAGACTGATGGGAATGTG
JMFF001B12- CTCTTTCAATCTCATATTTCCGTCTAATGAACCANACATCTGGAGACTGATGGGAATG
JMSF045L06- CTCTTTCAATCTCATATTTCCGTCTAATGAACCAGACATCTGGAGACTGATGGGAATGTG
rJMSF045L06+ CTCTTTCAATCTCATATTTCCGTCTAATGAACCAGACATCTGGAGACTGATGGGAATGTG
rJMFF015B20+ CTCTTTCAATCTCATATTTCCGTCTAATGAACCAGACATCTGGAGACTGATGGGAATGTG
rJMSF003G08+ CTCTTTCAATCTCATATTTCCGTCTAATGAACCAGACATCTGGAGACTGATGGGAATGTG
rJMFF001B12+ CTCTTTCAATCTCATATTTCCGTCTAATGAACCAGACATCTGGAGACTGATGGGAATGTG
____________________________________________________________
consensus CTCTTTCAATCTCATATTTCCGTCTAATGAACCAGACATCTGGAGACTGATGGGAATGTG
. : . : . : . : . : . :
JMFF015B20- GTCCATCTGGATGTTCACTATTCCATCC
JMSF045L06- GTCCATCTGGATGTTCACTATTCCATCCCTTCGGGCCCGAGACTGCTCAA
rJMSF045L06+ GTCCATCTGGATGTTCACTATTCCATCCCTTCGGGCCCGAGACTGCTCAAAGAATGAGAA
rJMFF015B20+ GTCCATCTGGATGTTCACTATTCCATCCCTTCGGGCCCGAGACTGCTCAAAGAATGAGAA
rJMSF003G08+ GTCCATCTGGATGTTCACTATTCCATCCCTTCGGGCCCGAGACTGCTCAAAGAATGAGAA
rJMFF001B12+ GTCCATCTGGATGTTCACTATTCCATCCCTTCGGGCCCGAGACTGCTCAAAGAATGAGAA
____________________________________________________________
consensus GTCCATCTGGATGTTCACTATTCCATCCCTTCGGGCCCGAGACTGCTCAAAGAATGAGAA
. : . : . : . : . : . :
rJMSF045L06+ AGAAGCACTCAATTATCTCTTTCTTCTTGTCCCACTGCTGAACATTATAGTCCCATTCTT
rJMFF015B20+ AGAAGCACTCAATTATCTCTTTCTTCTTGTCCCACTGCTGAACATTATAGTCCCATTCTT
rJMSF003G08+ AGAAGCACTCAATTATCTCTTTCTTCTTGTCCCACTGCTGAACATTATAGTCCCATTCTT
rJMFF001B12+ AGAAGCACTCAATTATCTCTTTCTTCTTGTCCCACTGCTGAACATTATAGTCCCATTCTT
____________________________________________________________
consensus AGAAGCACTCAATTATCTCTTTCTTCTTGTCCCACTGCTGAACATTATAGTCCCATTCTT
. : . : . : . : . : . :
rJMSF045L06+ CTGGAAATCCTTCGCTGTTGTTTGGTCAGTGGATATTGTGGCATTTTTTGGAATGTATGC
rJMFF015B20+ CTGGAAATCCTTCGCTGTTGTTTGGTCAGTGGATATTGTGGCATTTTTTGGAATGTATGC
rJMSF003G08+ CTGGAAATCCTTCGCTGTTGTTTGGTCAGTGGATATTGTGGCATTTTTTGGAATGTATGC
rJMFF001B12+ CTGGAAATCCTTCGCTGTTGTTTGGTCAGTGGATATTGTGGCATTTTTTGGAATGTATGC
____________________________________________________________
consensus CTGGAAATCCTTCGCTGTTGTTTGGTCAGTGGATATTGTGGCATTTTTTGGAATGTATGC
. : . : . : . : . : . :
rJMSF045L06+ ATGGAAGCTTGGATGGCTACAGAAAGAGTAAAGGTCCAGGGAAGAGAAGCAGCTTCTTTG
rJMFF015B20+ ATGGAAGCTTGGATGGCTACAGAAAGAGTAAAGGTCCAGGGAAGAGAAGCAGCTTCTTTG
rJMSF003G08+ ATGGAAGCTTGGATGGCTACAGAAAGAGTAAAGGTCCAGGGAAGAGAAGCAGCTTCTTTG
rJMFF001B12+ ATGGAAGCTTGGATGGCTACAGAAAGAGTAAAGGTCCAGGGAAGAGAAGCAGCTTCTTTG
____________________________________________________________
consensus ATGGAAGCTTGGATGGCTACAGAAAGAGTAAAGGTCCAGGGAAGAGAAGCAGCTTCTTTG
. : . : . : . : . : . :
rJMSF045L06+ TTTATGTTAAATGATTATTGGTTGGACCTGAAATCAACTTCCAGAGCTCATTTTTGGCCA
rJMFF015B20+ TTTATGTTAAATGATTATTGGTTGGACCTGAAATCAACTTCCAGAGCTCATTTTTGGCCA
rJMSF003G08+ TTTATGTTAAATGATTATTGGTTGGACCTGAAATCAACTTCCAGAGCTCATTTTTGGCCA
rJMFF001B12+ TTTATGTTAAATGATTATTGGTTGGACCTGAAATCAACTTCCAGAGCTCATTTTTGGCCA
____________________________________________________________
consensus TTTATGTTAAATGATTATTGGTTGGACCTGAAATCAACTTCCAGAGCTCATTTTTGGCCA
. : . : . : . : . : . :
rJMSF045L06+ GGACTGAAGGATCTTGATGAAAGAACGCATCCTCAATCAGAGT
rJMFF015B20+ GGACTGAAGGATCTTGATGAAAGAACGCATCCTCAATCAGAGT
rJMSF003G08+ GGACTGAAGGATCTTGATGAAAGAACGCATCCTCAATCAGAGT
rJMFF001B12+ GGACTGAAGGATCTTGATGAAAGAACGCATCCTCAATCAGAGTCTGGTCATTCAGGGATG
____________________________________________________________
consensus GGACTGAAGGATCTTGATGAAAGAACGCATCCTCAATCAGAGTCTGGTCATTCAGGGATG
. : . : . : . : . : . :
rJMFF001B12+ CATGGATGCTATGTACTTGTGTTTACTGTATTCGTGTCTTTTCTATAAAGTACATATACG
____________________________________________________________
consensus CATGGATGCTATGTACTTGTGTTTACTGTATTCGTGTCTTTTCTATAAAGTACATATACG
. : . : . : . : . : . :
rJMFF001B12+ CTTTTCCTGTATAGACGGTTTAATTTGAAATCTCTCATGCTAGCCAACTTTTACAAAGTG
____________________________________________________________
consensus CTTTTCCTGTATAGACGGTTTAATTTGAAATCTCTCATGCTAGCCAACTTTTACAAAGTG
. : . : . : . : . : . :
rJMFF001B12+ TTTAGTATACGGTTTAAAATCTAGCTAGATGACAGAACTAAAATTTATTGTTTCCCTTTT
____________________________________________________________
consensus TTTAGTATACGGTTTAAAATCTAGCTAGATGACAGAACTAAAATTTATTGTTTCCCTTTT