clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFN017L12 | Sequence | 526 | 002297 (14) | emb|CDY70033.1| | 1e-35 | BnaCnng66420D [Brassica napus] | |||||
JMFN029B16 | Sequence | 522 | 002297 (14) | emb|CDY70033.1| | 7e-35 | BnaCnng66420D [Brassica napus] | |||||
JMSF005C14 | Sequence | 320 | 002297 (14) | emb|CDY70033.1| | 3e-39 | BnaCnng66420D [Brassica napus] | 371 | 002297 (14) | emb|CDY70033.1| | 8e-37 | BnaCnng66420D [Brassica napus] |
JMSF025I19 | Sequence | 540 | 002297 (14) | emb|CDY70033.1| | 3e-38 | BnaCnng66420D [Brassica napus] | 485 | 002297 (14) | emb|CDY70033.1| | 2e-38 | BnaCnng66420D [Brassica napus] |
JMSF029F07 | Sequence | 436 | 002297 (14) | emb|CDY70033.1| | 1e-38 | BnaCnng66420D [Brassica napus] | 394 | 002297 (14) | emb|CDY70033.1| | 6e-39 | BnaCnng66420D [Brassica napus] |
JMSF041G02 | Sequence | 482 | 002297 (14) | ref|XP_002519426.1| | 2e-25 | o-methyltransferase, putative [Ricinus communis] gb|EEF42840.1| o-methyltransfer | 447 | 002297 (14) | ref|XP_002519426.1| | 1e-25 | o-methyltransferase, putative [Ricinus communis] gb|EEF42840.1| o-methyltransfer |
JMSF049L14 | Sequence | 540 | 002297 (14) | emb|CDY70033.1| | 3e-38 | BnaCnng66420D [Brassica napus] | 483 | 002297 (14) | emb|CDY70033.1| | 2e-38 | BnaCnng66420D [Brassica napus] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig002297============================================ 559 76 --------------------------------------------------------------------------------------------->JMSF049L14 <-------------------------------------------------------------------------------------rJMSF049L14 86 --------------------------------------------------------------------------------------------->JMSF025I19 <------------------------------------------------------------------------------------rJMSF025I19 126 ------------------------------------------------------------------------------------->JMSF041G02 <----------------------------------------------------------------------------rJMSF041G02 166 ---------------------------------------------------------------------------->JMSF029F07 <---------------------------------------------------------------------rJMSF029F07 177 -------------------------------------------------------->JMSF005C14 <-----------------------------------------------------------------rJMSF005C14
The following clones don't have the opposite end in this pair.
-------------------------------------------------------------------------------------------->JMFN029B16- --------------------------------------------------------------------------------------------->JMFN017L12- <---------------------------------------------------------------------rJMSF038B21* ------------------------------------------------------------------------------------------>JMSF018I18#