Contig 005174:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF020K21Sequence548005174 (9)ref|XP_004248072.1|5e-104PREDICTED: ubiquitin-conjugating enzyme E2 28-like [Solanum lycopersicum] ref|XP689005174 (9)ref|XP_004248072.1|3e-103PREDICTED: ubiquitin-conjugating enzyme E2 28-like [Solanum lycopersicum] ref|XP
JMFF046F18Sequence505005174 (9)gb|KJB39134.1|2e-84hypothetical protein B456_007G025200, partial [Gossypium raimondii]471005174 (9)emb|CDP04038.1|1e-62unnamed protein product [Coffea canephora]
JMFN025P01Sequence623005174 (9)gb|KJB39134.1|2e-103hypothetical protein B456_007G025200, partial [Gossypium raimondii]
JMSF025F09Sequence681005174 (9)ref|XP_004248072.1|3e-103PREDICTED: ubiquitin-conjugating enzyme E2 28-like [Solanum lycopersicum] ref|XP692005174 (9)ref|XP_004248072.1|3e-103PREDICTED: ubiquitin-conjugating enzyme E2 28-like [Solanum lycopersicum] ref|XP
JMSF032E12Sequence621005174 (9)ref|XP_004248072.1|1e-103PREDICTED: ubiquitin-conjugating enzyme E2 28-like [Solanum lycopersicum] ref|XP682005174 (9)ref|XP_004248072.1|3e-103PREDICTED: ubiquitin-conjugating enzyme E2 28-like [Solanum lycopersicum] ref|XP

Alignment

This contig is upended


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rJMFF046F18-                              ATTAATAATATAAATAAACATTTCTTGTTTTCCACAAATA
rJMSF025F09-                                                                CAAATA
JMSF025F09+                                                           TTTCCACAAATA
rJMFF020K21-                                                                CAAATA
rJMSF032E12-                                                                CAAATA
                      ____________________________________________________________
consensus                                 ATTAATAATATAAATAAACATTTCTTGTTTTCCACAAATA
 
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rJMFF046F18-          TTAGTCTAAACACAAGAAATTAAGAGCACAAATTTCTTTTGAAAGGTAATATTTCGCACT
rJMSF025F09-          TTAGTCTAAACACAAGAAATTAAGAGCACAAATTTCTTTTGAAAGGTAATATTTCGCACT
JMSF025F09+           TTAGTCTAAACACAAGAAATTAAGAGCACAAATTTCTTTTGAAAGGTAATATTTCGCACT
JMFN025P01+                        AAGAAATTAAGAGCACAAATTTCTTTGNAAAGGTAATATTTCGCACT
rJMFF020K21-          TTAGTCTAAACACAAGAAATTAAGAGCACAAATTTCTTTTGAAAGGTAATATTTCGCACT
rJMSF032E12-          TTAGTCTAAACACAAGAAATTAAGAGCACAAATTTCTTTTGAAAGGTAATATTTCGCACT
JMSF032E12+                                                  TGAAAGGTAATATTTCGCACT
                      ____________________________________________________________
consensus             TTAGTCTAAACACAAGAAATTAAGAGCACAAATTTCTTTTGAAAGGTAATATTTCGCACT
 
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rJMFF046F18-          ATTCTACACTTCTTCATTGCAATGGCTGATAGGACAGACAAATTTTATCTTTATACAAAT
rJMSF025F09-          ATTCTACACTTCTTCATTGCAATGGCTGATAGGACAGACAAATTTTATCTTTATACAAAT
JMSF025F09+           ATTCTACACTTCTTCATTGCAATGGCTGATAGGACAGACAAATTTTATCTTTATACAAAT
JMFN025P01+           ATTCTACACTTCTTCATTGCAATGGCTGATAGGACAGACAAATTTTATCTTTATACAAAT
rJMFF020K21-          ATTCTACACTTCTTCATTGCAATGGCTGATAGGACAGACAAATTTTATCTTTATACAAAT
JMFF020K21+                                                              TATACAAAT
rJMSF032E12-          ATTCTACACTTCTTCATTGCAATGGCTGATAGGACAGACAAATTTTATCTTTATACAAAT
JMSF032E12+           ATTCTACACTTCTTCATTGCAATGGCTGATAGGACAGACAAATTTTATCTTTATACAAAT
                      ____________________________________________________________
consensus             ATTCTACACTTCTTCATTGCAATGGCTGATAGGACAGACAAATTTTATCTTTATACAAAT
 
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rJMFF046F18-          TCAAACACACAATGGTCATTTTTAACCCATTGCATACTTTTGGGTCCAGCTCCTGGCAGT
rJMSF025F09-          TCAAACACACAATGGTCATTTTTAACCCATTGCATACTTTTGGGTCCAGCTCCTGGCAGT
JMSF025F09+           TCAAACACACAATGGTCATTTTTAACCCATTGCATACTTTTGGGTCCAGCTCCTGGCAGT
JMFN025P01+           TCAAACACACAATGGTCATTTTTAACCCATTGCATACTTTTGGGTCCAGCTCCTGGCAGT
rJMFF020K21-          TCAAACACACAATGGTCATTTTTAACCCATTGCATACTTTTGGGTCCAGCTCCTGGCAGT
JMFF020K21+           TCAAACACACAATGGTCATTTTTAACCCATTGCATACTTTTGGGTCCAGCTCCTGGCAGT
rJMSF032E12-          TCAAACACACAATGGTCATTTTTAACCCATTGCATACTTTTGGGTCCAGCTCCTGGCAGT
JMSF032E12+           TCAAACACACAATGGTCATTTTTAACCCATTGCATACTTTTGGGTCCAGCTCCTGGCAGT
                      ____________________________________________________________
consensus             TCAAACACACAATGGTCATTTTTAACCCATTGCATACTTTTGGGTCCAGCTCCTGGCAGT
 
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rJMFF046F18-          TGCTTCATACTTAGCCCTGTCTGTCTTGTACATATGGGCAATCTCCGGAACCAAGGGATC
rJMSF025F09-          TGCTTCATACTTAGCCCTGTCTGTCTTGTACATATGGGCAATCTCCGGAACCAAGGGATC
JMSF025F09+           TGCTTCATACTTAGCCCTGTCTGTCTTGTACATATGGGCAATCTCCGGAACCAAGGGATC
JMFN025P01+           TGCTTCATACTTAGCCCTGTCTGTCTTGTACATATGGGCAATCTCCGGAACCAAGGGATC
rJMFF020K21-          TGCTTCATACTTAGCCCTGTCTGTCTTGTACATATGGGCAATCTCCGGAACCAAGGGATC
JMFF046F18+              TTCATACTTAGCCCCGTCTGTCTTGTACATAT-GGCAATCTCCGGAACCAAGGGATC
JMFF020K21+           TGCTTCATACTTAGCCCTGTCTGTCTTGTACATATGGGCAATCTCCGGAACCAAGGGATC
rJMSF032E12-          TGCTTCATACTTAGCCCTGTCTGTCTTGTACATATGGGCAATCTCCGGAACCAAGGGATC
JMSF032E12+           TGCTTCATACTTAGCCCTGTCTGTCTTGTACATATGGGCAATCTCCGGAACCAAGGGATC
                      ____________________________________________________________
consensus             TGCTTCATACTTAGCCCTGTCTGTCTTGTACATATGGGCAATCTCCGGAACCAAGGGATC
 
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rJMFF046F18-          ATCAGGGTTTGGATCAGTTAGAAGTGAGCAGATTGAAAGCAAAACCTTGGAAATAGTCAA
rJMSF025F09-          ATCAGGGTTTGGATCAGTTAGAAGTGAGCAGATTGAAAGCAAAACCTTGGAAATAGTCAA
JMSF025F09+           ATCAGGGTTTGGATCAGTTAGAAGTGAGCAGATTGAAAGCAAAACCTTGGAAATAGTCAA
JMFN025P01+           ATCAGGGTTTGGATCAGTTAGAAGTGAGCAGATTGAAAGCAAAACCTTGGAAATAGTCAA
rJMFF020K21-          ATCAGGGTTTGGATCAGTTAGAAGTGAGCAGATTGAAAGCAAAACCTTGGAAATAGTCAA
JMFF046F18+           ATCAGGGTTNGGATCAGTTAGAAGTGAGCAGATTGAAAGCAAAACCTTGGAAATAGTCAA
JMFF020K21+           ATCAGGGTTTGGATCAGTTAGAAGTGAGCAGATTGAAAGCAAAACCTTGGAAATAGTCAA
rJMSF032E12-          ATCAGGGTTTGGATCAGTTAGAAGTGAGCAGATTGAAAGCAAAACCTTGGAAATAGTCAA
JMSF032E12+           ATCAGGGTTTGGATCAGTTAGAAGTGAGCAGATTGAAAGCAAAACCTTGGAAATAGTCAA
                      ____________________________________________________________
consensus             ATCAGGGTTTGGATCAGTTAGAAGTGAGCAGATTGAAAGCAAAACCTTGGAAATAGTCAA
 
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rJMFF046F18-          GGCAGGGCTCCATTGCTCCTTCAAGATGTCAAGGCAGATGCTACCATTGCTATTGATATT
rJMSF025F09-          GGCAGGGCTCCATTGCTCCTTCAAGATGTCAAGGCAGATGCTACCATTGCTATTGATATT
JMSF025F09+           GGCAGGGCTCCATTGCTCCTTCAAGATGTCAAGGCAGATGCTACCATTGCTATTGATATT
JMFN025P01+           GGCAGGGCTCCATTGCTCCTTCAAGATGTCAAGGCAGATGCTACCATTGCTATTGATATT
rJMFF020K21-          GGCAGGGCTCCATTGCTCCTTCAAGATGTCAAGGCAGATGCTACCATTGCTATTGATATT
JMFF046F18+           GGCAGGGCTCCATTGCTCCTTCAAGATGTCAAGGCAGATGCTACCATTGCTATTGATATT
JMFF020K21+           GGCAGGGCTCCATTGCTCCTTCAAGATGTCAAGGCAGATGCTACCATTGCTATTGATATT
rJMSF032E12-          GGCAGGGCTCCATTGCTCCTTCAAGATGTCAAGGCAGATGCTACCATTGCTATTGATATT
JMSF032E12+           GGCAGGGCTCCATTGCTCCTTCAAGATGTCAAGGCAGATGCTACCATTGCTATTGATATT
                      ____________________________________________________________
consensus             GGCAGGGCTCCATTGCTCCTTCAAGATGTCAAGGCAGATGCTACCATTGCTATTGATATT
 
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rJMFF046F18-          GGGATGAAAAACTTTTGTTCTAAAAGCCACCTTTGGAGGTTTGAAAGGATAATCAGGGGG
rJMSF025F09-          GGGATGAAAAACCTTTGTTCTAAAAGCCACCTTTGGAGGTTTGAAAGGATAATCAGGGGG
JMSF025F09+           GGGATGAAAAACCTTTGTTCTAAAAGCCACCTTTGGAGGTTTGAAAGGATAATCAGGGGG
JMFN025P01+           GGGATGAAAAACTTTTGTTCTAAAAGCCACCTTTGGAGGTTTGAAAGGATAATCAGGGGG
rJMFF020K21-          GGGATGAAAAACTTTTGTTCTAAAAGCCACCTTTGGAGGTTTGAAAGGATAATCAGGGGG
JMFF046F18+           GGGATGAAAAACTTTTGTTCTAAAAGCCACCTTTGGAGGTTTGAAAGGATAATCAGGGGG
JMFF020K21+           GGGATGAAAAACTTTTGTTCTAAAAGCCACCTTTGGAGGTTTGAAAGGATAATCAGGGGG
rJMSF032E12-          GGGATGAAAAACTTTTGTTCTAAAAGCCACCTTTGGAGGTTTGAAAGGATAATCAGGGGG
JMSF032E12+           GGGATGAAAAACTTTTGTTCTAAAAGCCACCTTTGGAGGTTTGAAAGGATAATCAGGGGG
                      ____________________________________________________________
consensus             GGGATGAAAAACTTTTGTTCTAAAAGCCACCTTTGGAGGTTTGAAAGGATAATCAGGGGG
 
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rJMFF046F18-          GAAATGAATAG                                                 
rJMSF025F09-          GAAATGAATAGTGACCAAAAACACACCCCCTGCATAAGGACTATCTGGGGGACCCATTAT
JMSF025F09+           GAAATGAATAGTGACCAAAAACACACCCCCTGCATAAGGACTATCTGGGGGACCCATTAT
JMFN025P01+           GAAATGAATAGTGACCAAAAACACACCCCCTGCATAAGGACTATCTGGGGGACCCATTAT
rJMFF020K21-          GAAATGAATAGTGACCAAAAACACACCCCCTGCATAAGGACTATCTGGGGGACCCATTAT
JMFF046F18+           GAAATGAATAGTGACCAAAAACACACCCCCTGCATAAGGACTATCTGGGGGACCCATTAT
JMFF020K21+           GAAATGAATAGTGACCAAAAACACACCCCCTGCATAAGGACTATCTGGGGGACCCATTAT
rJMSF032E12-          GAAATGAATAGTGACCAAAAACACACCCCCTGCATAAGGACTATCTGGGGGACCCATTAT
JMSF032E12+           GAAATGAATAGTGACCAAAAACACACCCCCTGCATAAGGACTATCTGGGGGACCCATTAT
                      ____________________________________________________________
consensus             GAAATGAATAGTGACCAAAAACACACCCCCTGCATAAGGACTATCTGGGGGACCCATTAT
 
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rJMSF025F09-          GGTAGCTTGCCAATGAAACATGTCTTCACCAACAGGTCCAGCGCTGCAAGAGGTAGGAGG
JMSF025F09+           GGTAGCTTGCCAATGAAACATGTCTTCACCAACAGGTCCAGCGCTGCAAGAGGTAGGAGG
JMFN025P01+           GGTAGCTTGCCAATGAAACATGTCTTCACCAATAGGTCCAGCGCTGCAAGAGGTAGGAGG
rJMFF020K21-          GGTAGCTTGCCAATGAAACATGTCTTCACCAACAGGTCCAGCGCTGCAAGAGGTAGGAGG
JMFF046F18+           GGTAGCTTGCCAATGAAACATGTCTTCACCAACAGGTCCAGCGCTGCAAGAGGTAGGAGG
JMFF020K21+           GGTAGCTTGCCAATGAAACATGTCTTCACCAACAGGTCCAGCGCTGCAAGAGGTAGGAGG
rJMSF032E12-          GGTAGCTTGCCAATGAAACATGTCTTCACCAACAGGTCCAGCGCTGCAAGAGGTAGGAGG
JMSF032E12+           GGTAGCTTGCCAATGAAACATGTCTTCACCAACAGGTCCAGCGCTGCAAGAGGTAGGAGG
                      ____________________________________________________________
consensus             GGTAGCTTGCCAATGAAACATGTCTTCACCAACAGGTCCAGCGCTGCAAGAGGTAGGAGG
 
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rJMSF025F09-          ATCTTTCTGGAGATCCTTGAGCTCCTTCAAGATTCGTTTCGAAGCCATAGCTCAAAACAA
JMSF025F09+           ATCTTTCTGGAGATCCTTGAGCTCCTTCAAGATTCGTTTCGAAGCCATAGCTCAAAACAA
JMFN025P01+           ATCTTTCTGGAGATCCTTGAGCTCCTTCAAGATTCGTTTCGAAGCCATAGCTCAAAACAA
rJMFF020K21-          ATCTTTCTGGAGATCCTTGAGCTCCTTCAAGATTCGTTTCGAAGCCATAGCTCAAAACAA
JMFF046F18+           ATCTTTCTGGAGATCCTTGAGCTCCTTCAAGATTCGTTTCGAAGCCAT            
JMFF020K21+           ATCTTTCTGGAGATCCTTGAGCTCCTTCAAGATTCGTTTCGAAGCCATAGCTCAAAACAA
rJMSF032E12-          ATCTTTCTGGAGATCCTTGAGCTCCTTCAAGATTCGTTTCGAAGCCATAGCTCAAAACAA
JMSF032E12+           ATCTTTCTGGAGATCCTTGAGCTCCTTCAAGATTCGTTTCGAAGCCATAGCTCAAAACAA
                      ____________________________________________________________
consensus             ATCTTTCTGGAGATCCTTGAGCTCCTTCAAGATTCGTTTCGAAGCCATAGCTCAAAACAA
 
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rJMSF025F09-          CCTGA                                                       
JMSF025F09+           CCTGA                                                       
JMFN025P01+           CCTGATAAGAGATTCGAGATTGGAAGCTATTTGCCG                        
rJMFF020K21-          CCTGA                                                       
JMFF020K21+           CCTGATAAGAGATTCGAGATTGGAAGCTATTTGCCGATTTGTTGTTTTCTTCTTTCCTT 
rJMSF032E12-          CCTGATAAGAGATTCGAGATTGGAAGCTATTTGCCGATTTGTTGTTTTCTTCTTTCCTT 
JMSF032E12+           CCTGATAAGAGATTCGAGATTGGAAGCTATTTGCCGATTTGTTGTTTTCTTCTTTCCTTC
                      ____________________________________________________________
consensus             CCTGATAAGAGATTCGAGATTGGAAGCTATTTGCCGATTTGTTGTTTTCTTCTTTCCTTC