clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF008L19 | Sequence | 617 | 010859 (6) | ref|XP_009600613.1| | 6e-88 | PREDICTED: probable protein phosphatase 2C 10 [Nicotiana tomentosiformis] | 548 | 010859 (6) | gb|KEH31214.1| | 2e-16 | protein phosphatase 2C-like protein [Medicago truncatula] |
JMSF002L11 | Sequence | 333 | 010859 (6) | emb|CDO97445.1| | 7e-66 | unnamed protein product [Coffea canephora] | 649 | 010859 (6) | ref|XP_007159112.1| | 5e-19 | hypothetical protein PHAVU_002G209700g [Phaseolus vulgaris] gb|ESW31106.1| hypot |
JMSF042D17 | Sequence | 744 | 010859 (6) | ref|XP_009600613.1| | 7e-89 | PREDICTED: probable protein phosphatase 2C 10 [Nicotiana tomentosiformis] | 734 | 010859 (6) | ref|XP_007159112.1| | 4e-40 | hypothetical protein PHAVU_002G209700g [Phaseolus vulgaris] gb|ESW31106.1| hypot |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig010859============================================1474 14 ------------------------------------------------->JMSF042D17 <------------------------------------------------rJMSF042D17 118 ----------------------------------------->JMFF008L19 <------------------------------------rJMFF008L19 461 ---------------------->JMSF002L11 <------------------------------------------rJMSF002L11
The following clones don't have the opposite end in this pair.