clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF020K21 | Sequence | 548 | 005174 (9) | ref|XP_004248072.1| | 5e-104 | PREDICTED: ubiquitin-conjugating enzyme E2 28-like [Solanum lycopersicum] ref|XP | 689 | 005174 (9) | ref|XP_004248072.1| | 3e-103 | PREDICTED: ubiquitin-conjugating enzyme E2 28-like [Solanum lycopersicum] ref|XP |
JMFF046F18 | Sequence | 505 | 005174 (9) | gb|KJB39134.1| | 2e-84 | hypothetical protein B456_007G025200, partial [Gossypium raimondii] | 471 | 005174 (9) | emb|CDP04038.1| | 1e-62 | unnamed protein product [Coffea canephora] |
JMFN025P01 | Sequence | 623 | 005174 (9) | gb|KJB39134.1| | 2e-103 | hypothetical protein B456_007G025200, partial [Gossypium raimondii] | |||||
JMSF025F09 | Sequence | 681 | 005174 (9) | ref|XP_004248072.1| | 3e-103 | PREDICTED: ubiquitin-conjugating enzyme E2 28-like [Solanum lycopersicum] ref|XP | 692 | 005174 (9) | ref|XP_004248072.1| | 3e-103 | PREDICTED: ubiquitin-conjugating enzyme E2 28-like [Solanum lycopersicum] ref|XP |
JMSF032E12 | Sequence | 621 | 005174 (9) | ref|XP_004248072.1| | 1e-103 | PREDICTED: ubiquitin-conjugating enzyme E2 28-like [Solanum lycopersicum] ref|XP | 682 | 005174 (9) | ref|XP_004248072.1| | 3e-103 | PREDICTED: ubiquitin-conjugating enzyme E2 28-like [Solanum lycopersicum] ref|XP |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig005174============================================ 700 34 ---------------------------------------------------------------------------------------->JMSF032E12 <----------------------------------------------------------------------------------------------rJMSF032E12 35 ----------------------------------------------------------------------------->JMFF020K21 <--------------------------------------------------------------------------------------rJMFF020K21 73 --------------------------------------------------------->JMFF046F18 <------------------------------------------------------------------rJMFF046F18 89 --------------------------------------------------------------------------------------->JMSF025F09 <--------------------------------------------------------------------------------------rJMSF025F09
The following clones don't have the opposite end in this pair.
---------------------------------------------------------------------------------------->JMFN025P01-